Mannheimia varigena USDA-ARS-USMARC-1388: X875_50
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Entry
X875_50 CDS
T03029
Name
(GenBank) Pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
mve
Mannheimia varigena USDA-ARS-USMARC-1388
Pathway
mve00240
Pyrimidine metabolism
mve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mve00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
X875_50
Enzymes [BR:
mve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
X875_50
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Paralog
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GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
AHG78627
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All DBs
Position
5504..6412
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AA seq
302 aa
AA seq
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MNKYLALSQEVKDGIAKGLPIVALESTIISHGMPYPQNVKMAREVEQIIRENGAVPATIA
IVDGKIKIGLSDDELEMFGSSKGIAKVSRRDLAEIVASKRLGATTVATTMIAAELAGIKF
FVTGGLGGVHRGWEHNLDISADLDEFAQTNVTVICAGAKSILDLPATLEYLETKGVPVIG
YKTKNLPAFFCRDSGLPLPISSDDLQHIADTIKTKWELGLKGGVVVANPIPEEYALDPKY
IDNIIANAVQEAEEKGVVGKNITPFLLGKIVEMTGGKSLEANIHLVKNNAKVGAQLAVSY
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatatttagcgttatcacaagaagttaaggatggtattgcaaaggggttgcca
attgttgcattagaatcaacaattatttcccacggtatgccttatcctcaaaatgtaaaa
atggctcgagaagttgagcaaattatacgagaaaatggtgctgtacctgcaacaattgca
attgttgatggaaaaatcaaaattggtttatctgacgatgaactagaaatgtttggtagc
agcaagggtattgcgaaagtttcacgccgagatttagctgaaattgttgcatcaaaacgt
ttaggagcaacaacagttgcaacaacaatgattgcagctgaacttgcaggaattaaattc
ttcgttaccggtggattaggaggtgttcatcgaggttgggaacataatttagatatttca
gcggatttagatgaatttgctcaaaccaatgtaacggtaatttgtgcaggggctaagtca
attttagatcttcctgcaacattagaatacttagaaacaaaaggtgttcctgttattggt
tacaaaacaaaaaatttacctgctttcttctgccgtgatagtgggttacctctacctatt
tcttctgatgacttgcaacatattgcagatacaattaaaactaaatgggagttaggttta
aaaggaggtgtggttgtcgctaacccaattcccgaagagtatgctttagatcctaaatat
attgataatattattgcaaatgctgttcaggaagcagaagaaaaaggagtagtaggaaaa
aatattactccattcttattaggtaaaattgtagaaatgacaggaggtaaaagtcttgag
gcaaatattcatttagttaaaaataacgcgaaagttggagcacaacttgcggtcagttat
tttagttaa
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