Mycolicibacterium vanbaalenii: Mvan_1257
Help
Entry
Mvan_1257 CDS
T00449
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mva
Mycolicibacterium vanbaalenii
Pathway
mva03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mva00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mvan_1257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mva03021
]
Mvan_1257
03400 DNA repair and recombination proteins [BR:
mva03400
]
Mvan_1257
Enzymes [BR:
mva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mvan_1257
Transcription machinery [BR:
mva03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Mvan_1257
DNA repair and recombination proteins [BR:
mva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Mvan_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ABM12092
UniProt:
A1T4J2
LinkDB
All DBs
Position
1344387..1347872
Genome browser
AA seq
1161 aa
AA seq
DB search
MAGSRQIESTTNNSVPGAPNRISFAKLREPLEVPGLLDVQTESFEWLIGAEDWFQRAADR
GDVDPKGGLQEVLEELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAAPLFVTA
EFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDESIDKSTEK
TLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQIVERFGFSEI
MMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVN
KKLGLNVGQPITSSTLTEEDVVATIEYLVRLHQGDQTMTAPGGSEVPVEVDDIDHFGNRR
LRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLS
QFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEGPNIGLI
GSLSVYARVNPFGFIETPYRKVTDGVVTDQIDYLTADEEDRHVVAQANSPLDGDGHFEEE
RVLVRRKGGEVEFVSAAEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVP
LVRSEAPLVGTGMELRAAIDAGDVVVTEKAGVVEEVSADYITVMADDGTRHTYRMRKFAR
SNHGTCANQRPIVDAGQRVESGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYEDAIIL
SNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIIRIGAEVR
DGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSRED
DDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPDGTPVDIIL
NTHGVPRRMNIGQILETHLGWVAKAGWNIDVAAGTPEWAAKLPEQMLSAPADSIVATPVF
DGAQEGELQGLLGSTLPNRDGETMVNADGKATLFDGRSGEPFPYPVTVGYMYILKLHHLV
DDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTV
GRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLER
AAANLGINLSRNESASVEDLA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggcagggtcccgccagatcgagtcaaccactaacaactccgttcccggagcaccaaac
cgaatttcttttgccaagctccgtgagccgctcgaggttccggggcttctcgacgttcag
accgaatcgttcgagtggctgatcggcgcggaggactggttccagcgcgccgccgaccgc
ggcgacgtagaccccaagggcggtctgcaggaggtactcgaagagctctcgccgatcgag
gacttctccggctcgatgtcgctgtcgttctccgatccgcgcttcgacgaggtcaaggcg
ccggtcgacgagtgcaaagacaaggacatgacgtacgcggccccgctgttcgtcacggcc
gagttcatcaacaacaacaccggcgagatcaagagccagacggtcttcatgggcgacttc
ccgatgatgaccgagaagggcaccttcatcatcaacggcaccgagcgtgtcgtggtgagc
cagctggtccgttcgcccggtgtgtacttcgacgagtcgatcgacaagtcgacggagaag
acgctgcacagcgtcaaggtgatccccggccgcggcgcgtggctggagttcgacgtcgac
aagcgcgacaccgtcggtgtccgcatcgaccgcaagcgtcgtcagcccgtcaccgtgctg
ctcaaggcgctcggctggaccaacgagcagatcgtggagcgcttcggcttctccgagatc
atgatgagcacgctggagaaggacaacaccgcaggcaccgacgaggcgctgctggacatc
taccggaagctgcgtccgggcgagccccccaccaaggagtccgcgcaaaccctgctggag
aacctgttcttcaaggagaagcgttacgacctggcccgcgtcggccgctacaaggtcaac
aagaagctgggcctcaacgtcggccagccgatcaccagctcgacgctgaccgaagaggac
gtcgtcgccaccatcgagtacctggtccgcctgcatcagggcgaccagacgatgacggcg
cccggtggctccgaggtgcccgtcgaggtcgacgacatcgaccacttcggcaaccgtcgc
ctgcgcaccgtgggcgagctgatccagaaccagatccgggtcggcctgtcccgtatggag
cgcgtcgtgcgtgagcgcatgaccacccaggacgtcgaggcgatcacgccgcagaccctg
atcaacatccgacccgtcgtggcggcgatcaaggagttcttcggcaccagccagctgtcg
cagttcatggaccagaacaacccgctgtcgggtctgacccacaagcgccgcctgtcggcg
ctgggccccggcggtctgtcccgtgagcgcgccggcctcgaggtccgcgacgtgcactcc
agccactacggccggatgtgcccgatcgagacccctgagggtccgaacatcggcctgatc
ggttcgctgtcggtgtacgcgcgggtcaacccgttcggcttcatcgagacgccgtaccgg
aaggtgactgacggagttgtcaccgaccagatcgactacctgaccgccgacgaggaggac
cgccacgtcgtggcgcaggccaactcgccgctcgacggtgacggccacttcgaggaggag
cgcgtcctggtccgccgtaagggcggcgaggtcgagttcgtgtcggccgccgaggtggac
tacatggacgtgtcgccgcgccagatggtgtcggtcgccacggccatgatcccgttcctc
gagcacgacgacgccaaccgtgccctgatgggtgccaacatgcagcgccaggcggttccg
ctggtgcgcagcgaggcgccgctggtcggcaccggtatggagctgcgtgccgcgatcgac
gccggcgacgtggtcgtgaccgagaaggccggtgtggtcgaggaggtctccgccgactac
atcaccgtgatggccgacgacggcacccggcacacctaccggatgcgcaagttcgcccgc
tccaaccacggcacctgcgccaaccagcgcccgatcgtggacgccgggcagcgtgtcgag
tcgggtcaggtgctcgccgacggaccgtgcaccgagaacggtgagatggccctgggcaag
aacctgctcgtggcgatcatgccgtgggagggtcacaactacgaggacgcgatcatcctg
tccaaccggctggttgaagaggacgtgctcacctcgatccacatcgaagagcacgagatc
gatgcccgcgacaccaagctgggcgccgaggagatcacccgggacatcccgaacgtctcc
gacgaggtgctcgccgatctcgacgagcgcggcatcatccgcatcggcgccgaggtccgc
gacggcgacatcctggtcggcaaggtcaccccgaagggcgagaccgagctgaccccggag
gagcgcctgctgcgcgccatcttcggtgagaaggcccgcgaggtccgcgacacgtcactc
aaggtgccccacggtgagtcgggcaaggtcatcggcatccgggtgttctcccgcgaggac
gatgacgagctgcccgccggtgtcaacgagctggtccgcgtctacgtggcccagaagcgc
aagatctccgacggcgacaagctcgccggacgccacggcaacaagggcgtcatcggcaag
atcctgcccgtcgaggacatgccgttccttccggacggcaccccggtggacatcatcctg
aacacccacggtgtgccgcgtcgtatgaacatcggccagatcctggagacccacctcggg
tgggtggccaaggcgggttggaacatcgacgtcgcggccgggactccggagtgggcggcc
aagctgcccgagcagatgctctcggccccggccgacagcatcgtggccaccccggtgttc
gacggtgcccaggaaggtgagctgcagggtctgctcggctcgacgttgcccaaccgcgac
ggcgagacgatggtcaacgccgacggcaaggcgacgctgttcgacggccgcagtggcgaa
ccgttcccgtacccggtgacggtcggctacatgtacatcctgaagctgcaccacctggtg
gacgacaagatccacgcccgctccaccggtccgtactcgatgatcacgcagcagccgctg
ggtggtaaggcgcagttcggtggtcagcggttcggtgagatggagtgctgggccatgcag
gcctacggcgcggcgtacacgctgcaggagctcctgacgatcaagtccgatgacaccgtc
ggccgcgtcaaggtctacgaggcgatcgtcaagggcgagaacatcccggagccgggcatc
ccggagtcgttcaaggtgcttctcaaggagctgcagtcgctgtgcctcaacgtcgaggtc
ctgtcctcggacggtgctgcgatcgagatgcgtgacggtgacgacgaggacctggagcgt
gccgctgccaacctcggaatcaacctgtcccgcaacgaatccgcatctgttgaggatctt
gcgtag
DBGET
integrated database retrieval system
