Musa acuminata (dessert banana): 135612501
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Entry
135612501 CDS
T03447
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus00040
Pentose and glucuronate interconversions
mus01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
135612501
Enzymes [BR:
mus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
135612501
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
135612501
NCBI-ProteinID:
XP_064964949
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Position
BXJ2-5:11318952..11322649
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AA seq
447 aa
AA seq
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MSMVIPRLPFLCLLVISFVGGGDICPSRVVAAAAMAQGSLRATASNGSSSTMAQGPAGDV
VVGAVDDPEFIATEVEIRQIGNITARRSLGYLSTCVTGNPIDDCWRCDPEWHLHRKRLAD
CGIGFGRSAMGGRNGRFYRVTDPSDDDPVNPRPGTLRYAVIQDEPLWIVFKRDMVITLKQ
ELIMNSFKTIDGRGANVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGW
RTIADGDAISIFGSSHIWVDHNSLSNCADGLVDAIMGSTAITISNNYFTHHNEVMLLGHS
DSYVRDKAMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQ
SNRYLAPTNPFAKEVTKRVETSSDVWESWNWRSEGDLLLNGAYFTPSGAGASASYSRASS
LGAKSSSMVGSITAGAGALPCRKGSLC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggtgattcccaggttgccgtttctttgccttctggtgatttcattcgtggga
ggcggggacatttgcccctccagggttgtagctgccgcggcaatggcgcaggggagcttg
agagcaaccgccagcaatgggtcgtcttccaccatggcacaagggcccgcaggtgacgtg
gtagttggcgcggtggacgatccagaatttatagcaacagaggtggaaatcaggcagata
ggcaacatcacggcgcgccggtcgctgggctacctatcaacatgcgtgacgggcaacccc
atcgacgactgctggcgctgcgaccccgagtggcacctccaccgcaagcgcctcgccgac
tgcggcatcggcttcgggcgcagcgccatgggcggccgcaacgggcggttctaccgcgtg
accgaccccagcgacgacgacccagtgaacccccgccccggcaccctccgctacgccgtg
atccaggacgagcccctctggatcgtgttcaagcgcgacatggtcatcaccctcaagcag
gagctcatcatgaacagcttcaagaccatcgacggccgcggcgccaacgtccacatcgcc
aacggcgcctgcatcaccatccagttcgtcaccaacatcatcatccacggcctccacatc
cacgactgcaagcccaccggcaatgccatggtccgcagctccccctcccactacggctgg
aggaccatcgccgacggcgacgccatttccatcttcggctccagccacatctgggtcgac
cacaactccctgtccaactgcgccgacggcctcgtcgatgccattatgggatccaccgcc
atcaccatctccaacaattacttcacccaccacaatgaggtgatgcttttggggcatagc
gattcgtacgtgcgagacaaggctatgcaggtgaccattgccttcaaccacttcggtgaa
ggactcattcaaagaatgccaaggtgcagacatggctacttccatgtggtgaacaatgat
tacactcactgggagatgtacgccattggaggaagtgcgaatccgaccataaacagccaa
agcaacagataccttgcacctaccaatcccttcgccaaggaggtgacgaagagggtggag
acttcgagtgatgtttgggagagctggaattggagatcagagggcgacctgctactgaac
ggtgcctacttcaccccatcgggagctggtgcctctgcaagctactcgagggcctccagc
cttggggccaagtcatcctccatggttggctccatcactgcaggggcaggggccctcccg
tgccgcaagggttccctgtgctaa
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