Myroides sp. A21: MYRA21_0686
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Entry
MYRA21_0686 CDS
T03521
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
myr
Myroides sp. A21
Pathway
myr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
myr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MYRA21_0686 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
myr03021
]
MYRA21_0686 (rpoB)
03400 DNA repair and recombination proteins [BR:
myr03400
]
MYRA21_0686 (rpoB)
Enzymes [BR:
myr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MYRA21_0686 (rpoB)
Transcription machinery [BR:
myr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MYRA21_0686 (rpoB)
DNA repair and recombination proteins [BR:
myr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MYRA21_0686 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AJA67878
LinkDB
All DBs
Position
complement(712883..716695)
Genome browser
AA seq
1270 aa
AA seq
DB search
MITNQTERLNFASTKNIPAYPDFLDIQVKSFKDFFQLETKSEERGKEGLYNTFMENFPIT
DTRNQFVLEFLDYFVDPPRYSIEECIDRGLTYSVPLKARLKLYCTDPEHEDFETIVQDVY
LGTIPYMAPSGTFVINGAERVVVSQLHRSPGVFFGQSFHANGTKLYSARVIPFKGSWIEF
ATDINSVMYAYIDRKKKLPVTTLFRAIGFERDKDILEIFDLAEEVKVSKTGLKKYSGRRL
AARVLNTWHEDFVDEDTGEVVSIERNEIILDRDTVLDKDNIEEIIEANVKTILLHKEDNN
QADYAIIHNTLQKDPTNSEKEAVEHIYRQLRNAEPPDEETARGIIDKLFFSDQRYNLGEV
GRYRMNKKLNLDTPIDKQVLTKEDIITIVKYLIELINSKAEIDDIDHLSNRRVRTVGEQL
SAQFGVGLARMARTIRERMNVRDNEVFTPIDLINAKTLSSVINSFFGTNQLSQFMDQTNP
LAEITHKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLAVYAK
VNNMGFIETPYRPVTEGQVDIVNDPIYLSAEEEEGMLIAQANIPVDEKGFITEQKVVVKE
EGDFPVVEPKDVHYTDVAPNQIASISASLIPFLEHDDANRALMGSNMMRQAVPLLRPESP
IVGTGLERQVASDSRVLINAEGEGTVEYVDAQKIIIKYDRTDEERLISFDPDEKTYNLIK
FRKTNQSTSINLKPIVRRGDRVTKGQVLCEGYATQQGELALGRNMKVAFMPWKGYNFEDA
IVISERVVREDIFTSIHIDDYTLEVRDTKLGNEELTNDIPNVSEEATKDLDENGMIRIGA
EVKPGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDVKDASLKASPSLRGVVLDKKLFA
RAVKDKRKRSKDKDELALLETRFEVKFNELKERLVEKLFFIVNGKTSQGVLNDLGEEILP
KGKKFTQKMLFAVDDFAHLTKGQWTTDEDTNGMITDLIHNYKIKLNDLQGVLRREKFMIT
VGDELPSGILKLAKVYIAKKRKLRVGDKMAGRHGNKGIVARIVRDEDMPFLEDGTPVDIV
LNPLGVPSRMNIGQIYETVLGWAGQKLGKKYATPIFDGAELDQINALTDEAGIPRFGHTY
LYDGGTGERFHQRATVGVIYMLKLGHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFG
EMEVWALEAYGASSTLREILTVKSDDVIGRAKTYEAIVKGETMPEPGLPESFNVLMHELK
GLGLDIRLEE
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgatcacaaatcagactgaaagattaaattttgcctctacaaagaatatacctgcatat
ccagatttcttggatattcaagttaagtcttttaaagatttctttcaattagaaacgaaa
tctgaagagagaggtaaggaaggtttatacaataccttcatggagaacttcccgatcact
gatacaagaaaccagttcgtattggagttccttgattactttgttgatcctcctcgttat
tcaatcgaagagtgtattgatagaggattaacttacagtgttccgctaaaagcgcgttta
aaattgtactgtactgatcctgaacacgaagattttgaaacaatagttcaagatgtttat
ttaggaacaattccgtatatggcgccaagtggtactttcgtaatcaatggagcagagcgt
gttgtagtttcacaattacaccgttcacctggtgttttctttggacagtcattccatgca
aatggaactaagttatattcggcgagagtaattccttttaagggatcatggattgagttt
gctaccgatattaatagtgtaatgtacgcttatatcgatagaaagaaaaagttacctgtt
acaacattattccgtgctattggattcgaaagagacaaggatatcctagagattttcgac
ctagcagaggaggttaaagtatcaaaaacaggactaaaaaaatatagcggaagacgtctt
gcagcacgtgtgttaaacacttggcatgaggatttcgtagatgaggatacaggagaagtt
gtttcaattgagagaaatgagattatcttagaccgtgatacagtcctagataaagataat
atcgaagaaatcattgaggctaacgttaagacgatccttttacataaagaagataataat
caggcagattatgccatcatacataatacattacagaaggatcctactaactctgaaaaa
gaggcagtagagcacatctaccgtcagttgcgtaatgcagaaccgccagatgaggaaact
gcacgtggtattattgataaattgttcttctcagatcaacgttacaatctaggtgaagtt
ggtcgttatagaatgaacaagaaacttaatcttgatactccaattgacaaacaagtttta
acaaaagaggatattatcactattgttaaatacttgattgaattaattaactcaaaagct
gagattgatgatatcgatcacttatctaaccgtcgtgttagaacagtaggagaacaatta
tctgctcagtttggtgttggtttagctcgtatggctagaactattcgtgagcgtatgaac
gtacgtgataacgaggtgtttactccaatcgacttaattaacgctaagactttatcgtca
gttattaattcattcttcggaacgaaccagttatctcaattcatggaccaaacgaatcca
ttagctgagattacacacaaacgtcgtttatcagctttaggacctggaggtttatctaga
gaaagagcaggtttcgaggtgcgtgacgttcactatactcactacggacgtttatgtcct
attgagacaccagagggaccaaacattggtttgatttcatctttagcagtttatgctaaa
gtaaataatatgggattcatcgaaactccttaccgtccagttactgaagggcaagtagat
atcgttaatgatcctatttatttaagtgcagaagaggaagaaggtatgttaatcgctcaa
gcgaacattcctgttgatgaaaagggatttatcactgagcaaaaagtagtagtaaaagaa
gagggtgacttccctgtagttgagccaaaagatgttcactatactgacgttgcaccaaat
cagattgcttctatttctgcttcattgattcctttcttagagcacgatgatgccaaccgt
gcgttgatgggatcgaacatgatgcgtcaagcagttcctttattacgtccagaatctcca
attgttggtactggattagaaagacaagtagcttcagattctcgtgttttaattaatgct
gaaggtgaaggtactgttgagtatgttgatgctcagaagatcatcattaagtatgatcgt
actgatgaggagcgtttaattagctttgatccagatgagaaaacatacaacttaattaag
tttagaaaaacgaatcaaagtacaagtatcaacttaaagccaatcgtaagaagaggtgat
agagttactaaaggacaagtactttgtgaaggatatgctactcaacaaggagagcttgct
ctaggtcgtaatatgaaagtggcgttcatgccatggaaaggttacaacttcgaggatgct
atcgttattagtgaaagagtagtacgtgaagatatctttacatctatccatattgatgac
tatactttagaagttagagatactaagttaggtaacgaagagttaactaatgatatccct
aacgtttctgaagaggcaacaaaagacttagatgaaaacggtatgatccgcattggtgct
gaagttaagcctggtgatattcttatcggtaagatcactccaaaaggagagtctgatcct
actccagaagagaaattattacgtgctatctttggtgacaaagcaggagacgttaaagat
gcttcattaaaagcttctccatcattaagaggggttgttttagataaaaaattgttcgca
agagcagtaaaagataaacgtaaacgttctaaggataaagacgaattggctttattagaa
actagatttgaagttaaattcaacgagttaaaagagcgtttagttgagaaattattcttc
atcgtgaatggtaaaacatctcaaggtgtattgaatgatttaggagaagagattttacca
aaaggtaagaaatttactcaaaaaatgttatttgcagtagatgatttcgctcacttaact
aaaggacaatggacaactgatgaggatacaaacggtatgattactgatttaatccacaac
tacaaaatcaaattaaacgatcttcaaggagttctaagaagagagaaattcatgattact
gtaggggacgagttaccatctggaattttgaaattggcgaaagtatatattgctaaaaaa
cgtaaattacgtgtaggagataagatggctggacgtcacggtaacaaaggtattgtagct
cgtatcgttagagatgaggatatgcctttcttagaagatggaacaccagtagatatcgta
ttgaacccattaggggtaccttctcgtatgaacattggacagatttatgaaacagtacta
ggatgggctggtcaaaaacttggtaaaaagtatgcgactccaatctttgatggtgccgaa
ttagatcaaatcaatgctcttacagatgaggcaggtataccacgttttggacacacttac
ttatatgatggaggaacaggagaaagatttcaccaacgtgcaactgttggggttatctat
atgctgaaacttggtcacatggtagatgataagatgcacgcgcgttctattggtccttac
tcattgattacgcaacaaccattaggaggtaaagctcagtttggtggtcaacgtttcgga
gagatggaggtttgggcattagaggcttatggagcatctagtacattacgtgaaatcttg
acggtaaaatcggatgacgttattggtagagctaaaacttacgaagcaatcgttaaagga
gagactatgccagaaccaggattaccagaatcattcaatgtattaatgcatgaattaaaa
ggtcttggactagacatcagattagaagaataa
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integrated database retrieval system
