Moritella viscosa: MVIS_4219
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Entry
MVIS_4219 CDS
T03770
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-N)
KO
K03092
RNA polymerase sigma-54 factor
Organism
mvs
Moritella viscosa
Pathway
mvs02020
Two-component system
mvs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MVIS_4219 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MVIS_4219 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mvs03021
]
MVIS_4219 (rpoN)
Transcription machinery [BR:
mvs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MVIS_4219 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CED62096
UniProt:
A0A090IIC8
LinkDB
All DBs
Position
1:4837489..4839000
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AA seq
503 aa
AA seq
DB search
MKPSLQLRMSQSLAMTPQLQQAIRLLQLSTLELQQEIQEALDSNPLLEQEDPNTTQPNGA
ESSDEHNLDNNDTVTDASQIEVSDALASEAMPDELPNDSNWDDVYTPQIQTHGSAGGGID
GLDQVYQGETSEGLYEHLMWQMELTPFTDTDRAIAVAIIDGIDDHGYLHQTCEDILSSVN
SDHQELSDSSSSEEQIELDEIEAVLKRIQHFDPIGVAARSLQECLLIQLQHLPKNTPWLT
ECQQIIQSHMDLLGNRDYRQLSRKTKLKEPQLKEIMQLIQSLEPRPGNVIDQTEGLYVIP
DVLVKKKNNQWVVELNPDIVPRLKVNNEYSNLSTGNRNSSDGQFIRTHVQEAKWFIKSLE
SRNETLLKVTKSIVQRQVDFFEYGDEAMKPMVLNDIAEEVEMHESTISRVTTQKFMHTPR
GIFELKFFFSSHVSTDNGGECSSTAIRALIKKLVAAENAIKPLSDSKIADLLADQGIKVA
RRTIAKYREALSIPPSNQRKSLL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatcattacaacttcgtatgagtcaatctctggcaatgacgccacagttgcaa
caagcgattcgattattacaattatcgaccttggagttacaacaagagattcaagaagca
ttagacagtaatccgctactggaacaagaagatcccaatacaactcagccaaatggtgca
gaaagtagcgatgagcataatctggataataacgacactgttaccgatgccagccaaata
gaagttagtgatgcactcgccagtgaagcaatgccagatgaactacctaatgacagtaat
tgggatgatgtctacactcctcaaatacagactcacggcagtgcgggtggcggtattgat
ggcttagaccaagtctatcaaggtgagaccagcgaaggcttatatgagcatctcatgtgg
caaatggaattaaccccctttactgacactgatcgtgctattgctgttgcgattattgat
ggcatcgatgatcatggttaccttcatcagacttgtgaagatatcctgtctagcgtcaat
agcgatcaccaagaactcagcgacagtagcagtagtgaagaacaaattgaattagatgaa
atcgaagcagtattgaagcgtattcagcatttcgatcccatcggcgttgctgcgcgctca
ttacaagaatgtttattgatccaactccagcatttacctaaaaacacaccttggttaaca
gaatgtcagcaaataattcagtctcacatggatttattgggcaatcgcgactaccgtcaa
ttaagccgtaagacaaaattaaaagaaccacaacttaaagagatcatgcaattaatacag
agtctagaacccagacctggcaacgtaattgatcagactgaagggctgtatgttattccc
gatgttttagtaaagaaaaaaaataatcaatgggtagtagagttaaatcctgacattgtg
ccaagattaaaagtgaacaatgaatattcaaacttgtcgacaggcaatcgtaatagcagc
gatgggcagtttattcgaactcatgtacaagaagctaaatggtttattaaaagcttagaa
agccgtaatgaaaccttactaaaagtaacgaaaagtattgttcaacgccaagttgatttc
tttgaatatggcgatgaagccatgaaacctatggttttaaatgatattgccgaagaagtg
gagatgcacgagtcaacgatttcacgggtaacaacgcagaagtttatgcatacaccacgt
ggtatttttgaacttaaatttttcttttcaagccatgtaagtactgacaatggcggagaa
tgttcatcaaccgctattcgtgcattaataaaaaaattggtcgcggcagaaaatgccatt
aaaccattaagtgacagcaagattgctgatttacttgctgatcaaggtatcaaagtggct
agacgtacgattgcaaaatatcgagaggcactaagtataccaccgtctaatcagcgtaaa
agcctattatag
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integrated database retrieval system
