Mumia sp. ZJ1417: H4N58_16650
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Entry
H4N58_16650 CDS
T06740
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
muz
Mumia sp. ZJ1417
Pathway
muz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
muz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H4N58_16650 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muz03021
]
H4N58_16650 (rpoB)
03400 DNA repair and recombination proteins [BR:
muz03400
]
H4N58_16650 (rpoB)
Enzymes [BR:
muz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H4N58_16650 (rpoB)
Transcription machinery [BR:
muz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H4N58_16650 (rpoB)
DNA repair and recombination proteins [BR:
muz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H4N58_16650 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QMW65781
UniProt:
A0A7G5LUQ9
LinkDB
All DBs
Position
complement(3423083..3426553)
Genome browser
AA seq
1156 aa
AA seq
DB search
MASSRTAAASATINPRRVSFAKISEPLEVPELLSLQTDSFSWLIGDEIWKASVEQQLAAG
RTDVSTKSGLEEIFEEISPIEDFSETMSLSFRDHRFEPPKNSVEDCKDRDVTYAAPLFVT
AEFMNNETGEIKSQTVFMGDFPLMTDKGTFIINGTERVVVSQLVRSPGVYFERTPDKTSD
KDIYTAKVIPSRGAWLEFEIDKRDQVGVRLDRKRKQSVTVLLKALGWTEAQILEEFGQYD
SIRATLEKDHTSGQDEALLDIYRKLRPGEPPTTEAAQQLLDNYYFNPKRYDLAKVGRYKI
NKKLGTDEAFDQQTLTIEDIVSTIKYIVALHAGETELEMPAGTAFVEADDIDHFGNRRLR
SVGELIQNQLRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVAALKEFFGTSQLSQF
MDQNNPLAGLTHKRRLSALGPGGLSRERAGYEVRDVHPSHYGRMCPIETPEGPNIGLIGS
LASYGRINPFGFVETPYRRVDGIRVTEQIDYLTASDEDRYVIAQANSRLEEDGTFAEDRV
LVRQRGGEAELVPAAEVDYMDVSPRQMVSVATALIPFLEHDDANRALMGSNMQRQSVPLI
RNDAPLVGTGMEFRAAVDAGDVTVAKAPGVVTEVCADYVEVMQDDGTYKTYRMSKFTRSN
QGTCINQRPLVREGDRLVKGSPIADGPCTDEGEMALGSNLLVAFMPWQGHNYEDAIILSQ
RVVQDDLLTSIHIEEHEVDARDTKLGPEEITRDIPNVSDEMLADLDERGIIRIGAEVSNG
DILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIGVRVFDREEGD
ELPPGVNQLVRVYVAQKRKISDGDKLAGRHGNKGVISKILPVEDMPFMSDGTAVDIILNP
LGVPGRMNVGQVLETHLGWVAKAGWDIGDAKDEWAERLRGIGADRSPMDSNVATPVFDGA
REDEIQGLLEWTLPNRDGERMVGRDGKARLFDGRTGEPFPDPVSVGYMYILKLHHLVDDK
IHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDILGRV
KVYEAIVKGENVPEPGIPESFKVLVKEMQSLCLNVEVLSSDGTAVEMRDAEEDVFRAAEE
LGIDLSRREPASVEEV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
ttggcttcctcgcgcactgccgccgcctctgccaccatcaacccccgtcgtgtctccttc
gccaagatctctgagcccctcgaggtgcccgagcttctgtcgctccagacagacagcttc
tcgtggctgatcggggacgagatctggaaggcgtccgtcgagcagcagctggccgccggg
cgtacggacgtttcgacgaagtccggtctggaggagatcttcgaagagatctctccgatc
gaggacttctccgagaccatgtcgctgtcgttccgcgaccaccgtttcgagccgcccaag
aactcggtcgaagactgcaaggaccgcgacgtcacctacgccgcgcccctgttcgtcacc
gccgagttcatgaacaacgagaccggtgagatcaagagccagaccgtcttcatgggggac
ttccccctgatgacggacaagggcaccttcatcatcaacgggaccgagcgtgtcgtcgtc
tcgcaactcgtccgttcgccgggcgtctacttcgagcgcacgccggacaagacgagcgac
aaggacatctacaccgcgaaggtcatcccttcgcgcggcgcctggctcgagttcgagatc
gacaagcgtgaccaggtcggcgtccggctcgaccgcaagcgcaagcagagcgtcacggtg
ctcctcaaggcgctcggctggaccgaggcgcagatcctcgaggagttcggccagtacgac
tcgatccgcgcgaccctggagaaggaccacacgtccggccaggacgaggcgctgctcgat
atctaccgcaagctgcgtccgggtgagccgccgacgaccgaggccgcccagcagctcctc
gacaactactacttcaaccccaagcgttacgacctcgccaaggtcggccgctacaagatc
aacaagaagctcggcacggacgaggccttcgaccagcagacgctgaccatcgaggacatc
gtctcgacgatcaagtacatcgtcgcgctgcacgctggcgagaccgagctcgagatgccg
gccgggacggccttcgtcgaggccgacgacatcgaccacttcggcaaccgtcgcctgcgc
agcgtcggcgagctcatccagaaccagctccgtacgggtctggcccgcatggagcgggtc
gtccgcgagcggatgacgacccaggacgtcgaggcgatcacgccgcagaccctgatcaac
atccgccccgtcgtggcggcgctgaaggagttcttcggcacctcgcagctgtcgcagttc
atggaccagaacaacccgcttgcgggcctgacgcacaagcgtcgtctctcggccctcggc
ccgggtggtctctcgcgtgagcgcgccggctacgaggtccgtgacgtccacccgtcgcac
tacggccgcatgtgcccgatcgagacccccgagggtcccaacatcggtctgatcggctcg
ctggcgtcgtacggtcgcatcaacccgttcggcttcgtcgagactccctaccgcagggtc
gacggcatccgggtcaccgagcagatcgactacctgaccgcgagtgacgaggaccgttac
gtcatcgcgcaggccaactcgcgcctcgaggaggacggcaccttcgcggaggaccgcgtc
ctggtccgccagcgcggcggcgaggccgagctggtcccggccgccgaggtcgactacatg
gacgtctcgccgcgccagatggtgtcggtcgcgaccgcgctgatcccgttcctggagcac
gacgacgccaaccgcgcgctcatgggctccaacatgcagcgtcagtccgtcccgctgatc
cgcaacgacgcgccgctggtcggcaccggcatggagttccgtgccgccgtcgacgccggt
gacgtcaccgtggccaaggccccgggcgtcgtgaccgaggtctgcgccgactacgtcgag
gtcatgcaggacgacggcacctacaagacctaccgcatgtcgaagttcacgcgctccaac
cagggcacgtgcatcaaccagcgtccgctggtgcgtgagggcgaccgtctcgtgaagggg
tcgccgatcgccgacggtccctgcaccgacgagggcgagatggctctcgggtccaacctc
ctggtcgcgttcatgccgtggcagggccacaactacgaggacgcgatcatcctctcccag
cgtgtcgtccaggacgacctgctgacctcgatccacatcgaggagcacgaggtcgacgcc
cgcgacaccaagctgggcccggaagagatcacccgcgacatcccgaacgtcagcgacgag
atgctcgctgacctcgacgagcgcggcatcatccgcatcggcgccgaggtctccaacggc
gacatcctcgtcggcaaggtcacgccgaagggcgagaccgagctgacccccgaggagcgt
ctgctccgcgcgatcttcggcgagaaggcgcgcgaggtccgcgacacctcgctcaaggtt
ccccacggcgagtccggcacggtcatcggtgtccgggtcttcgaccgcgaggagggcgac
gagctgccgccgggcgtcaaccagctggtgcgcgtgtacgtcgcgcagaagcgcaagatc
tccgatggtgacaagcttgccggccgtcacggcaacaagggcgtcatctccaagatcctg
ccggtcgaggacatgccgttcatgtccgacggcaccgcggtcgacatcatcctgaacccg
ctcggcgtgccgggccgtatgaacgtcggtcaggtcctcgagacccacctcgggtgggtc
gcgaaggccggctgggacatcggcgacgccaaggacgagtgggccgagcgcctgcgcggg
atcggcgccgaccgttccccgatggactccaacgtcgccaccccggtcttcgacggtgcg
cgcgaggacgagatccagggcctcctggagtggacgctccccaaccgtgacggcgagcgc
atggtcggtcgcgacggcaaggcgcgtctgttcgacggacgtacgggcgagccgttcccg
gacccggtctcggtcggctacatgtacatcctgaagctgcaccacctggtcgacgacaag
atccacgcccgttcgaccggtccgtactcgatgatcacgcagcagccgctgggtggtaag
gcgcagttcggtggacagcgattcggtgagatggaggtgtgggccctcgaggcgtacggt
gccgcgtacgcactgcaggagctcctcaccatcaagtccgacgacatcctcggacgcgtc
aaggtctacgaggccatcgtcaagggcgagaacgtccccgagccgggtatcccggagtcg
ttcaaggttctcgtcaaggagatgcagtcgctctgcctgaacgtcgaggtgctgtcgagc
gacggcaccgcggtggagatgcgcgacgccgaggaagacgtgttcagggccgctgaagag
ctcgggatcgatctctcccgtcgcgagcccgccagcgtcgaggaggtctga
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