Mycobacterium xenopi: MYXE_12450
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Entry
MYXE_12450 CDS
T06649
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mxe
Mycobacterium xenopi
Pathway
mxe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mxe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MYXE_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mxe03400
]
MYXE_12450
Enzymes [BR:
mxe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MYXE_12450
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MYXE_12450
DNA repair and recombination proteins [BR:
mxe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MYXE_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Ribosomal_S13
zf-TFIIB
NFACT_N
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
BBU21456
LinkDB
All DBs
Position
1273317..1274180
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEIEALAEHLRRHAVGETIGRVDVAAFSVLKTFDPPITALHGQTVAAAERWGKYLG
LRVGDLFFIAHLSRAGWLRWSDNLPATPLRPGKGPIALRVHLGAPGQGPGFDLTEAGTQK
RLAVWLVDDPARVPGIAALGPDALAISPDDLAGLLAGQSGRVKTVLTDQKVIAGIGNAYS
DEILHTARISPFATAAKLSREQVATLHDAMVSVLSDAVTRSVGQQAAMLKGEKRSGLRVH
ARTGLPCPVCGDTVREVSFADKSFQYCPTCQTGGKVLADRRMSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcctgagatcgaggcgctagccgagcatctgcgccggcacgcggtcggt
gagacaatcggccgcgtcgacgtcgcggcgttttcggtgctcaagacctttgacccgccc
atcacagcgctgcatggccagaccgtcgccgcagccgagcggtggggcaaatatctgggt
ctgcgggtcggcgacctgttcttcatagcccacctgtcacgggcgggctggctgcgctgg
tccgacaacctgcccgccacgccgctgcgcccaggtaagggaccgatcgcgctgcgtgtg
cacctgggcgcgcccggtcaggggcccggcttcgacctcaccgaggccggcacccaaaag
cggctggcggtgtggttggtcgacgaccccgcccgggtgcccggcatcgcggcattgggc
cccgatgcgctagcgatcagccccgacgacctggccggtctgctggccgggcagagcggc
cgggtcaagacggtgttgaccgatcagaaggtcatcgccgggatcggcaacgcctacagc
gacgagatcttgcacaccgcacggatttcgccattcgccacggccgcgaaactctcgcgt
gagcaggtcgccacgctgcacgacgcgatggtgtcggtgctcagcgacgcggtcacccgc
tcggtcggccaacaggccgcgatgctcaagggcgaaaagcgctctggattgcgggtgcac
gcccgtaccggtttgccctgtccggtgtgcggggacaccgtgcgtgaggtgtcgttcgcc
gacaagtcgtttcagtattgcccgacctgccagaccggcggcaaggtgttggccgaccgg
cggatgtcgcggctgctgaagtag
DBGET
integrated database retrieval system
