Mizuhopecten yessoensis (Yesso scallop): 110442937 Help Entry 110442937         CDS       T05079                                  Name (RefSeq) 5'-3' exoribonuclease 1-like   KO K12618   5'-3' exoribonuclease 1 [EC:3.1.13.-] Organism myi  Mizuhopecten yessoensis (Yesso scallop) Pathway myi03008   Ribosome biogenesis in eukaryotes myi03018   RNA degradation Brite KEGG Orthology (KO) [BR:myi00001]  09120 Genetic Information Processing   09122 Translation    03008 Ribosome biogenesis in eukaryotes     110442937   09123 Folding, sorting and degradation    03018 RNA degradation     110442937  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:myi03019]     110442937    03009 Ribosome biogenesis [BR:myi03009]     110442937    03016 Transfer RNA biogenesis [BR:myi03016]     110442937    03036 Chromosome and associated proteins [BR:myi03036]     110442937 Messenger RNA biogenesis [BR:myi03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      110442937   mRNA degradation factors    5'-3' decay     5' exonucleases      110442937 Ribosome biogenesis [BR:myi03009]  Eukaryotic type   Pre-60S particles    RNases     110442937 Transfer RNA biogenesis [BR:myi03016]  Eukaryotic type   tRNA degradation factors    Rapid tRNA decay (RTD) pathway factors     110442937 Chromosome and associated proteins [BR:myi03036]  Eukaryotic type   Gene silencing    piRNA pathway     110442937 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12 dsrm Motif Other DBs NCBI-GeneID:  110442937 NCBI-ProteinID:  XP_021342502 LinkDB All DBs Position Unknown AA seq 2066 aa AA seqDB search MGVPKFYRWISERYPCLSEVVKEFQIPEFDNLYLDMNGVVHTCSHPDDGNPHFRITEEKI VADIFYYLEFLFRTIKPKKVFFMAIDGVAPRAKMNQQRGRRFRSARDAEELERKARESGE TLPTEKRFDSNCITPGTEFMVRLQEQLKYFVVNKISTDPLWQGVQVHLSGHETPGEGEHK IMDYIRHEKSKPNYDHNTRHCLYGLDADLMMLGLSCHEPHFSLLREEVKFGGKKDAKKPS TPEETTFHLLHLSLFREYLDFEFSVLKDKLPFGYDLERIIDDWIMMGFLVGNDFIPHLPN LHINHDALPLIWSTYINVLPRCGGYLHTGGKLHLDRFEIFMTELAKFDFEKFEETFADLK WLEGKVEKNPAKKKNHSAAMSKLIQRKQDDNQFAALVEESGVDMDEDFGDPLDGEGLQLA HLADIKPNSPSSMFEEEFRVHKRHYYMTKLEYEQFTDDVLREQAECYVRGIQWILYYYFD GVPSWSWYYPHHYAPFISDVKCFAGMDIQFERSTPFLPFQQLMAVLPSNSKDLLPKAYWN LMMMDSSEIIDFYPVNFQSDLNGKQQDWEAVVLIPFIDEKRLLTAMAKVEHLMSPSEKKR NCHSPSLCYDYVTDQLPPYPSSSPGTFPDVVHNYAYYPLTPHPHQELSQTCYITMPILCY DCVSDPLPPYPSSSPGTFPDVVHNYAKLTLIPKDEFQLPRHLIKKGMLEGTRQDVYFPGF PTFKHLPHKAYLKKEGVKVFTANSRGENMILSLVKGEEEDIKTVANSVLHNNVFVSWPHM IEVKVISVSDGNTRYELSTTKEAGQTRTRVTEEEMNKNDQIIWRKDVVAIRERYHDRLGV DVGQTHVSLRALPLVGRKYICGAHGKIVLEKQFASNPVTFLYQTSVKDLNVYDTSFCQFN TLGELFPAKEAVFMLGWPHYACQGEVVDIEDDSRVRINVSILEEPNLDNVENDQGFLGIQ YYPGYVIAPRLAITSHFLSRMTGCIMVTPGSPDNPNDRFKTNIGLNLKFTKRNEEVPGYT KRTDEGWTYSDKAMEVVGQYLAEFPEIWSYISSKDGGRGDNFYETDLFKEGSPYSLKKMT DFVKGLPCNSVKTMKAGAEILDQGVINAIEQEVQKIIEVNKRKQRRVKMQVKPHLLFKPM VGQGNMVPDQSVEFYLFDRVANVRKGYPVPFGLRGTVTGVHIEEKETDTIYDIVFDEEFP GGITLRCSPGKGYRMPKAAMINLSHGVRKNEKKTGKAAANQEALTKFLNKAYQQSLNNRQ QDVRPGSNNRQQDFRPGSNNNNNMSYAAASQGGRSDNRYSNQENYNDNRSYTKGEKQYQN SRAEQDNNWRAGKDSRQDFRGGANRQDSYRREGSKDNSQHSQMETQSDLHLKSFNQEGGA SSPKFVTPKVSQSGKPTPGKWDGAKGQTGKAFVEPQNSDFINMWQELKSSGNHDQTSTSG TSLSVAAAALDKLPKPSVPCAEGEKPLVTLATDHKESEQPLVTLATENEGSEQPLVTLAT DNEGPKLNLESLFSQASKVQQSVDNDQFSAMFKSLEISGQDSTVAEDGSIIIRSKSKSPA RDADAEIKQMLNIGLVKTSLEPGPGKQEADTTAPPSAKNYGRQMSVQELFDGVMQPAKHV ATAEVKQETVTGDDSHKSDPRPQGSTSSSQASTSMSNPPTGAYTSPNVSMPPGMVHPYPP PLQVPPPAMMQHQMTSQPQQQSPRYQTQSRGPPPGLQIAPQFRGHHQGNQQQKPARRNPV LELINWSKMMGLQEPKYDFGGKPGSFVCVVTLSNGHRFMGSKTRSKEEAAESAAGVMLVH LMPPQAMHPLMAPRAFGGMPAQMMQHPQFSSPNSAFKPVSPKEFIEQPRGHHAQPPNYRG NQSANQYSDNRYHQQQHQTHSHYHDSRGQHQTANQYQDNRNNNQGPNQGPYQGNTAQRQQ QKFSPNQRADNKVFSDSKDASPPKSNPFVPMQVTRKTPSKRRESESRDSNGQVIDTSPRS DVSLRSDGEGSRHEPHNTARDLFGGKPQKPMSSAQEPQGVTSALNGQIPREVTPAKSPRQ SHQPSKSPGQQQKRRPRMAAKFNMAQ NT seq 6201 nt NT seq  +upstreamnt  +downstreamnt atgggtgttccaaaattttacagatggattagtgaacgctatccatgtctgagtgaggtg gtaaaggagttccagattccagagtttgacaacctctatctggacatgaatggcgttgtt cacacatgttcacatccagacgatggcaacccacacttcaggatcacagaggaaaaaata gttgcagatattttctattatttagagtttctgtttcgcaccatcaaacctaagaaggtc ttcttcatggcaatagatggtgtggcccctcgggcaaagatgaaccaacagcgagggcgg agattcagatctgcacgagatgcagaagagttagagagaaaagcccgggagtcgggtgaa acacttccgactgagaaacgattcgactccaactgtattacaccaggtacagagttcatg gtacggctgcaggaacagctcaagtactttgtggtgaacaagatctccacagacccactc tggcaaggtgtgcaggtgcacttgtctggccacgagactccaggagaaggggaacataaa atcatggattacatacgtcatgagaaatccaagccaaattatgaccacaacacacgacat tgcttgtatggcctggacgcggatctgatgatgcttggtctttcatgccatgagcctcat ttctctttacttcgggaagaagtcaaatttggtggtaaaaaggatgcaaagaaaccgtct actccagaggagaccacattccacctgctacatctgtccttgttccgagaatatctcgac tttgaattttcagtgttgaaggacaagctaccctttgggtacgatctagaaaggattatc gatgactggattatgatgggttttttggtgggaaacgacttcatacctcatcttcctaac ttacacattaaccacgacgccctgccactcatctggtcgacatatatcaacgtattacca cgctgtggaggttacctacataccggcggcaaactgcaccttgacagatttgagatcttc atgacagaattagccaagtttgactttgaaaaatttgaagagacatttgcggatctgaaa tggcttgaaggcaaagtggagaaaaaccctgcaaagaagaaaaatcactctgcagcgatg agcaaacttatacagagaaaacaggatgacaaccagtttgcagccctggtggaggaaagt ggagtggatatggacgaggactttggagacccgttagatggtgaaggattacaattagca cacctagctgacatcaaacctaacagtccgagttctatgtttgaggaggagttccgggta cacaagcgacattactacatgactaaactagaatacgagcagtttacagatgacgtacta agagaacaagctgagtgctatgtacgaggcatacagtggatcctgtattactactttgat ggcgtgccgtcctggagctggtattaccctcaccactatgcaccattcatcagcgatgtc aagtgtttcgcggggatggatatccaatttgagcgcagtacacccttcctgccattccag caactgatggcggtactgccgtctaacagcaaggacctgctgcccaaagcttactggaat ctcatgatgatggacagctccgaaatcattgacttttaccccgtcaacttccaatctgat ctcaacggaaagcagcaggactgggaggctgtggtcctcattccattcatagatgagaaa cgtttgcttactgccatggcaaaagtagagcacctgatgagcccttcagagaaaaaaagg aattgtcatagcccaagcctgtgttacgactatgtgaccgatcagttacccccctacccc tcatcctcaccaggaactttcccagacgtggtacataactatgcttattacccccttacc cctcatcctcaccaggaactttcccagacgtgctacataactatgccaatactgtgttat gactgtgtgtctgatccattacccccctacccctcatcctcaccgggaactttcccagac gtggtacataactatgccaaattaactctgattccgaaggatgaattccagctaccccgc catctcatcaagaaaggaatgctggagggaaccagacaggatgtgtacttccccggcttt ccaaccttcaagcacctccctcataaggcctatctgaagaaagagggtgtgaaagtgttc acggccaacagtcgcggcgagaacatgattctctcactagtaaagggtgaagaggaggat ataaaaactgttgccaactctgtgctgcacaacaacgtgtttgtgagctggccacacatg atagaggtcaaggttatctccgtctccgatggcaacacaagatacgagctaagtactacg aaggaggcaggtcagacaaggaccagagtaacggaggaggagatgaacaagaatgaccaa attatctggaggaaggatgtcgtagccattagagagagatatcatgaccgccttggagtg gacgtgggacagacacatgtatctctcagggcattgcctctcgtaggaaggaagtacatc tgtggagcacatgggaagatcgtactagagaaacagtttgccagtaatcctgtgacattt ctgtaccagacatcggtcaaggacctaaatgtgtatgacacatccttctgccagtttaac accctgggagaactctttcctgctaaggaagcagtgttcatgctgggctggcctcactac gcatgtcaaggagaagtggttgacatagaagacgactcccgagtgagaattaacgtttcc atcctggaggaacctaacctagataatgtggaaaatgaccagggtttcttgggcattcag tattatccaggctatgtcattgcccctcgacttgctatcacttcccacttcctgtcacgg atgactggctgcatcatggtgacccctgggtcgcctgacaatccaaatgaccgcttcaaa actaacattggtctaaacctaaagtttaccaagcggaatgaggaggtccctgggtacaca aagagaacagatgaaggatggacatactccgacaaagccatggaggtggtcggacaatac cttgctgaatttccagaaatatggtcctatatcagttctaaagatggaggcaggggagat aacttctatgagacagaccttttcaaggagggcagtccatacagcttgaagaagatgaca gattttgtaaagggactgccttgtaatagcgtgaagacaatgaaagctggggccgaaata ctagaccagggtgtcatcaacgccattgagcaggaagtgcaaaagatcattgaagtcaac aaacggaaacagcgcagggtgaagatgcaagtgaagccacatctgttgttcaagccaatg gttgggcaggggaacatggtaccagaccagtctgtggagttctacctgtttgacagagta gccaatgtacgtaaaggctatccagtaccgttcggtctgaggggcactgtcaccggagtc catattgaggagaaggaaacggacactatatatgacattgtgttcgatgaagagttccca ggcggaatcactcttaggtgttcgccaggtaaaggctacagaatgcctaaagcagcaatg attaacttatctcacggggtaaggaagaatgagaaaaaaactggaaaggcagccgccaat caggaggcacttacaaaatttctaaataaagcctatcagcagtccttaaacaacaggcag caggacgtccgacccggatcaaacaacaggcagcaggacttccgacccggatcaaacaac aacaacaacatgtcttatgcagcagctagtcagggaggtagaagtgacaatcgctatagt aaccaggaaaattacaatgacaatagatcctatacaaaaggagagaaacagtatcagaac tctcgtgcagaacaggataacaactggagagccggaaaggattctagacaagactttagg ggaggtgcaaataggcaggacagctacagaagggagggaagtaaagacaacagccaacac tcacagatggaaacgcagtcagatttacacttgaaaagctttaaccaagaaggaggggca tcatccccgaagtttgtcactcctaaggtcagccagtctggtaaaccgacaccgggcaag tgggacggggccaaaggtcaaacaggaaaggcttttgtggaacctcagaactcggatttc attaatatgtggcaagaattaaaatcttctgggaaccacgatcaaacgtcgacatcagga acatccctcagtgtggctgcagctgccctggacaaactgcccaagccctctgtgccgtgt gcagaaggtgaaaaacccctagtaactctagcaacagaccataaggagtcagaacagcct ctagtgactctagcgacagaaaatgaggggtcagaacaacccctagtgactctagcaaca gacaatgaggggcccaagcttaatttggagagcctgtttagccaggccagcaaagtgcaa cagagtgtggacaatgatcaattcagtgcaatgttcaaatctctggagatatctggtcag gattccacagttgcggaggatgggtcaattataattcgtagcaagagtaaaagtccagcc agggacgctgatgctgaaatcaaacaaatgttgaacattggtttggtgaaaacatcactg gagcctggacctgggaaacaggaagctgatacaacagcgccacctagtgctaaaaactat gggagacagatgtccgttcaggaattatttgatggtgtgatgcagccagctaagcatgta gcgacagccgaggtaaaacaggagacagtcactggtgatgactcccacaaatctgacccc cgaccccagggatcgacaagttccagccaagcttccacttcaatgtccaacccacccaca ggggcctacacaagtcccaatgtatccatgcccccaggaatggttcatccttaccctcca ccattacaggttccacccccagccatgatgcagcatcagatgactagtcagccccagcaa cagtctccacggtaccagacccagtccaggggacccccacctggtcttcagatagcccca cagttcagaggtcatcaccaaggaaaccaacaacagaaaccagcacgaaggaacccagtg ctggagttaattaactggagtaagatgatgggtctacaggaaccgaaatacgattttggt ggcaagcctgggtccttcgtctgtgtagtaactctctccaatggacataggttcatgggg tcaaaaacaaggagtaaagaagaggcagctgaaagtgctgctggtgtaatgcttgttcac ttgatgcctcctcaagccatgcaccctttgatggcaccaagggcgttcggtgggatgcca gcccagatgatgcagcaccctcagttctcctcaccaaactctgccttcaaacctgtctca cctaaagaatttattgaacaacctagaggtcatcatgcacaaccacccaactatcgtgga aaccaatcagccaatcagtattcagataacagataccatcaacagcagcaccagacacat tctcactatcatgatagccgagggcagcaccagacagccaatcaatatcaagataacaga aacaacaaccaaggacccaatcagggtccatatcagggcaatacggcacaaagacaacag cagaaattctcgcccaatcagagagcggataacaaagtcttcagtgacagcaaagacgcc tctcctccaaaatccaatccgtttgtacctatgcaggtcacccgtaaaaccccaagtaag cgacgggaatcagaaagtagagacagtaacggacaggtaattgacacaagtccaagatca gatgttagtctaaggtcagatggggaaggcagcaggcacgaaccccacaacacggcccgc gacttgtttggtggtaaacctcagaagcccatgtcttctgcacaggagccgcaaggtgta acgtcagcgttaaacggacagattccaagggaagtaactcccgctaaatctccacgacaa agccaccagccatcaaaatctcccgggcagcaacagaaacgtcgacccagaatggctgcc aagttcaacatggctcaataa

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