Microcaecilia unicolor: 115480458
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Entry
115480458 CDS
T09142
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115480458 (LSM4)
09123 Folding, sorting and degradation
03018 RNA degradation
115480458 (LSM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115480458 (LSM4)
03041 Spliceosome [BR:
muo03041
]
115480458 (LSM4)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115480458 (LSM4)
mRNA degradation factors
5'-3' decay
Lsm complex
115480458 (LSM4)
Spliceosome [BR:
muo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115480458 (LSM4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
115480458
NCBI-ProteinID:
XP_030075008
UniProt:
A0A6P7ZBH7
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Position
11:90793442..90826125
Genome browser
AA seq
138 aa
AA seq
DB search
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVMSKGRGRGGMQQQKQQKGRGAGGPGRGVFGGRGRSVP
GSGRGQLEKKPGRQSGKH
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgcttccattgtcattactgaaaactgctcagaatcaccctatgttggtggagctgaaa
aatggggaaacctataacgggcacttagtgagctgtgacaactggatgaatatcaaccta
cgagaagtcatatgcacatccagagatggtgataaattctggaggatgcctgagtgttac
attcgtggcagtacaatcaagtacctgcgcatccctgatgaaatcatagatatggtaaag
gaagaagtaatgtcaaagggcaggggtcgaggaggaatgcagcagcagaagcagcagaaa
ggtcgtggagctggaggtcctgggcgaggtgtgtttggaggtcgagggagaagcgtacct
ggtagcgggagaggacagctggagaaaaaacctggaaggcagtctggaaagcactga
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