Meriones unguiculatus (Mongolian gerbil): 110565165
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Entry
110565165 CDS
T05884
Symbol
Pcdh15
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16500
protocadherin-15
Organism
mun
Meriones unguiculatus (Mongolian gerbil)
Brite
KEGG Orthology (KO) [BR:
mun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mun03037
]
110565165 (Pcdh15)
04515 Cell adhesion molecules [BR:
mun04515
]
110565165 (Pcdh15)
Cilium and associated proteins [BR:
mun03037
]
Primary cilia and associated proteins
USH complex and associated proteins
110565165 (Pcdh15)
Cell adhesion molecules [BR:
mun04515
]
Cadherins
Protocadherins
110565165 (Pcdh15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
ECD
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
110565165
NCBI-ProteinID:
XP_060225350
LinkDB
All DBs
Position
16:complement(11584876..13047779)
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AA seq
1904 aa
AA seq
DB search
MFPQSALWKCLPRGILIASILAVSWGQYDDDCKLARGGPPATIVAIDEESRNGTIVVDNM
LIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQC
TNKKVGTVIYHEVRIVVRDRNDNSPEFKHESYYATVNELTPVGTTIFTGFSGDNGATDID
DGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIVQANDRAQN
LNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPVTYQAVIPELRTPEELNPILV
TPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFYMDPRTAEITLLEPVNRDFHQK
FDLVIKAEQDNGHPLPAFASLHIEILDENNQSPYFTMPSYQGYILESAPVGATISESVNL
TTPLRIVALDKDIEDTKDPELHLFLNDYTSVFTVTPTGITRYLTLLQPVDREEQQTYTFL
ITAFDGVQESKPVVVNIRVMDANDNTPTFPEISYDVFVYTDMSPGDSVIQLTAVDADEGS
NGEISYEILAGAQGDFVINRTTGLVSIAPGVELIVGRTYALTVQASDNAPPAERRHSICT
VYIEVLPPNNQSPPRFPQLLYSLEVSEAMRIGAVLLNLQATDREGDPITYAIENGDPQRV
FNLSETTGILTLGKALDRESTDRYILIVTASDGRPGGTSTATVNVVVTDVNDNAPVFDPY
LPRNLSVVEEEANAFVGQVRATDPDAGINGQVHYSLGNFNNLFRITSNGSIYTAVKLNRE
VRDRYELVVVATDGAVHPRHSTLTLYIKVLDIDDNSPVFTNSTYTVVVEENLPAGTTFLQ
VEAKDVDLGANVSYRIRSPEVKHLFALHPFTGELSLLRSLDYEAFPDQEASITFLVEAFD
IYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTVYAEDADPPGLPA
SRVRYRVDDVQFPYPASIFDVEEDSGRVITRVNLNEEPTTIFKLVVVAFDDGEPVMSSSA
TVRILVLHPGEIPRFTQEEYRPPPVSELATRGTVVGVISAAAINQSIVYSIVAGNEEDKF
GINNVTGVIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTAKVYIEIRDENDH
PPVFQKKFYIGGVSEDARMFTSVFRVKATDRDTGNYSAMAYRLIIPPIKEGKEGFVVETY
TGLVKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDMQVIVSNVPPTLV
EKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYSKCDLTVYAIDPQTNRA
IDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGESLGYTEGALLAL
AFIIILCCIPAILVVLVSYRQRQAECTKTARIQSAMPAAKPAAPVPAAPPPPPPPGAHLY
EELGESAILFLLYHFEQSRGNNSVPEDRTSHQDGMAFSSSTTESHEPAHVEGPLKDSQPN
PTRTFSFLPDEDDLSTHNPLYMESVGQRSTDSGLSPLRTDFEELFSPRPQVKSQSLRGPR
EKIQRVWHQSVNFPRRLLWKAPNRPETIDLMEWQVTRQRVERQSARSHPPRKGTEDAHGP
GKERGPRDTLSIQQAEQGTPLSSGSSFSSSWSHFSFSTLPTISRAVELRSEPSVVTSPAD
CTLELSPPPRPGGVNSLGSKRETPSWALDKETERNSLELVPHPPNIPSSLAQPPPPPAAF
TALPLPLSPPPRLLTFPISGPPPSSLPPPPPSLPPLPRPPAPRPFPPPPSSSSVCTARVT
RARETASSTSARPPASKALCDVAPHRHPKGILRHVTNLAALEKSVSNMYSHIEKNCPPAG
LPNPHTLCPPKETDVEGTCDQSQGGLVRVVEGIDQQPHSQSTSL
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atgttcccacagtcggctctctggaagtgcttaccacgggggatcctcatcgcctccatc
ttggccgtcagctggggccagtatgatgatgattgcaaactagctagaggaggaccacca
gctaccatcgtggccattgacgaagagagtcggaatggtacaattgtggtggacaacatg
ttgattaaggggactgctggaggaccggaccccaccatagaactctccctgaaggacaac
gtggactactgggtgctgctggaccccgtgaaacagatgcttttcctgaacagtaccgga
agagtgctggatcgagacccaccaatgaacatacactccatcgtggtgcaggtccagtgt
accaacaagaaggtcggcacggtcatctaccatgaagtgcgcatcgtggtgagggacagg
aatgacaactcacccgaattcaagcacgaaagctactatgccacagtgaacgagctcact
ccagttggcacgacaatattcacagggttttcaggagacaatggagctacagacatagac
gatggccctaatggacagatagaatatgtcattcagtacaacccagaagatccgacatcc
aatgacacctttgaaatcccgctcatgttgaccggaaacgtggtgctgagaaaaagactc
aactacgaagacaagactcgctactacgtcatcgtccaagctaacgatcgtgcccaaaat
ctgaatgagaggcgaacgaccaccaccaccctcacggttgatgttctggatggagacgac
ctgggacccatgtttctgccctgcgttcttgtgccaaacactcgggactgccgccccgtc
acctaccaagccgtcatccctgaactgaggactccggaagaactgaaccctattttggtg
accccacctatccaagccattgatcaggaccgaaacatccaaccaccatcagatcgacct
ggcatcctctactccatccttgtcggcacccctgaggattacccgcgcttcttctacatg
gatcccaggaccgcagaaatcactcttctggagccagtaaacagagacttccatcaaaaa
tttgatttggttattaaggctgaacaggacaatggccacccacttccagcctttgctagt
ttacatattgaaattctggatgaaaacaaccagagcccatatttcacaatgcccagctat
cagggatacatcctggagtctgcccctgtgggagccaccatctctgagagcgtgaactta
accacacctctgagaattgtagccctggacaaagacatcgaagacacgaaagatccggaa
ctccaccttttcctcaatgactatacctcagtcttcaccgtcacacccactggcatcacc
cgctaccttaccctgcttcaacccgtggacagagaggagcagcaaacatatacctttctg
ataacagcatttgatggtgtacaagaaagcaaaccagtcgtggtcaatatccgagtgatg
gatgcaaatgataacaccccaacctttcctgagatctcctatgatgtctttgtgtacaca
gacatgagtcctggggatagtgtcattcagctgacagcagtcgacgccgatgaaggctcc
aatggggagatctcctacgaaatcctggcgggagcccagggggacttcgtgatcaacagg
accacggggctggtgagcattgctcccggagtggagctgatcgtgggacggacctacgcg
ctgacagtacaggcctcggacaacgccccgcctgcagagagaagacactccatctgcacc
gtatacatcgaggtcctgccccccaacaaccagagcccgccccgcttcccgcagctgctg
tacagcctggaagtcagcgaggccatgaggatcggcgccgtcttgctaaacctgcaggcc
acagatcgagagggagacccaatcacatatgccatcgagaacggagaccctcagcgggtt
tttaatctttcggaaaccactgggattctcacgctagggaaggcgctagacagggagagc
acggatcgctacatcctcattgtcacagcctcggatggcaggccaggcgggacttcaacg
gccactgtgaatgtggtggtgacagatgtcaacgacaatgctcctgtgttcgatccctat
ctgcccaggaatctctccgtggtggaggaagaggccaacgcctttgtgggtcaagtaagg
gccacagacccagacgccggcataaacggccaagtgcactacagcctgggaaacttcaac
aacctcttccgcatcacgtccaacgggagcatttacacggccgtgaagctgaacagggaa
gtcagggaccgctacgagctggtggtcgtggcaacggacggagcggtgcaccctcgacac
tccaccctgacgctgtacatcaaagtgttggacattgacgacaacagccctgttttcacc
aattcgacgtacacggtcgtggttgaagagaatctgcccgccgggaccaccttccttcaa
gtagaggctaaggatgtcgacctaggagcaaatgtgtcatatcggatcagaagccccgaa
gtgaagcacctttttgcactgcatccatttaccggagaattgtcccttttgaggagcttg
gattacgaagcctttcctgaccaggaagcaagcatcacattcttggtggaggcctttgat
atttacgggacaatgccaccgggcatagcgacagtcacagtgattgtgaaggacatgaac
gactaccctccggtgttcagcaaacgcatctacaaggggatggtggctccggatgccgtc
aaggggacacccatcaccaccgtctatgctgaagacgcagacccgcctggtttgcctgca
agtcgggtgaggtatagagtggatgatgtgcagtttccataccctgccagcatttttgat
gtagaagaagattccggaagagtaataactcgtgtcaatcttaatgaagagcctacaaca
atttttaagctggtggttgtggcttttgatgatggagagcctgtgatgtccagcagcgcc
accgtgagaattcttgtcttacatcctggggagatcccacgcttcacccaagaggaatat
agacctcctcctgtaagcgagcttgccaccagagggactgttgttggagtcatttctgct
gccgccataaatcagagcatcgtgtactccatcgtggcaggaaatgaggaagataagttt
ggaatcaacaatgtcacaggcgtcatctacgtgaatggtcctttggattatgagacaagg
accagctacgtgcttcgggtgcaagcagattcgctggaagtggtcctcgccaatctccgg
gtcccctcaaaaagcaatacagctaaagtgtacattgagattcgggatgaaaacgaccac
ccgcccgtgttccagaagaaattctacattggaggtgtgtctgaagacgcgaggatgttc
acgtctgtgttcagagtgaaggccaccgacagggacacgggcaactatagtgccatggcc
tacaggctcatcataccacctattaaagagggcaaagaggggtttgtggtggaaacgtac
acagggctcgtcaagacagccatgctcttccacaacatgaggagatcctacttcaagttt
caagtgattgcaacggacgactacgggaaggggttaagcgggaaagctgatgttctggtc
tcggtggtcaatcagctggatatgcaggtgattgtctccaacgtgcccccaacgttagtg
gagaagaagattgaagatcttacagagattttggatcgctatgtccaggagcaaattccc
ggtgccaaggttgtggtggagtccataggtgcccgccgccatggagacgccttctcccta
gaagactatagcaagtgtgacctgacggtctatgccatcgacccccagaccaacagagcc
attgacagaaatgagctttttaaattcctggatggcaaactgctcgatatcaataaggat
tttcagccgtattacggggaaggagggcgcattctggagatccggactcccgaggcggtg
acaagcatcaagaagcgaggagagagtttggggtacacggagggggccttgctggccttg
gccttcatcatcatcctgtgctgcataccagccatcttggttgtcctagtgagctaccga
caacgccaggctgagtgcacgaagacagcgagaatccagtctgccatgcccgcggccaaa
cctgcagcccccgtgcctgcggcacccccaccgccaccacccccaggagcacatctctac
gaggagctgggagagagcgccattcttttccttctctaccattttgaacaaagcagggga
aataactcagtcccagaagacaggaccagtcaccaagatgggatggccttttcttccagt
accactgagtctcatgagccagctcatgtagagggaccacttaaggacagccagcctaac
ccaacaaggacgttctcatttctccccgatgaggatgatttaagcacccacaaccccctt
tatatggagagcgtaggtcaaaggtcaacagattcgggcctttcgccgctgaggacagat
tttgaagagctgttttcacccagaccacaagttaagagccagtctctgaggggcccgaga
gaaaagatccagagggtgtggcaccagtccgtgaactttccaaggcggctgctgtggaaa
gctcccaacaggccagagaccatagacctgatggagtggcaggtcaccaggcagagagtt
gaacgccagagcgccaggtcccacccaccccggaaaggtaccgaagatgcccatgggcca
gggaaggaaaggggaccccgagacaccctgagcatccagcaggcagagcaggggacaccc
ctgtcttcgggctcctccttctcctcctcttggtctcacttctcattctcaaccctgcca
accatttctagagccgtggaactccggtcagagcccagtgtggtcacctctcccgctgac
tgcaccctggaactttctcctcctccgaggcccggtggtgtaaattccctgggctctaag
agagagactcccagttgggctttagacaaggaaacggaaagaaactctttagagttggtt
ccccatcctcctaacatcccttcctccctggcacagcctcctccacctcctgctgccttc
actgccctccctctccccctctctcctcctccccgtcttcttacatttcccatctctggc
ccccctccttcttccctgcctcctccaccaccatcccttcctcctcttccgcggcctcca
gccccacgccccttcccaccgcctccctcatcctcttcagtgtgcaccgcccgggtcaca
cgcgccagagaaactgcatcctccacgagcgcaaggccaccagcatccaaagcgctgtgt
gacgtggcgccccacagacacccgaaggggatcctcaggcacgtgaccaacctggcagca
ctcgagaagtcggtgtccaacatgtacagtcacatagagaagaactgcccgcccgcaggg
ctcccgaacccccacacgctctgccccccaaaggaaacggacgtggaaggcacgtgtgac
cagagccagggaggactggtcagggtcgtggagggcattgaccagcagcctcacagtcag
tccacgtccttgtga
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