Musa acuminata (dessert banana): 103984378
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Entry
103984378 CDS
T03447
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103984378
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
103984378
Transcription factors [BR:
mus03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103984378
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
103984378
NCBI-ProteinID:
XP_009400134
UniProt:
A0A804J1M5
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Position
BXJ2-5:complement(4900184..4901529)
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AA seq
311 aa
AA seq
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MGEDLTEVFGHAKLTQAELVGATSPEDLFSILETFEDAINVELRPVGSQGLAGPFEADED
DEEAGQARKKQKVSNAAVAQDGQQKMSHVTVERNRRKQMNDHLSVLRSLMPCFYVKRGDQ
ASIIGGVVEYIKELQQVLQSLEAKKQRKAYGELLSPRPASSPRSSSTLSPRPPPLSPRMA
LPISPRTPQPRSPYGPGMQRSYLSPTLVSSHESSSPIDSSSSELVANSKSPVADVEVKFS
GPNVILRTVSHRIPGQALKIVAALEALALEILHVRITTADDTMLNSFTIKIGIECELSAE
ELAQKIQQTFY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagacctgactgaagtcttcgggcacgcgaagttgacgcaagcggagttggtc
ggagccacctcgccggaggatcttttcagcatcttggaaacatttgaggatgccataaat
gtggagctacgtccagtaggttctcaagggttagctggccctttcgaggccgatgaggat
gatgaagaggccggccaagctcggaagaagcagaaagtgtcgaacgctgcggttgcccaa
gatggacagcagaagatgtctcacgtcacggtggagcgcaaccggcggaagcagatgaac
gatcacttgtcggtgctgcgctcgttgatgccttgcttctatgtcaaaagaggagatcaa
gcaagcatcataggaggggtagtggagtacatcaaggagctgcagcaagtgttgcagtcc
ctggaggccaagaagcaaaggaaagcttacggtgaactgctaagtccaaggccagcttcc
agcccgaggtcttcttcaaccttgagccccagaccaccacctctaagccctagaatggct
cttcccatcagtccaagaactccacaaccgagaagcccttacggaccggggatgcaacgc
agctacctctccccgacactggtctcctcccatgaatcctcctctcctattgacagcagc
agctctgagctggtagccaactccaaatccccggtggccgatgtggaggtgaagttctca
ggcccaaacgtgatccttagaactgtgtcgcatcgcatccctgggcaagctctgaagata
gttgcagctctcgaggccctcgcgctcgagatactccatgtcagaatcaccaccgccgat
gacaccatgctcaactcattcaccatcaagatcggaatagagtgcgagctcagcgccgag
gaactcgcacaaaaaattcagcaaacattctactaa
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