Musa acuminata (dessert banana): 135611007
Help
Entry
135611007 CDS
T03447
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00040
Pentose and glucuronate interconversions
mus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
135611007
Enzymes [BR:
mus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
135611007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF5026
Motif
Other DBs
NCBI-GeneID:
135611007
NCBI-ProteinID:
XP_064962283
LinkDB
All DBs
Position
BXJ2-4:42503895..42508854
Genome browser
AA seq
488 aa
AA seq
DB search
MLLHHRHRLPAHILLFLLSFPLLTAASPFPNSSLHLDAHRDPDSVAREVQRKVEFSHRRA
LLAAGAKDQCVTGNPVDDCWRCSGSDWRQDRQRLADCGIGFGRDALGGKGGPIYVVTDPS
DRDPVNPAAGTLRYGAIQEGPLWITFARDMTIRLNEELLVNSFKTIDGRGAVVHIAGGAC
ITLQYVSNIIIHNVHVHHCVPAGEANVRSSPTHYGWRTRSDGDGISIYSGRKIWVDHCAL
SYCADGLIDAVMGSTGITISNNHFSHHNEVMLLGHSDDYLPDSGMQVTIAFNRFGEELVQ
RMPRCRRGYFHVVNNDFTAWQMYAIGGSANPTINSQGNRYIAPTNPGAKEVTKRVDTEES
DWSGWNWRTEGDVMVNGAFFVASGQGLEAKYAKAWSVEPKSAALIDQLTGNAGVLGGPRD
NSVGPGNSGVNYVGSATTQDGGEGGYGSLGMVFASVAPPPSAPPIFSSVSIFLSFYLIVA
ALFSLCRP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctcctccaccaccgccatcgccttcccgcccacattctccttttcttgctctcattc
ccactcttgacggccgcatcgccctttcccaactcctccctgcatctcgacgctcaccgc
gaccccgattccgtcgcccgcgaggtccagaggaaggtggagttctcccaccggcgtgcc
ctcctggccgcgggcgccaaggaccagtgcgtcaccggcaaccccgttgatgactgctgg
cggtgctccggctcggactggcggcaggaccggcagcgactcgcggactgcggcatcggc
ttcggccgcgatgccctgggggggaagggcgggccgatctacgtggtgacggacccgtcg
gatcgcgacccggtgaatcccgccgcgggcaccctccggtacggcgccatccaggagggg
cccctgtggatcaccttcgcccgcgacatgaccatccgcctcaacgaggagctgctggtg
aacagcttcaagaccatcgacggccgtggcgccgtggtccacatcgccggcggcgcctgc
atcacccttcagtacgtctccaatatcatcatccacaacgtgcacgtccaccactgcgtc
cccgcgggcgaggccaacgtgcgctcctcccccacccactacggctggcgcacccggtcc
gacggcgacggcatttccatctacagcgggcgcaagatctgggtggaccactgcgcgctg
tcctactgcgccgacgggctcatcgacgccgtcatgggctccaccgggattaccatctcc
aacaatcacttctcgcaccacaatgaggtgatgctgctgggtcacagcgatgactacctg
ccggactcggggatgcaggtgaccatcgcgttcaaccggttcggggaggagctggtgcag
cggatgcctcgttgccggcgcggttacttccacgttgtgaacaacgacttcacggcgtgg
cagatgtacgccatcggcggcagtgccaaccccaccatcaacagccagggcaaccgctac
atcgcccccaccaaccccggcgccaaagaggtgacgaagagggtggacacggaggaaagc
gactggagcgggtggaactggcggacggagggggacgtgatggtgaacggagcgttcttc
gtggcgtccgggcaggggcttgaggccaagtacgccaaggcctggagcgtcgaacccaag
tccgcggccctcatcgaccagctcaccggcaacgcgggcgtcctcggtgggcccagggac
aacagcgtggggccggggaactccggagtcaactatgttgggtccgccaccactcaagac
ggtggcgaaggcggatatgggtcccttggtatggtgtttgcaagcgtcgcgccaccgcca
tctgctcctccaatcttctcctccgtcagtatcttcttgtctttctatttaattgtcgca
gctctcttctctctttgtagaccctga
DBGET
integrated database retrieval system
