Mycobacterium intracellulare subsp. yongonense: OEM_34680
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Entry
OEM_34680 CDS
T02732
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
myo
Mycobacterium intracellulare subsp. yongonense
Brite
KEGG Orthology (KO) [BR:
myo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OEM_34680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myo03021
]
OEM_34680
Transcription machinery [BR:
myo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OEM_34680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Nop14
Motif
Other DBs
NCBI-ProteinID:
AGP65003
UniProt:
S4ZC77
LinkDB
All DBs
Position
3719583..3721049
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AA seq
488 aa
AA seq
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MKRTATKSASSPAKRPAAKAANGSAPAKRAAKTTARSTKSAAAEPAKKTRAKGAEAKGRG
TKTAKGGPADPDALDSDGAVEDLDNEPDLEGEPGEDLDIDSDLSLDDLEDDVASEDAEVE
SGDSEEGDDEEAPAPAAAAEPAADEDDEIAEPTEKDKASGDFVWDEDESEALRQARKDAE
LTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQLMTEMTERGDKLPAAQRRD
MQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKG
YKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPEELA
KEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQL
QSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRS
QVLRDYLD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgcaccgccacgaagtctgcgtcgtcccccgccaagcgtccggcggccaaggcc
gccaacggctccgcgcccgccaaacgggccgccaagacgaccgcgcggtccaccaagtcc
gccgccgccgagcccgccaagaagacgcgggccaagggcgccgaggccaagggccgcggc
accaaaacggccaagggcggccccgcggatcccgacgccctcgattccgacggcgccgtc
gaggatctcgacaacgaaccagacctcgagggtgagcccggcgaggacctcgacatcgac
agcgacctgtccctcgacgacctcgaggacgacgtggcgtccgaagacgccgaggtcgaa
tcgggcgattccgaggagggtgacgacgaggaggcgcccgcccccgcggcggccgccgag
cccgccgccgacgaggacgacgagatcgcggagcccaccgaaaaggacaaggcctccggc
gatttcgtctgggacgaggacgaatccgaggcgctgcgccaggcccgcaaggacgccgag
ctcaccgcctccgccgactccgtccgcgcgtacctcaagcagatcggtaaggtcgcgctg
ctcaacgccgaggaagaggtcgagctggccaagcggatcgaggccggcctgtacgccacg
cagctgatgaccgagatgaccgagcgcggcgacaaactgccggccgcccagcgccgcgac
atgcagtggatctgccgcgacggcgaccgcgccaaaaaccatctgctggaggccaacctg
cggctggtggtgtcgctggccaagcgctacacgggccgcggcatggcgttcctcgacctc
atccaggaaggcaacctgggtctgatccgcgcggtcgagaaattcgactacaccaagggc
tacaagttctccacgtacgccacctggtggatccgtcaggccatcacccgggccatggcc
gaccaggcccgcaccatccgcatccccgtgcacatggtcgaggtgatcaacaagctgggc
cgcatccagcgcgagctgctgcaggacctgggccgcgagcccacgcccgaagagctggcc
aaggaaatggacatcacgcccgaaaaggtgctggagatccagcaatacgcgcgcgagccg
atctcgctggaccagaccatcggcgacgagggcgacagccagctgggcgatttcattgag
gacagcgaggccgtggtggccgtcgacgcggtgtcgttcacgctgctgcaggaccagttg
cagtcggtgctcgagacgctctcggagcgcgaggccggcgtggtgcggctgcgcttcggc
ctcaccgacggccagccccgcaccctggacgagatcgggcaggtgtacggggtgacccgc
gagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccaccccagccgctcg
caggtgctgcgcgactacctcgactag
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