Muriicola soli: EQY75_02750
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Entry
EQY75_02750 CDS
T05825
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mur
Muriicola soli
Pathway
mur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EQY75_02750 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mur03021
]
EQY75_02750 (rpoC)
03400 DNA repair and recombination proteins [BR:
mur03400
]
EQY75_02750 (rpoC)
Enzymes [BR:
mur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EQY75_02750 (rpoC)
Transcription machinery [BR:
mur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EQY75_02750 (rpoC)
DNA repair and recombination proteins [BR:
mur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EQY75_02750 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QBA63560
UniProt:
A0A411E7W4
LinkDB
All DBs
Position
605133..609431
Genome browser
AA seq
1432 aa
AA seq
DB search
MARHHDNTAVKRFNKISIGLASPESILAESRGEVLKPETINYRTHKPERDGLFCERIFGP
VKDYECACGKYKRIRYRGIVCDRCGVEVTEKKVRRDRVGHINLVVPVAHIWYFRSLPNKI
GYLLGLPSKKLDMIIYYERYVVIQAGVAKGPEGEELKMLDFLTEEEYLNIMESIPPENQY
LEDSDPNKFIAKMGAECLIDLLSRIDLKELSYNLRHKANTETSKQRKTEALKRLQVVEAL
RESQDNRENRPEWMIMKVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLM
EIKAPEVILRNEKRMLQEAVDSLFDNTRKASAVKTESNRPLKSLSDSLKGKQGRFRQNLL
GKRVDYSARSVIVVGPEMSLYECGLPKDMAAELYKPFVIRKLIERGIVKTVKSAKKIIDK
KEPVVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIRLHPLVCTAFNADFDG
DQMAVHLPLGPEAILESQLLMLASHNILNPANGSPITVPSQDMVLGLYYMTKERKSTKER
PVKGEGLTFYSYEEVVIAFNENRVELNAGIKVRAKDFNEEGELVNQIIETTVGRVLFNMV
VPEQAGYVNDVLNKKSLRDIIGKILSVTDVPTTADFLDKIKTMGYEFAFKGGLSFSLGDI
IIPQEKHEMIADANEQVDGIMTNYNMGLITNNERYNQVIDVWTSTNAMLTELAMKRIRED
QQGFNSVYMMLDSGARGSKEQIRQLTGMRGLMAKPKKSTAGGGEIIENPILSNFKEGLSI
LEYFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNIEDCGTLRGIEVEALKKNE
EVVETLGERILGRVALHDVFDPITEELLLTAGQQIMESDVRKVEASPIERVEVRSALTCE
AQKGICAKCYGRNLATNKMVQRGEAVGVVAAQSIGEPGTQLTLRTFHVGGIAGNISEDNK
LEAKFDGKAEIEDLRTVKGENSEGKPVNIVISRTSEIKIVDAKTGITLSTNNIPYGSQLF
IKDGAKVKKGELICQWDPYNGVIVSEFPGKIAYENIEQGITYQVEIDEQTGFQEKVISES
RNKKLIPTLLIKNTKDEVLRSYNLPVGSHIMVDDGEKIKEGKILVKIPRKSAKAGDITGG
LPRVTELFEARNPSNPAVVSEIDGVVSFGKIKRGNREIIIESKLGEQKKYLVKLSNQILV
QENDYVRAGMPLSDGSITPEDILAIKGPSAVQQYLVNEVQEVYRLQGVKINDKHFEVVVR
QMMRKVRIEDPGDTIFLENQLVHKDDFIRENDEIYGMKVVEDAGESENLKPGQIISAREL
RDENSILKRADKNLVTAKEAVAATATPVLQGITRASLQTKSFISAASFQETTKVLNEAAV
SGKVDDLEGLKENVIVGHKIPAGTGMRDYESIIVGSKQEYDEIMARKEELKF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggctagacatcacgataacacagcagtaaagaggtttaacaagatttccataggcctg
gcatctccggaatctattctggcagagtcgagaggggaagttctcaaacccgaaaccatt
aactacagaacgcacaagcccgaaagggacggattgttctgtgagcgaatttttgggccc
gtaaaagactacgaatgtgcttgtggaaagtataaaagaatccgataccgtggcattgtt
tgcgaccgttgcggggttgaggttacagagaaaaaagtacgtagagaccgcgtaggacac
atcaatctggtggttcctgttgcccatatctggtacttccgttccctacccaacaaaata
ggctacttgctgggcttgccctccaagaagctcgatatgatcatatattacgagcgctat
gtagttatacaggcgggagtggcaaaaggaccggaaggcgaagaattaaagatgctcgat
ttccttacagaagaggaatatctgaacatcatggagtcgattccaccggaaaatcaatat
ctggaggattcggatcccaataaatttatcgctaagatgggtgcggaatgtttaattgat
cttttatcgaggatcgaccttaaagaactttcctataacctgcgtcacaaagctaacacg
gaaacttccaagcagcgtaagaccgaagccctgaaaagacttcaggtagtagaggcgttg
cgtgaatcacaggataaccgtgagaacaggccagagtggatgatcatgaaagttgttcct
gtgatcccaccggaattaagaccattggttccccttgatggaggtagatttgctacctcg
gatctcaacgatctttacagaagggtgatcatcagaaataaccgcttaaagcgattgatg
gaaatcaaagcccctgaagtgatcctcagaaatgagaagaggatgctgcaggaagctgtt
gattccctatttgataatacaagaaaggcatctgccgttaaaacggaatcgaacagaccg
ttaaaatctctttctgattccctcaaagggaaacaaggtagatttcgtcagaatttactc
ggtaaacgtgtcgactattcagcgcgttcagtgatcgttgtaggtcctgagatgagtttg
tacgagtgcggactgccgaaagacatggccgcagaactttacaaacccttcgtgatccgt
aaactgatcgaaagaggaattgtaaaaactgttaaatcggccaaaaagattattgataag
aaagagccggtagtttgggacatccttgagaatgttcttaaaggacaccctgtacttctc
aacagggcccccacactgcacagattgggtattcaggcgtttcagccaaaactgatcgaa
ggaaaagctattcgtttgcatcccttagtatgtaccgcatttaacgcggattttgacggg
gatcagatggcagttcaccttccattgggacctgaagcgatactggagtcacaattgtta
atgctggcttctcataacatcctgaatcctgcaaacggttcacctataacggttccatct
caggatatggttctagggttgtactacatgaccaaggaacgcaagtctaccaaggaaagg
cctgttaaaggcgaaggcctgacattttactcttatgaagaggtggtcattgcctttaat
gaaaacagggtagagcttaatgccggaatcaaagtaagggctaaggattttaatgaagaa
ggggagttggttaaccagattatcgaaactactgtaggaagggttctcttcaatatggta
gttccggaacaggcgggttatgtcaacgatgtattgaataagaaatcgctaagggatatc
atcggtaagattttgtctgtaaccgatgtgccaactacagccgatttcctggataaaatc
aagaccatgggatatgagttcgccttcaaaggtggcttgtccttcagccttggggatatt
attatcccacaggagaaacacgaaatgatcgcagatgccaacgagcaggtggatggcatt
atgacgaattataacatgggtcttatcaccaacaacgaaagatacaatcaggtgatcgac
gtgtggacctctacaaacgctatgcttactgagctggccatgaagaggattcgcgaagac
cagcagggattcaattctgtgtatatgatgctcgattcgggggcaaggggatctaaagaa
cagatcagacagcttaccggaatgaggggattgatggccaaacccaaaaaatctaccgcc
ggtggaggggagatcatcgaaaacccgattctttctaactttaaagaaggactctcgatc
ctcgaatactttatctcaactcacggtgcacgtaaaggattggccgataccgctcttaaa
acagcggatgcaggttacctaacccgtagactggttgatgtttctcaggatgtaatcgta
aatattgaagattgcggtacgttaagaggaattgaagttgaagccctcaagaagaatgag
gaagtagtagagactcttggagaaaggatattaggacgtgttgctttgcacgatgtcttt
gatccaatcactgaagaacttttgcttacggcaggacaacaaattatggagtctgatgta
agaaaagttgaagcctcaccaatcgaaagggttgaagttcgctcagccttgacatgtgaa
gctcagaaaggaatctgtgccaagtgttacggaagaaatctcgcaaccaataaaatggtt
caaagaggtgaagccgttggtgttgtagctgctcagtctattggagaaccgggaactcag
cttacgctgcgtaccttccacgttggaggtattgcgggtaacatctcggaagataataag
ctggaagctaaatttgacgggaaagcagaaattgaagatctgcgaaccgtaaaaggtgaa
aatagcgaaggtaaacccgtgaatattgttatttcaaggacgtctgagatcaagatcgta
gacgcaaaaaccggaataacactaagtacaaataatattccttacggttcacagctcttt
atcaaagatggagctaaggtgaaaaagggtgagcttatttgtcagtgggatccctataac
ggagttattgtttctgaattcccgggtaagatcgcctacgagaatatcgagcaaggtatc
acttaccaggttgagatcgatgaacaaaccggattccaggaaaaagtgatttcagaatca
aggaataaaaaacttattcccactttattgatcaagaataccaaagatgaggtattgcgt
tcttacaatttaccagtaggatcacatatcatggtagatgacggagaaaagatcaaggaa
ggtaagattctggtaaaaataccacgtaaatctgccaaggcaggggatatcaccggaggt
ctgccaagggtaaccgaattatttgaagcgcgtaacccttctaatcctgcagtagtttct
gaaattgacggtgtagtctcctttggtaaaatcaaaagaggaaaccgggagattattatc
gaatccaagttgggtgaacagaaaaaatatctcgtcaaactttcaaatcagatcctcgtt
caggaaaatgattacgtaagagcaggaatgcctttatccgatggatccattacgcctgaa
gatattctggctatcaaaggaccatctgcggtacagcagtatttggttaacgaagtacag
gaggtttaccgactacagggtgtaaaaattaacgacaaacacttcgaggtagttgtaaga
cagatgatgcgtaaggttcgaattgaagatccgggagacactatcttccttgaaaatcaa
ttggttcacaaggatgattttatccgggagaacgatgagatctacggaatgaaagtcgtt
gaagatgcaggagagtctgaaaatctgaaacctggacaaatcatttcagcacgtgaatta
agggacgagaattcgatcctcaaacgcgccgataagaacctggttacagcaaaagaggct
gttgcagccactgcaacacctgtactccaaggaattacaagggcttcactacaaaccaaa
tcgtttatttcagctgcttccttccaggaaacgaccaaggtattgaacgaagctgcagta
agtgggaaggtagatgaccttgaaggcttaaaggaaaatgttattgtagggcataaaatc
cctgcaggaacaggaatgcgagattatgaatctatcatcgtgggctccaaacaggagtac
gatgagatcatggctcgtaaggaagaattgaaattctaa
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