Mucilaginibacter sp. PAMC 26640: A0256_13200
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Entry
A0256_13200 CDS
T04335
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Pathway
mup03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0256_13200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mup03400
]
A0256_13200
Enzymes [BR:
mup01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A0256_13200
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A0256_13200
DNA repair and recombination proteins [BR:
mup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A0256_13200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AMR32306
LinkDB
All DBs
Position
complement(3057807..3058580)
Genome browser
AA seq
257 aa
AA seq
DB search
MPEIPDLNIFCTNLADRLVGKTLTDISILVPRRLKLPEAAFKDALEKHKLIAINRIGKQI
YFKFANHHVLSLQLMLYGSMLWYEGKNENKFTIAELLFSDGTGLAVTDWQKAVILSLDPE
ISKVPDAMDMHYAYLNQALKGIMKPIKTVLQEGKVVQGLGNAYTDEILYAAKLSPFSIAG
KIPEPKIRMLTKSINDVLTEAEAHIRQNFPDTITEKERDFLKVHLPKHKITPNGEAILVA
KIASRKTYYTQGQELFE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaatacccgatctgaatatattttgcactaaccttgctgaccgtttggtcggt
aaaacattaaccgacatcagcattcttgtccctcggaggctaaaattaccagaagctgca
tttaaagacgcgcttgaaaagcataaactaattgctatcaaccggataggcaagcaaata
tattttaaatttgcgaatcaccatgttctaagcctgcagttgatgctatatggatctatg
ctatggtacgaaggcaaaaacgaaaataagtttacaattgctgagttgctgttttcagat
ggtaccgggctggctgttactgattggcaaaaagcggttatcctatcacttgatccggaa
atttccaaagtccctgatgctatggatatgcattacgcctacctgaatcaggcgcttaag
gggataatgaaacctattaaaactgttttacaggagggaaaggtggtgcaggggttaggt
aatgcctatacagacgagatcctttacgccgcaaaactctcgcctttttctatagccgga
aaaattcctgagccgaaaatcaggatgctgacgaaatccattaatgatgttttgacagaa
gccgaagcccatatccgccaaaacttccctgataccattactgaaaaggaacgggatttt
ctaaaagtccacctgcccaaacacaaaattacaccaaatggtgaggctattcttgtggcc
aaaatagcctcacgaaaaacttattacactcaaggacaggaattatttgagtaa
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