Mizuhopecten yessoensis (Yesso scallop): 110463501
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Entry
110463501 CDS
T05079
Name
(RefSeq) non-canonical poly(A) RNA polymerase PAPD7-like isoform X1
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
myi
Mizuhopecten yessoensis (Yesso scallop)
Pathway
myi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
myi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110463501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myi03019
]
110463501
03016 Transfer RNA biogenesis [BR:
myi03016
]
110463501
Enzymes [BR:
myi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
110463501
Messenger RNA biogenesis [BR:
myi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
110463501
Transfer RNA biogenesis [BR:
myi03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
110463501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
TUTase
Polbeta
PAP_NTPase
Herpes_LAMP2
Motif
Other DBs
NCBI-GeneID:
110463501
NCBI-ProteinID:
XP_021373809
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MDPRIAWYPPEQLGVAHDVWTRIIEAQIGVDNMSLNNSNPNLDHKPAEFIPLDITNNFDH
KSAPTNRQNSIHNQENSFKRKRDNRASTYGLNHSSYKHLLKEDGGLTPWKPKKKKYQPDV
IGLHEEIKDFFMYMSPTQEEANMRAEVVQRIRSVVKDLWKDASVEIFGSFKTGLYLPTSD
IDLVVFGKWKSPPLFMLQKALLDKGYTDHASIKVLDKASVPIVKLTDLQTDIKVDISFNT
KNSVESATLIKNFMEQFPNLKYLVLVLKQFLLQRDLNEVFTGGISSYSLIYLTVSFLQLH
PRYDATSPEANLGVLLIEFFELYGRNFNYINTGIRIKKGGAYIRKEEIQKSMDSGYRPSL
LCIEDPLTEGNDIGRSSYGAMKVKQSFEYAYLVMTYTVMPQNSHILRPNHSILGRIVRVT
DEVVDYRKWIKDTFPIFIANNPMIQPSPDNRSCNSDSKNNNTSNNLNNNNNTTRSYASVA
NSSPKHGTEAGDVKNRQGNGSVKVSEGPMESIEQSDSSSPYQSSSTSSPNNSCSSSLTSD
TDSEPDPQHQQEPVKNTTVQPTTTTTTTTTKSSPRSATVATREFVRSRDYSKQHGGGPSK
SRDASSSSVSSTRSNNSSYTPRGTPSNTPATVPNHEHSVVEAVPKYAPQNTAGPAGHTGH
SSQSGSQGGGPGGKGNRYPPGGHQGSKVYCRSQGKRRKNSVGGGSVGQGQGSHTLHSGGP
SNNYNRGGSGRRDFNQNNTNSAR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagaattgcttggtatccgccggaacagttaggagttgctcatgatgtgtgg
acaaggataattgaggctcagataggcgttgataacatgtctctcaataactctaaccct
aacttggatcataagcctgccgagtttattcctcttgatataacgaacaattttgaccat
aagtctgctccgacgaatcgacagaatagtatccataatcaggaaaacagtttcaaacga
aaaagagacaatcgtgccagtacatacggtttgaaccattcgtcgtacaagcatttatta
aaggaagatggcggcctcaccccttggaagcccaagaaaaagaaatatcaaccagatgtc
attggtctgcatgaggaaatcaaggatttcttcatgtacatgtctccaacacaagaggaa
gccaacatgagggcagaggtcgtacagaggatacggtcggtggtcaaggacctctggaaa
gatgcttcggttgaaatttttggcagcttcaaaacgggcttatacctacccacaagtgat
atagatctggttgtgtttgggaagtggaaatctcctcctctgttcatgctacagaaagca
ctccttgacaagggctacactgatcacgcctcgatcaaggtgttggacaaggcttccgtc
cctatagtcaaactcacagacctgcagaccgacatcaaggtggatatcagctttaatacc
aagaactcggtggaaagtgctacactgatcaagaacttcatggagcagttcccaaacctg
aagtacctggtgttggtgttgaagcagttccttttacagcgggacctcaacgaggtgttt
actggtggtattagttcctacagcctcatctacctgactgtcagcttcctccagcttcat
ccccgctacgatgccacaagtccagaagcaaatctcggagtactgctgatagaattcttc
gaactttatggaaggaacttcaactacatcaacaccggcatacgcatcaagaagggtgga
gcctacatcaggaaggaggagatacagaagagcatggatagcggctacaggccatccctt
ctttgtatagaggatcccctcacagagggtaacgacattggtcgtagttcgtatggtgct
atgaaagtcaaacagtcatttgagtatgcctacctagtcatgacgtacactgtgatgcca
cagaacagccacatactccgaccaaatcacagtatactgggtaggatagttcgagtaacc
gatgaggtggtagactatcgaaagtggatcaaggacaccttccccatcttcatcgctaac
aaccccatgatacagcctagccctgacaaccgcagctgtaacagcgactcgaaaaacaac
aatactagcaataacctgaacaacaacaacaacacaacacgcagctatgctagcgtggcc
aacagcagtccaaaacatggcacagaggctggagatgtaaaaaacagacaaggcaatggt
agtgtgaaggtctccgaaggtcctatggaatctattgagcagtcggactctagctcgccc
taccagtcctcttctacctcctcccccaacaacagttgtagttccagcctcaccagtgac
acagactccgagcccgaccctcagcatcagcaagaaccagtcaagaacacaacagtccag
cccaccaccaccaccacgactaccaccaccaagtccagtccccgctccgccaccgtcgcc
acccgtgagtttgtgcgaagtcgagactacagtaagcagcatggtggcggtccaagcaag
tcgcgggatgccagctctagcagtgtgtcgtccacacgttccaacaacagttcctatact
ccacggggcacacccagtaatacaccagctacggtgcccaatcatgaacactcggtggtg
gaggccgtaccaaagtatgcaccccaaaacaccgctggcccggcgggtcacacaggacat
tctagtcagtctggttcccagggtggcggccctgggggtaaagggaaccgctatcccccc
gggggacaccagggcagcaaggtgtactgccgatctcaaggcaagcgccgcaaaaacagt
gtcggtggcggcagtgtaggacaaggtcagggttcacacacgttacattcaggtggccct
agtaacaattacaacagaggaggcagtggccgtagagatttcaaccaaaataacaccaac
agtgccaggtaa
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