Microcaecilia unicolor: 115470419
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Entry
115470419 CDS
T09142
Symbol
CNOT1
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115470419 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115470419 (CNOT1)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115470419 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115470419 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
115470419
NCBI-ProteinID:
XP_030059453
UniProt:
A0A6P7Y3M4
LinkDB
All DBs
Position
5:complement(170434398..171452181)
Genome browser
AA seq
2424 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNQHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPSPHLFAQLTKALK
LSKVQEVIFGLALLNSSSLDLRGFAAQFVKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGLEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMDSSLADFMQEVGYGFCASVEECRSIIVQFGVREVTAVQVARVLGMMART
HSGLADGIPLQSISAPGSGIWSDGKDKSDNAQAHSWNVEVLIDVVKELNPSLNFKEVTYE
LDHPGFQVRDSKGLQIVAYGIQRGLGMEVFPVDLIYRHWKHTEGQLSFIQHSLMNPEIFC
FADYPCHTVVTDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPTETLATMLACLQACAG
SISQELSETILTMMANCSNVNKARQPPPGVMPKGRPPSTSSLDAISPVQIDPLAAMASLS
IGSSAVPHTQSMPAFPPNLGSAFSTPQSPAKAFPPLSTPNQMTAFSGIGGLSSQLPGGSG
SLTGIGSGGLGLPAVNSDPFGQRKLSASGLNQPTFQQTDFSQVWPEANQHFSKEIDDEAN
SYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFFPQYPDKE
LHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFQSKMYYFGIAALDRFKNRLKDYP
QYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQAQVPAK
APLAGQVSTIVTTSTTTTVAKTITITRPTGVSFKKDVPPSINTTNIDTLLVATDQTERIV
EPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIELNFHSLY
SNFLDALKNLEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITLAKNKP
ILHTDLGVKSLLLEAYMKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMNVLAEL
HQEHDLKLNLKFEIEVLCKNLAIDISELKPSSLLKDKDRLKSLDEQLSAPKKDVKQPEDL
PTITTASEYAIRTAGKLWSSVEKQESDVVFTGIDQILNPGEHNSLIMGSSSNCSHVSIRN
MKPATVTTPATSTTCTVTVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQAHPQLKQC
VRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRMAAHHMMRNLTAGM
AMITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNCELACCFIQKTAV
EKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVY
EEFARNVPGFLPTNDLTQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLHAIPPTLSM
NPQAQALRSLLEAVVLARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVL
KALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDLHLAQSMEN
GLNYMAVAFAMQLVKILLVDERSVGHVTEADLFHTIETLMRINAHSRGNAPEGLPQLMEV
VRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDS
TKAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKC
YHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHR
IFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLNLFPXSIFIARML
AHTPQQKGWPMYAQLLIDLFKYLAPFLRNXELTKPMQILYKGTLRVLLVLLHDFPEFLCD
YHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVM
PPQFKKDLDSYLKTRSPVTFLSELRSNLQVSNEPGNRYNIQLINALVLYVGTQAIAHIHN
KGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLF
AEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKL
FQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7275 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
accaagaaaaactaccgagccagccagcaagaaatacaacacattgtgaatcagcacggc
cctgaggcagacaggcatttattacgctgtctattctcacatgtggatttcagtggcgat
ggtaaaagcagcggtaaagatttccatcagactcaatttctgattcaggagtgtgcatca
ctgattacaaaaccaaattttatctcaacactgtcctatgccattgacaatccattgcac
tatcaaaagagtctaaagccctctccccatttatttgctcagctgactaaagcactcaaa
ttaagcaaggttcaagaggtaatttttggccttgctttactgaattcttctagcttggat
ctacgagggtttgctgctcagtttgtaaaacagaaacttccagatttactgcgttcttac
attgacgcagacgtcagtggaaatcaggaaggtggcttccaagatatcgccatagaggtc
ctgcaccttctcctctcccatctcctttttggacagaagggagcctttggagttggactg
gagcagattgacgctttccttaagacactgcgcagagatttccctcaagaacgttgccca
gtggtgcttgcaccactcctataccctgaaaaacgggatattctaatggacaggatcctg
cctgattctggagggatagccaaaaccatgatggatagctctttggcagacttcatgcaa
gaagtgggctatggattttgtgcaagtgtggaagaatgccgcagtataatagtgcagttt
ggtgttcgggaggtcacggcagtccaagttgctagggttttgggaatgatggctagaact
cactcgggtttggctgatggtatccccttacagtctatttctgcccctggcagtggaatc
tggagtgatggaaaggataaaagtgacaatgcacaagcccattcctggaatgtagaagtc
ttaattgatgttgttaaagagctgaaccctagtttaaacttcaaagaagtaacgtatgaa
ctggaccaccctgggtttcaagtccgtgacagtaaaggcctccagattgtggcttatggt
atccagcgaggcttgggtatggaagtgttcccagttgatctcatttatagacattggaaa
catacagagggccagctctcctttattcaacattccctaatgaatccagagatcttctgt
tttgctgattatccatgtcatactgttgtcacagacattctgaaagcaccaccagaggat
gacaatcgggaaattgctacatggaaaagtttggatctgattgagtccctgttgcggctg
gcagaagtaggacagtatgagcaggtgaaacagctcttcagtttccccatcaagcactgc
ccagatatgctggtattagctttattgcagatcaacacatcctggcacactttacgccat
gaacttatctccacgctgatgccgatcttccttggcaaccatcccaattctgctatcatt
ttgcactacgcatggcatggacagggtcagtctccctcaattcgtcagctgatcatgcat
gctatggcagaatggtatatgagaggagaacaatatgaccaggcaaagctatcgcgcatt
cttgatgttgctcaagacttgaaggccttgtcaatgctgctaaatggtactccgtttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaacttgacaaatgg
ctcacagataaaattcgggagcatggggaaccatttattcaggcatgcatgaccttctta
aaaaggcgttgcccttccattttgggcggcctggctccagaaaaagaccaacccaaaagt
gctcagcttcctacagaaaccctagcaacaatgctggcttgcttacaagcttgtgcaggg
agcatttcccaggaactgtcggagaccatcctgactatgatggcaaactgcagcaatgtg
aataaagccaggcagccacctcctggagtcatgcccaaaggtcgtccccctagcaccagt
agtttggatgccatttctccagtgcagattgaccctctagctgcaatggcatcactcagt
attggtagctcagctgttcctcatactcagagtatgcctgccttccctcccaacttgggc
tctgctttcagtactcctcaatcaccagcaaaagcttttcctcctctctctacaccaaac
cagatgactgctttcagtggcattggaggactctcctctcagcttccaggtggctcaggc
agcttgacaggaataggaagtggaggtcttggactccctgcagtcaacagtgatccattc
ggacagaggaaactgagtgcatctggactcaaccagcctacattccagcagacggacttt
tctcaggtgtggccagaggcaaaccagcacttcagcaaagaaatagatgatgaagcaaac
agctatttccaacgtatatacaatcatcctccccatccaactatgtcagtggatgaggtg
ttagaaatgctgcagagatttaaggattccaacattaaacgtgaacgtgaggtgtttaac
tgtatgctaagaaacttgtttgaggagtaccgctttttccctcagtacccagataaggag
ctgcacattacagcctgtctctttggcggaataatagaaaaaggactggtcacatacatg
gcattgggtcttgccctgcgatatgttcttgaagccttgcgcaaaccttttcaatccaag
atgtactattttggtattgctgcactagataggtttaaaaatagattgaaggactatcca
cagtactgtcagcatttggcttctattagtcactttatacagttcccccatcatttacag
gagtatattgaatatggacagcagtctcgagaccctcctgtgaagatgcagggttcaatc
acaacccctggaagtattgcacttgcccaggcccaggcccaggcccaggttccagccaaa
gctcctcttgcaggtcaagtcagcactattgtcaccacttcaacaaccactactgtggca
aaaaccattactattaccagaccaaccggtgtcagcttcaagaaggatgtaccaccctcc
attaatacaaccaatatagatactctactggtggcgacagaccagacagaaaggattgtg
gaaccaccagaaaatgtgcaagagaagatagctttcatctttaacaatctgtcccaatct
aatatgacacagaaggttgaagagttgaaggaaactgtgaaagaggagttcatgccctgg
gtttcacaatatcttgtcatgaagagagtcagcatagaactcaacttccatagtctgtat
tcaaacttccttgatgccctgaaaaatctggagtttaacaaaatggtactgaccgagact
tacaggaacataaaggtactgctgacatctgataaagctgcagccaacttctctgaccgc
tccctactgaagaacttgggtcactggctggggatgatcacattagctaagaataaaccg
attttgcatacagacctaggtgttaaatccttgctgctggaagcgtatatgaagggtcag
caggagctgctttatgttgtgccctttgtggccaaagtgttagaatctagcatcagaagt
gtggttttccgacctccaaatccctggacaatggccattatgaatgtattagcagagctg
catcaggagcatgatttaaaattaaacctaaagtttgaaattgaggtgctatgcaagaat
ctggcaatagatatcagtgagttgaaaccaagcagtctcctgaaggacaaagacaggctg
aagagcttggatgagcagctttctgctcccaaaaaggatgtcaaacagccagaggactta
ccaacaatcaccacagcaagtgaatatgccatccgcacagcagggaagctgtggtcatct
gtggagaaacaggagtcagatgtagtttttacaggtattgaccaaattttaaaccctggg
gaacataattccttaataatggggtcatcttctaattgcagccatgtttccatcagaaac
atgaaaccagctacagttacgactcctgccaccagtactacgtgcacagttactgttcca
ccacagccccagtacagctaccatgatatcaacgtttattcccttgcagggttggcacca
catatcacactgaatccaacaattcccttattccaggcccatcctcagttgaaacagtgt
gtacgtcaggcaatagagcgtgctgtccaagagcttgtccatccagtggtggatcgctct
atcaagattgccatgacaacctgtgaacagatagtcaggaaggactttgcactggattcg
gaggaatctcggatgcgaatggcagcccatcacatgatgcgcaacctcactgcaggaatg
gccatgatcacctgccgggagcctttgctcatgagcattgccacaaacctgaaaaatagt
tttgccacagcactacgggcggcatccccacagcagcgggagatgatggagcaggcagct
gcacagctagcacaagacaactgtgagttagcatgttgctttatccagaaaactgctgtg
gaaaaagcaggcccggaaatggataagaggctagcaactgaatttgaattgagaaaacat
gcaagacaggagggccgtcgatactgcgatcctgtagtgttaacctatcaggcagaacgg
atgcctgaacagattaggctaaaggttggaggtgtggacccaaaacagctggctgtttat
gaggaatttgcacgcaatgtccctggtttcttacccaccaatgacctcactcagcctaca
gggttcttggcacagcctatgaagcaagcctgggccactgatgatgtagcacagatctat
gataaatgtatcacggaacttgagcagcaccttcatgctattccacctaccttatctatg
aacccgcaagcccaggctctacgcagcctgctggaggcagttgtgctggctcgcaactct
cgggatgccattgcagcacttggcctgcttcaaaaggctgtcgaagggttgctggatgcc
accagtggtgctgatgctgatctcttgctccgttaccgagagtgtcatctcctggtgctg
aaagccctacaggatggccgtgcttatggatctccgtggtgcaacaagcagattaccagg
tgcttgattgaatgccgtgatgaatacaagtacaacgtggaggctgtggagttactaatt
cgcaaccatctagttaatatgcaacagtatgaccttcacctggctcagtcaatggagaat
ggtttgaattacatggctgtggcatttgctatgcagctggtaaagatcctgttggtggat
gagaggagcgtgggccatgtgacagaggcagatctattccataccatcgaaacactaatg
aggatcaatgctcactccagaggaaatgccccagaagggctgcctcaactaatggaggtg
gtcagatcaaactatgaagcaatgattgaccgtgcccacgggggccctaacttcatgatg
cattctggaatatcgcaagcctccgaatatgatgaccctccaggtctgcgggagaaggca
gagtacctcctgagagaatgggtgaatctctaccattctgcagctgctggtcgggacagt
accaaagctttctctgcttttgttggacagatgcaccagcaaggaattctgaaaacagat
gatctgatcacacgttttttccgcctatgcacagagatgtgtgttgagatcagctatcgt
gcccaggcagaacaacaacacaaccctgctgccaaccccacaatgatacgagccaagtgc
taccacaacctggatgcctttgtgagacttattgcacttcttgtgaagcattcaggggaa
gccactaatacagtcacaaaaatcaaccttttgaataaggttcttgggattgttgttggg
gtcctcctgcaggaccatgatgtgcggcaaagtgaattccaacagctaccctatcaccgc
atcttcattatgctactactagaactcaatgcgcctgagcatgtattggagactatcaac
ttccagacccttacagcattctgcaatacattccatatcctacgaccaactaaagctcct
ggctttgtatatgcctggttgaacttatttcccnnatcgatattcattgcaagaatgctg
gcacatacccctcaacagaagggatggcccatgtatgcccagttgttaatcgacctcttt
aagtatttggcccctttcttaaggaatngtgaactcacaaaacctatgcaaattctctac
aagggtactttacgtgtgctgctggttctgcttcatgactttccagaattcctttgtgat
tatcactatggtttctgtgatgtgattccacccaactgcatccaactgagaaacctaatt
ttgagtgcctttccacgtaacatgagactcccagaccctttcactcccaatttaaaggtg
gacatgctaagtgagataaacattgcaccacggatcctcaccaacttcactggagtgatg
ccaccacagtttaagaaggatttggattcctatctgaagacacgttcacctgtcacattc
ctttcagagctgcgcagcaatcttcaggtatcaaatgaacctggtaatcgctacaacatc
cagttgattaatgctctagtactatacgtggggactcaagccattgcacatattcacaat
aaaggcagcactccctcaatgagtactatcactcattctgcacacatggatatctttcag
aacctggctgtggacctggacacagagggtcggtaccttttcttgaatgcaattgccaat
cagctgcggtacccaaacagtcacacacactactttagctgtacaatgctgtaccttttt
gcagaggccaacactgaagccattcaggaacagatcaccagggttcttttagaacggttg
attgttaaccggcctcacccatgggggctcctcattaccttcatcgagctgattaaaaat
ccagcatttaagttctggaaccatgaatttgttcactgtgctcctgaaattgaaaagcta
ttccagtcagttgcacaatgctgcatgggccagaagcaagctcagcaagtgatggaaggc
actggtgcaagttaa
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integrated database retrieval system
