Myotis yumanensis (Yuma myotis): 139018658
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Entry
139018658 CDS
T10762
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
myum Myotis yumanensis (Yuma myotis)
Pathway
myum03008
Ribosome biogenesis in eukaryotes
myum03013
Nucleocytoplasmic transport
myum03015
mRNA surveillance pathway
myum05014
Amyotrophic lateral sclerosis
myum05164
Influenza A
myum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
myum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139018658 (NXF1)
03015 mRNA surveillance pathway
139018658 (NXF1)
03008 Ribosome biogenesis in eukaryotes
139018658 (NXF1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
139018658 (NXF1)
05168 Herpes simplex virus 1 infection
139018658 (NXF1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
139018658 (NXF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
myum03019
]
139018658 (NXF1)
03009 Ribosome biogenesis [BR:
myum03009
]
139018658 (NXF1)
Messenger RNA biogenesis [BR:
myum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139018658 (NXF1)
mRNA cycle factors
Stress granule specific factors
139018658 (NXF1)
Ribosome biogenesis [BR:
myum03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
139018658 (NXF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
UBA_8
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
139018658
NCBI-ProteinID:
XP_070283410
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MADGGKSYNEHDDRVSFPQRRKKGRGPFRWKCEGSRRSGRGGAGVRTPRLEDDDRDVAMS
DAQDVPRVRYTPYAARPNRRVDNWHDRDRIHVTVRRDRVPPQRGGAGNSQDGTSKNWFKI
TIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAINYKISDQ
ENRRISIIINSSPPPLTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRLDPDLVAQN
IDVVLNRKSCMAATLRIIEENIPELLSLNLSSNKLYRLDDMSSIVQKAPNLKILNLSANE
LKSERELDKIKGLKLEELWLEGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF
DVEAPTMLPPCKGSYFGTETLKTLVLHFLQQYYAIYDSGNRQRLLDAYHDGACCSLSIPF
TPQNPARSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVD
ISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASTSGLCIVNDELFVRNASPD
EIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQV
FTHLKAKGEIPEVAFMK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagggaagtcctacaacgagcacgatgatcgagttagcttccctcagaga
aggaagaagggccggggtcctttccggtggaagtgtgaggggagccgcaggtctggaaga
gggggtgctggcgtccggacgccccgccttgaggacgatgacagagatgtggccatgagc
gatgcccaagatgttccccgagtacgatacaccccctatgctgcgcgacccaaccggcgg
gttgataattggcatgatcgagaccgcatccatgttactgtgcggagagacagagttcct
ccacagagaggaggggctggcaacagccaggatgggacctcgaagaactggtttaagatt
acaattccttatggcaggaaatatgacaaggcatggctcctaagtatgattcagagcaaa
tgcagtgtccctttcacccccatagagtttcactatgaaaacacacgggcccagtttttt
gttgaggacgccagtactgcctctgcattgaaggctatcaactacaagatttcggatcag
gagaaccgaaggatatccatcatcatcaactcctctcctccgccccttactgtgcagaat
gagctgaagccagagcaagtagagcagctaaagctgatcatgagcaaacgatacgatggc
tctcaacaagcgcttgacctcaagggcctccgtttagacccagatttggtggcccagaac
attgatgttgtcctgaatcgtaaaagctgtatggcggctaccctgcgaatcattgaggag
aatatccctgagctgttgtccttgaacttgagcagtaacaagctgtataggctggatgac
atgtccagcattgtgcagaaagcgcccaacctaaagatcctaaacctctctgcgaatgag
ttgaaatctgagcgggaattggacaagataaaagggttgaagctggaagagctgtggctc
gaaggaaacacgctgtgtgacaccttccgagaccaatcgacctacatcagcgccattcgt
gaacgatttcctaaattactacgtttggacggccatgagttacccccgccaattgccttt
gacgttgaagcccccacgatgttgccaccctgcaaggggagctattttggaacggagacc
ctgaagactctggtcctgcacttcttgcagcagtactatgccatttatgactctggaaac
cgacagcggctcctggacgcctaccatgatggagcctgctgctccctgagcatccctttc
accccccagaaccctgcccgaagcaacttgggcgagtacttcaaggacagcaggaatgtg
aagaagctgaaagacccgaccctgcggttccggctgctgaagcacacacggctcaacgtt
gtggccttcctcaacgagttgcccaagactcagcacgacatcaattccttcgtggtcgac
atcagtgcccaaacgaacacgttactgtgtttttctgtcaatggcgtcttcaaggaagtg
gatggaaagtcccgggattctttgcgagccttcacacggacgttcgtcgctgttccagcc
agcacttccgggctgtgcattgtaaatgacgagttgtttgtgcggaatgccagccctgac
gagatccagagagctttcgccatgcccgcacccacgccctcctccagcccggtgcccacc
ctgtccccagagcagcaggaaatgctgcaggcgttctctacgcagtctggcatgaacctc
gagtggtcccagaagtgcctgcaggacaacaactgggactacaccagatctgcccaagtc
ttcacgcatctcaaggccaagggtgaaatcccggaagtggcgttcatgaagtga
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integrated database retrieval system