Myotis brandtii (Brandt's bat): 102260427
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Entry
102260427 CDS
T02920
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
myb
Myotis brandtii (Brandt's bat)
Pathway
myb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102260427 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myb03019
]
102260427 (CNOT1)
Messenger RNA biogenesis [BR:
myb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102260427 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102260427 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
102260427
NCBI-ProteinID:
XP_005873555
LinkDB
All DBs
Position
Un
AA seq
2383 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAGQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGAQAHTWNVEVLIDVLKELNPALNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMDVFPVDLIYRPWKNAEGQLSFIQHSLINPEIFC
FADYPCHTVVIDILKAPPEDDNREIATWKSLDLVESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVMALLQINSSWHSLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEHYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGIGTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHF
SKEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYR
FFPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDR
FKNRLKDYPQYCQHLASISHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQA
QAQAQVPTKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLV
ATDQTERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVS
IEPNFHSLYSNFLDTLKNPEFNKMVLTETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLG
MITLAKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTM
AIMNVLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPK
KDVKQPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTI
PLFQAHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIA
AHHMMRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNC
ELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLK
VGGVDPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELE
QHLHAIPPALAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADL
LLRYRECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQ
QYDLHLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRG
NAPEGLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWV
NLYHSAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRA
QAEQQHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGV
LLQDHDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPG
FVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYK
GTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVD
MLSEINIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQ
LINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQ
LRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNP
AFKFWNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagattttcatcagactcagtttctgattcaggagtgtgcttcg
ctgattacaaagccaaattttatctctacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcaccccacttatttgcccagctaagtaaagttctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctcttgaattcttccagctcagat
ctcagaggttttgctgcccagtttatcaaacagaagctcccagaccttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtg
ctacacctcctcctctcccatctcctctttgggcagaagggagccttcggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaggaacgctgtccc
gtggtgcttgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcaagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggttacagctggccaggtagcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggaattccattgcagagtatctctgctcctggcagtgggatt
tggagtgatggaaaagataaaagtgatggcgcacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagagctgaacccggctttgaatttcaaggaagtaacttatgaa
ctggatcatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcaaaggggtttgggtatggatgtgttcccagtagacctcatatatagaccttggaaa
aacgcagaaggccagctctcctttattcagcattcccttataaatccagagatcttctgt
tttgctgactatccctgtcatactgttgtcattgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacttggaagagcttggatttggttgaatctctactgaggctc
gcagaggtgggacaatatgagcaagtcaaacagctctttagcttccctatcaaacactgt
ccagacatgctggtaatggccttactacaaatcaacagctcctggcacagcttgcgccat
gaactcatctctactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctctatccgccaacttatcatgcat
gcaatggcagaatggtacatgcgaggagagcattatgaccaggccaaattgtctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacagataaaattcgagagcatggagagccttttatccaggcatgcatgactttttta
aagaggcggtgtccttctattttgggtggacttgccccagagaaagatcagcccaaaagt
gctcaacttcctccggaaactctggcaacaatgttggcctgtttacaagcttgtgcaggg
agtgtttctcaggaattatcagaaaccatcctcaccatggtagccaattgcagcaatgtc
atgaataaggccagacaaccgccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcctgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacacccagagtatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttctactcca
aatcaaacaactgcattcagtggtatcggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggtataggaactggggcgcttggactccctgcagtgaat
aacgatccttttgtacagaggaaactgggcacctctggactgaaccagcctacattccag
cagagtaagatgaaaccttcggacttgtctcaggtgtggccagaggcaaatcagcacttt
agtaaagagatagatgatgaagcaaacagctatttccagagaatatataatcacccacca
catccaaccatgtctgttgatgaggtattagaaatgctacagaggtttaaagactctacc
ataaagagggaacgagaagtatttaattgtatgctaaggaacttgtttgaagaataccgt
tttttcccccagtaccctgataaagagttacatataacagcctgcctgtttggtgggata
attgaaaaaggactggtcacttatatggcactaggcctggccctgcgatatgttcttgaa
gccttacgcaagccttttggatccaaaatgtattattttgggattgctgcactagataga
tttaaaaatagattgaaggactatccccagtattgtcagcacttggcttctatcagtcac
tttatgcaatttccacatcatttacaggagtatatcgagtatggacagcaatcgagagat
cctcctgtgaaaatgcagggctctatcacaacccctggaagtattgcactggctcaggcc
caggctcaggcccaggttcccacaaaagcacctcttgctgggcaggttagcactatggta
accacctcaacaaccactactgttgcaaaaacggttacagtcaccaggcctaccggagtc
agctttaagaaagatgtgccaccttctattaatactacaaatatagatacattgcttgtg
gccacagatcaaactgaaagaattgtagagccccccgaaaatatccaagagaaaattgct
tttatcttcaacaatctctcacagtcgaatatgacacaaaaggttgaagaactaaaggaa
acagtgaaggaagaattcatgccttgggtttcacaatacctggttatgaagagagtcagt
attgagccaaactttcacagcctgtattcaaacttccttgacacactgaagaatcctgaa
tttaataagatggttctaactgagacctacagaaacatcaaagtgctcttgacctctgat
aaagctgcagccaatttttcagatcgttctttgctgaagaacttgggacactggctagga
atgatcacactagctaaaaataaacccatcttacatactgacttggatgtcaaatctttg
ctgctagaggcttatgttaaaggacagcaagaattgctctatgtggtgcccttcgttgcc
aaagttttagagtctagcattcgtagcgtggtttttaggccacccaatccctggacaatg
gcaattatgaatgtattagctgagctacatcaggaacacgacttaaagttaaacttgaag
tttgagattgaggtcctctgcaagaaccttgcattagacatcaacgagctaaaacctgga
aacctcctaaaggataaagatcgcctaaagaacttagatgagcagctctctgctccaaag
aaagatgtcaagcagccagaagaacttcctcccatcacaaccacaacaacttctacaaca
ccagctactagtaccacctgcacagccactgttccaccacagccacagtacagctatcat
gacatcaatgtctattcccttgcaggcctggcaccacatattactctaaacccaacaatt
cccttgtttcaggcccatccacagttgaagcagtgtgtgcgccaagcaattgaacgggct
gttcaggagttggtccatcctgtggtggatcgatcaattaagattgccatgactacttgt
gaacaaatagtcaggaaggattttgccctggattctgaggaatctcgaatgcgaatagca
gctcatcacatgatgcgtaacttgacagctggaatggctatgattacctgcagggaacct
ttgctcatgagcatatccaccaacctgaaaaacagttttgcctcagcccttcgtactgca
tccccacaacaaagggaaatgatggatcaggcagctgctcagttagctcaggacaattgt
gaattagcttgctgttttattcagaagactgcagtggaaaaagcaggccctgagatggac
aagagattagcaactgaatttgagctgagaaaacatgctaggcaagaagggcgcaggtac
tgtgatcctgttgtgttaacataccaagctgagcggatgccagaacaaataagactgaaa
gttggtggtgtggacccaaagcagttggctgtttatgaagaatttgcacgcaatgtgcct
ggtttcttgcctacgaatgatttaagtcagcccacaggatttttagctcaacccatgaag
caagcttgggcaacggatgatgtagctcaaatttatgacaagtgcattacagaactagag
cagcacctacatgccatcccaccagctttggccatgaaccctcaagctcaggctcttaga
agtcttttggaggttgtagtattatctcgaaactctcgggatgccatagctgctcttgga
ttgctccagaaggctgtagagggcttactagatgccacaagtggtgctgatgctgacttg
ctgctgcgctacagggaatgccacctcttggtcttgaaggctcttcaagatggccgggcg
tatgggtcgccgtggtgtaacaaacagatcacaaggtgcctaattgaatgtcgggatgaa
tataaatataatgtggaggcagtggagctgctaattcgcaatcatttggttaatatgcag
cagtatgatcttcacctagctcagtcaatggagaatggtttaaactacatggctgttgca
tttgctatgcaattggtaaaaatcctgctggtggatgaaaggagtgttgcccatattact
gaggctgatctgttccacaccattgaaaccctcatgagaattaatgctcactccagaggc
aatgctccagaaggattgccccagctgatggaagtagtgcgatccaactatgaagcaatg
attgatcgtgctcatggaggccctaactttatgatgcattctgggatctctcaagcctca
gagtacgatgatcctccaggcctgagggagaaggcagagtatcttctgagggaatgggtg
aatctctaccattcagcagcagctggccgtgacagtaccaaagctttctctgcgtttgtt
ggacaggtagagcttttggaaagaaagatgcatcagcaaggaatcctgaagactgatgac
ctcataacaaggttcttccgtctctgcactgaaatgtgtgttgaaatcagttaccgtgcc
caggcagagcagcagcacaaccctgctgctaatcccaccatgatccgagccaaatgctat
cacaacctggatgcctttgtccgactcattgccctgttagtgaagcactcaggggaggcc
accaacactgtcacaaagattaacctgctgaacaaggtccttggtatagtagtgggagtt
ctcctacaggatcatgatgtccggcaaagtgaatttcagcagcttccctaccatcgcatt
tttatcatgctgctcttggaactcaatgcacctgaacatgtattggaaaccattaatttc
cagacacttacagctttctgcaatacattccacatcttgaggcctaccaaagctcccggc
tttgtgtatgcgtggcttgaattgatctcccatcggatatttattgcaagaatgctggca
catacgccacagcagaagggatggcctatgtatgcacagctactgattgatttattcaaa
tatttagcacctttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaag
ggcactttaagagtgctgctggttcttctgcatgatttcccggagttcctttgtgattac
cattatggattctgtgatgtgatcccacccaattgtattcagctaagaaacctgatcctg
agtgccttcccaagaaacatgaggctcccagacccattcactcctaatctgaaggtggat
atgttgagtgaaattaacatcgcaccccggattctcaccaattttactggagtgatgcca
cctcagttcaaaaaggatttggattcctatcttaaaactcggtcaccagtcacttttcta
tctgatctgcgcagcaacctacaggtatcaaatgagcctggcaatcgctataacctacag
ctcatcaatgcactggtgctctatgtcgggactcaggccattgcacacatccacaacaag
ggcagcacaccctcaatgagcaccatcacccactcggctcacatggacatattccagaac
ctggctgtagacttggacactgaaggtcggtatctcttcttaaatgcaattgcaaaccag
ctgcggtacccaaatagccacactcactacttcagctgcaccatgctgtacctttttgca
gaggccaacactgaagctatccaagaacagatcacaagggttctcttggaacggttgatt
gtaaataggccacatccttggggtctacttattaccttcattgagctgattaaaaatcca
gcatttaagttctggaaccatgaatttgtacactgtgccccagaaattgaaaagttattc
cagtccgtcgcacagtgctgcatgggacagaagcaggctcagcaagtaatggaagggaca
ggtgccagttag
DBGET
integrated database retrieval system
