Myxococcus virescens: ACN6A1_21035
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Entry
ACN6A1_21035 CDS
T11273
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mvh Myxococcus virescens
Pathway
mvh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mvh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACN6A1_21035 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvh03021
]
ACN6A1_21035 (rpoB)
03400 DNA repair and recombination proteins [BR:
mvh03400
]
ACN6A1_21035 (rpoB)
Enzymes [BR:
mvh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACN6A1_21035 (rpoB)
Transcription machinery [BR:
mvh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACN6A1_21035 (rpoB)
DNA repair and recombination proteins [BR:
mvh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACN6A1_21035 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
XWU82962
LinkDB
All DBs
Position
complement(5290649..5294875)
Genome browser
AA seq
1408 aa
AA seq
DB search
MPTQIQNNFRVRKTFAKIAKIIDIPNLINIQKQSYEKFLQADIAADKREDLGLQGVFKSV
FPIRDFNETSSLEFVSYHLERPKYDVDECHQRGMTYSAPIKVVVRLVVWDKDEETGAQSI
RDVKEQEVYFGEIPLMTQNGTFIINGTERVVVSQLHRSPGAFFDHDKGKSHSSGKLLYNA
RIIPYRGSWIDFEFDHKDLLYVRIDRRRKLPATVLIRALGAVPDTAKKNPLEFKGSTEEI
LNYYYATETIYLHSAEEFEKSVELELLPGQRATRDIKAKTGELIVKKNRKFTRAAIKKLE
AAKMKTLPIDADELFTKVSAYDVVEETNGVVLLECNEEVTQEKVDELLKHGIKEFKVLFI
DNLNVGPYLRETLMLDKLETPEQSIMEIYRRLRPGDPPTPETAINLFTNLFFNPERYDLS
KVGRLKLNFKFGLEEPLDGQILTKRDILEVIRYLIDLKNGKGTIDDIDHLGNRRVRAVGE
LLENQYRIGLVRMERAIKERMSLQEIETLMPHDLINAKPVTAVIKEFFGSSQLSQFMDQT
NPLSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLIASLSTY
ARVNEFGFVETPYRKVEAGVVTNDVAFYSALEEEKHTIAQANAETDKKGKFANALVSSRR
GGEFVQARAEDVDLMDVSPKQLVSVAASLIPFLENDDANRALMGSNMQRQAVPLLRTAAP
LVGTGIESIVARDSGVTCVARRDGIVESVDAGRIVVKADVPASLSDVTSEVDIYNLLKYQ
RSNQNTCLNQKPIISKGDRVKKGDVIADGPATETGELALGQNVVVAFMPWQGYNFEDSIL
ISERILKDDVFTSIHIEEFECIARDTKLGKEEITRDIPNVGEEALKDLDESGIIRIGAEV
KPGDVLVGKITPKGETQLSPEEKLLRAIFGEKAGDVRDSSLRVPPGVVGTVINAKVFSRK
GVEKDERAKQIESMEEAKLLKDQNDEIKVLQDSAFGRIRGLVRTKEVQGKLVDDKGKILL
KKGDILDDELLSTVPYKYWGEISVGDPLDSRLRDILRNLEETKEAVKLAFGEKIARIKKG
DELPPGVIKMVKVYVAIKRKLAVGDKMAGRHGNKGVVSRILPEEDMPYLEDGRPVDIVLN
PLGVPSRMNIGQILETHLGWAAKGTGEALQRYVEANWSSDAIKERLKVIYSDPAFGEFLD
KLDDEEIKQLCLRSKRGIHVATPVFDGAQETEIHALLDEGQLPRSGQMVLFDGRTGEPFD
QNVTVGVMYMLKLHHLVDEKIHARSIGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYG
AAYTLQEFLTVKSDDVVGRTRMYEAIVKGDNVLESGLPESFNVLLKELQSLALDVELLES
APPERQRSFGGDFLGGGDGEERKTGTEA
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgcagatccagaacaatttccgcgtgcggaagaccttcgcgaagatcgcgaag
atcatcgacattcccaatcttatcaacatccagaagcagtcctacgagaagttcctccag
gcggacattgccgccgacaagcgcgaggacctcggtcttcagggcgtcttcaagtcggtg
ttccctatccgcgacttcaacgagacctcctcgctggagttcgtgagctaccacctggag
cgcccgaagtacgacgtggatgagtgccaccagcgtggcatgacgtattcggcgcccatc
aaggtggtggtgcgcctggtcgtgtgggacaaggacgaggagaccggcgcccagtccatc
cgcgacgtgaaggagcaggaggtctacttcggcgaaatcccgctgatgacccagaacggc
accttcatcatcaacggtaccgagcgcgtcgtcgtcagccagctgcaccgaagccctggc
gccttcttcgaccatgacaagggcaagagccactcgtctggcaagctgctctacaacgcc
cgcatcattccctaccgcggttcgtggatcgacttcgagttcgaccacaaggacctgctg
tacgtgcgcatcgaccgccgccgcaagctgccggccacggtgctcatccgcgcgctcggc
gccgtcccggacaccgcgaagaagaacccgctggagttcaagggctccaccgaggagatc
ctcaactactactacgcgacggagacgatctacctccacagcgcggaggagttcgagaag
agcgtcgagctcgagttgctgcctggtcagcgcgcgacccgcgacatcaaggccaagacg
ggcgagctgatcgtcaagaagaaccgcaagttcacccgcgccgccatcaagaagctcgaa
gcggcgaagatgaagacgctcccgatcgatgcggacgagctcttcaccaaggtgtccgcc
tacgacgtggtcgaagagaccaacggcgtggtgctcctcgagtgcaatgaggaagtcacc
caggagaaggtcgacgagctcctcaagcacggcatcaaggagttcaaggtcctcttcatc
gacaacctcaacgtgggcccgtacctgcgtgagacgttgatgctggacaagctcgagacc
cccgagcagtccatcatggagatctaccgccgcctgcgtcctggcgatccgccgacgccg
gagacggccatcaacctgttcaccaacctgttcttcaacccggagcgctacgacctctcc
aaggtcggccgcctcaagctgaacttcaagttcggcctcgaggagccgctcgacgggcag
atcctcaccaagcgggacatcctcgaggtgatccgctacctgatcgatctgaagaacggc
aaggggaccatcgacgacatcgaccacctgggcaaccgccgcgtccgcgcggtgggcgag
ctgctggagaaccagtaccgcatcggcctggtgcgcatggagcgggcgatcaaggagcgc
atgagcctccaggagatcgagacgctcatgccgcacgatctcatcaacgccaagcccgtc
acggcggtcatcaaggagttcttcgggtccagccagctgtcgcagttcatggaccagacg
aaccccctgtccgaggtcacgcacaagcggcgcctgtcggcgctcgggcccggcggcctc
acgcgcgagcgcgcgggcttcgaggtgcgcgacgtgcacccgacgcactacggccgtatc
tgccccatcgagacgccggaaggtccgaacatcggcctcatcgcgtcgctgtccacctac
gcgcgcgtcaatgagttcggcttcgtcgagacgccgtaccgcaaggtcgaggcgggcgtg
gtgacgaacgacgtggccttctactccgccctcgaggaggagaagcacacgatcgcccag
gcgaacgcggagacggacaagaagggcaagttcgccaacgcgctggtgtccagccgccgc
ggcggtgagttcgtccaggctcgtgccgaggacgtggacctgatggacgtgtccccgaag
cagctcgtgtcggtggccgcgtcgctcatcccgttcctggagaacgacgacgccaaccgc
gcgctcatgggctccaacatgcagcgccaggccgttccgctgctgcgcaccgcggcgccg
ctggtgggcacgggcatcgagtccatcgtcgcccgcgactccggcgtcacctgcgtggcc
cggcgcgacggcatcgtggagagcgtggacgccggccgcatcgtggtgaaggcggacgtg
ccggcctcgctgagcgatgtcacgagcgaggtcgacatctacaacctgctcaagtaccag
cgctccaaccagaacacctgcctcaaccagaagcccatcatcagcaagggcgaccgggtg
aagaagggtgacgtcatcgccgacggtccggccaccgagacgggtgagctggcgctgggc
cagaacgtggtcgtcgcgttcatgccgtggcagggctacaacttcgaggactccatcctc
atcagcgagcgcatcctcaaggacgacgtcttcacgtcgatccacatcgaggagttcgag
tgcatcgcgcgcgacaccaagctgggcaaggaggagatcacccgcgacatcccgaacgtg
ggtgaggaggccctcaaggacctcgacgagagcggcatcatccgcatcggcgccgaggtg
aagcccggcgacgtgctggtgggcaagatcaccccgaagggcgagacgcagctgtctccc
gaagagaagctgctgcgcgccatcttcggcgagaaggccggcgacgtgcgtgacagctcg
ctgcgcgtcccgccgggcgtggtgggcaccgtcatcaacgccaaggtgttcagccgcaag
ggcgtggagaaggacgagcgcgccaagcagatcgagtccatggaggaggcgaagctcctc
aaggaccagaacgacgagatcaaggtcctccaggacagtgcgttcggccgcatccgcggc
ctggtgcgcaccaaggaggtccagggcaagctcgtggacgacaaggggaagatcctcctg
aagaagggggacatcctcgacgacgagctgctgtccacggtgccctacaagtactggggt
gagatctccgtcggcgacccgctggactcgcgcctgcgcgacatcctccgcaacctggag
gagacgaaggaggccgtgaagctggccttcggcgagaagatcgcccgcatcaagaagggc
gacgagctgccgccgggcgtcatcaagatggtgaaggtgtacgtcgccatcaagcgcaag
ctggccgtgggcgacaagatggccggccgccacggaaacaagggcgtcgtgtcccgcatc
ctccccgaggaggacatgccgtacctggaggacgggcgtccggtggacatcgtcctcaac
ccgctgggcgtgccctcgcgcatgaacatcgggcagatcctcgagacgcacctgggctgg
gccgccaagggcaccggcgaagcgctgcagcgctacgtcgaggccaactggagctcggac
gccatcaaggagcgcctcaaggtcatctacagcgacccggcgttcggcgagttcctcgac
aagctcgacgacgaggagatcaagcagctgtgcctccgctccaagcggggcatccacgtc
gccacgcccgtcttcgacggcgcacaggagacggagatccacgccctgctggacgagggt
cagctgcctcgctcgggccagatggtgctcttcgacgggcgcaccggtgagccgttcgac
cagaacgtcaccgtgggcgtcatgtacatgctgaagctgcaccacctggtggacgagaag
atccacgcccgctccatcgggccctactcgctcgtcacgcagcagccgctgggcggcaag
gcgcagttcggcggtcagcgtctgggcgagatggaagtctgggcgatggaggcctacggc
gcggcgtacacgctgcaggagttcctcaccgtcaagtcggacgacgtggtgggccgcacg
cgcatgtacgaggccatcgtcaagggcgacaacgtcctggagagcggcctgcccgagtcg
ttcaacgtgctcctcaaggagctccagtcgctcgcgctcgacgtggagctgctggagagc
gccccgccggagcggcagcgcagcttcggaggcgacttcctcggcggtggtgacggcgag
gagcgcaagacgggaaccgaggcctga
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integrated database retrieval system
