Musa acuminata (dessert banana): 135585937
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Entry
135585937 CDS
T03447
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X2
KO
K23720
UV-stimulated scaffold protein A
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135585937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
135585937
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135585937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
TPR_TNPO3_IPO13_4th
Motif
Other DBs
NCBI-GeneID:
135585937
NCBI-ProteinID:
XP_009413388
UniProt:
A0A804K8F0
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Position
BXJ2-8:42626995..42631561
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AA seq
653 aa
AA seq
DB search
MGREEESDTVAAMVPRLIEKATNSTAPEINPRLLKAIKYTVRYSDDEVHAAVQSLMVQMK
KPHSQVRYLAVLIIDELFMRSKLFRSLLVINFDQFLSLSVGFRRNMPLPPPSSIASNLRK
MSIELLEKWHSSYGIYYRQLRLGFDYLKNTLRFQFPNRLEIAARLQQERREREMRTQHIL
LNKFENLKDNFSSIKSEIQLTIDEIGECLAIINEKEEEFNLHNFSEDDEVGEFQSLTLRQ
IRLDSLKEGQKVQEDNDNKAIFDALRELFKLLISKHLTSVQEWISVLIRVDLNDHKFRDT
ALKEFIDIRNVIQSVRNRCVQVGCVLNDPPSQEEDIWEEGKIEDYIPQNSVMNRSLVENS
VDIPSTHKCKKSAPTEENNLSDSSQSVSERSRLLVEAPVLSWGPFLDNWGSKRDVLANQR
GLELDGHWGRVDYDAVIPAERIAELSVHRTVYKEEAVEIQPCLAPLRKGGLCQRKDLRVC
PFHGPIIPRDALGNPIGRSPCSTGEIEKDSSTEATEHNGENGAEESPNLSKVTVEQLAKQ
AVKNVRERDREVKMLKRAKLAKVREHNEVVLREAAIASTSYSEATGERRDASHESLSEGK
TKKPTLASMLKKKVTAKDRISQRLLSTRVSDSATRQLMQGEDLNYREAFPNQW
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggggagggaggaagaaagcgatacggtggcagcgatggtgccgaggctgattgagaag
gccaccaattccacagcaccggagattaatcctcgcctcctcaaggccatcaagtacacg
gtccggtactccgacgacgaggtccacgccgccgttcaatccctaatggtccagatgaag
aagccccactcccaggtgcgctacctggccgttcttatcattgatgaactcttcatgcgt
tcgaagctattcagatctctgctagtaatcaactttgaccagttcttgagcttaagtgtt
ggtttcaggagaaatatgcctcttccacctccatcttccattgcgtccaatttgcgtaag
atgagcatagagctgctagagaaatggcattcctcttatgggatttactataggcagcta
agattgggtttcgattacctgaaaaacactctcagattccaattccccaatcggttagaa
attgcagctcgcttgcagcaagagagaagagaaagggaaatgaggacacagcatatttta
cttaataagtttgaaaatctaaaggataatttctcctctatcaagagtgaaattcagttg
acaattgatgaaattggcgagtgtttagcaattattaatgaaaaagaagaggaatttaat
ctgcataactttagtgaagatgatgaggtgggagaatttcagtcacttacattgcggcaa
attcgtctagattccttaaaggaaggccagaaggtccaggaggacaacgacaataaagct
atctttgatgcactgagggagttgttcaagcttctaatctcaaagcatttgacatcagtg
caagagtggatatctgtactcatcagagtcgatctcaacgaccacaaattcagggacacc
gcattaaaggagttcattgacatccgtaatgttatccagtctgttaggaatagatgtgtt
caagtaggttgtgtgctgaatgacccaccaagtcaggaggaggacatctgggaagagggt
aaaatagaagattacataccacagaattctgtcatgaatagaagcttagttgagaattct
gtagatattccaagtacacacaaatgcaagaagtcagctccaacagaagaaaataatcta
tctgatagttcacaatcggtgtccgaaaggtcaagacttttggttgaagcacctgtattg
tcttggggtccattcttggataactggggttcaaaaagagatgttttagccaaccagagg
ggactggagctggacggccactggggtagagtggactatgatgctgttattcctgcagag
aggattgcagagctgagtgttcatcgcacagtatataaagaggaggcagttgaaatccag
ccgtgccttgctcctttaaggaaaggtgggctctgtcagaggaaggatttgagggtgtgc
cccttccacggccctattataccacgtgatgctctgggaaatcctataggaagaagtcca
tgtagtactggagaaatcgaaaaagattcttctactgaggcaactgaacacaatggtgaa
aatggtgcagaagaatctcccaatttgagcaaggtaacagttgagcaattggcgaaacag
gcagtgaagaatgtgagggaaagagacagagaagttaagatgttgaagagggcaaaactt
gcaaaagtccgtgaacataacgaagttgttttacgagaagctgcaattgcttcaacctca
tactccgaagctactggtgagcggagggatgcctcacatgaaagtctaagtgagggcaag
accaagaagcctacactggcatcaatgttgaagaagaaggtaacagccaaagatagaata
tcccaaaggctgttaagtacacgtgtaagtgattctgcaaccaggcaactcatgcagggg
gaggatctaaattacagagaggctttcccaaatcaatggtaa
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