Candidatus Methanosuratincola verstraetei: ACO0C9_04555
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Entry
ACO0C9_04555 CDS
T10956
Symbol
prf1
Name
(GenBank) peptide chain release factor aRF-1
KO
K03265
peptide chain release factor subunit 1
Organism
mvj Candidatus Methanosuratincola verstraetei
Pathway
mvj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mvj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ACO0C9_04555 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mvj03019
]
ACO0C9_04555 (prf1)
03012 Translation factors [BR:
mvj03012
]
ACO0C9_04555 (prf1)
Messenger RNA biogenesis [BR:
mvj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
ACO0C9_04555 (prf1)
Translation factors [BR:
mvj03012
]
Eukaryotic type
Release factors
ACO0C9_04555 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_1
eRF1_3
baeRF_family10
acVLRF1
Ribosomal_L7Ae
TBPIP_C
baeRF_family2
FdhE_C
CapR
DnaJ_CXXCXGXG
Zn_ribbon_8
FYVE_2
Motif
Other DBs
NCBI-ProteinID:
XRH74792
LinkDB
All DBs
Position
complement(818967..820220)
Genome browser
AA seq
417 aa
AA seq
DB search
MSSTERSSLETYRLKKLIEELESKEGKATELISQYIPPNRQISDAMSNLREELGTSANIK
SKSTRKNVQDAIESIIQKLKLFRTPPKNGLVIFSGAIPRGGPGTEKIETYVIEPPEPISL
FLYRCDSKFYLDPIKEMLVEKEIYGLLVMDRSDATFALLKGRRIEIVETITSGSPSKHDA
GGQSARRFQRIVEIAAHEFYKRVAEHAEKIFLPIPNLKGIIIGGPGPTKNEFYEGNFLHY
QLQDKVLAVEDLSYTEEPGVYELVEKAKDVLKNVEFLKEKKLVQDFLYLLAKNSGQVTYG
EKEVREKLEKGAVKTLILSADLGTTRFKLRCIACGNTKEVTYTKQQIATMSRKEICEKCG
GTMEVEEEKSIIEELAELADKTNAKVEVVSTETDEGKMLMNSFGGVVAILRFSGQEQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgtctagcactgaaaggagctctcttgagacttacaggcttaagaagttgatagaggag
ctggagtccaaagagggaaaggcgacggagctgatatcgcagtacattccacccaatagg
cagatatcggatgcgatgtcgaacctcagagaggagctaggaacctcagctaacataaaa
tctaagtctactcgaaaaaatgttcaggatgcgatagagagcataatccaaaaattaaaa
ctgttcagaacccctccgaaaaatggcctcgtaatatttagcggggccattcctaggggt
ggacctgggaccgaaaagatcgaaacatacgtaattgaaccacccgagccaataagcctt
ttcctttacaggtgcgattctaaattttaccttgacccaatcaaggagatgctggttgag
aaagaaatctacggattactcgtgatggacaggagcgatgccacctttgcgctgttgaaa
ggtagaagaatagaaattgtagaaacgatcacctcaggaagcccgagcaagcatgacgca
ggagggcaatccgcgaggaggtttcagcgaatagtcgaaattgcagcgcatgaattttac
aaaagagtcgcagaacacgctgaaaagatcttcttaccaatacccaacctcaaggggatt
ataattggcggacctggacctaccaagaatgagttctacgaagggaactttttgcactat
caacttcaggacaaggtgcttgcggtagaggatctgagctacaccgaagagccaggcgtt
tatgagcttgtcgagaaggccaaggatgtactgaagaacgtagaatttctgaaggagaaa
aaactcgtgcaggatttcctttacctacttgccaagaacagcgggcaagtcacatatggt
gaaaaggaagttcgcgaaaagctggaaaaaggggctgtaaagaccctcattctttcagcc
gaccttgggactacgcgctttaaactaaggtgcatcgcatgcggcaataccaaagaggtc
acctacacaaaacagcagatcgcaacaatgtcaaggaaagagatttgtgaaaagtgcggc
ggaacaatggaagtcgaagaagaaaaaagcataatcgaagagctcgcagaacttgcagac
aaaacaaatgcaaaggttgaagtcgtttccacggagacggatgaggggaaaatgctgatg
aattcctttggtggcgtagttgctattctcaggttttcaggacaggagcagtag
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