KEGG   Myotis yumanensis (Yuma myotis): 139018658
Entry
139018658         CDS       T10762                                 
Symbol
NXF1
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
myum  Myotis yumanensis (Yuma myotis)
Pathway
myum03008  Ribosome biogenesis in eukaryotes
myum03013  Nucleocytoplasmic transport
myum03015  mRNA surveillance pathway
myum05014  Amyotrophic lateral sclerosis
myum05164  Influenza A
myum05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:myum00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    139018658 (NXF1)
   03015 mRNA surveillance pathway
    139018658 (NXF1)
   03008 Ribosome biogenesis in eukaryotes
    139018658 (NXF1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    139018658 (NXF1)
   05168 Herpes simplex virus 1 infection
    139018658 (NXF1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    139018658 (NXF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:myum03019]
    139018658 (NXF1)
   03009 Ribosome biogenesis [BR:myum03009]
    139018658 (NXF1)
Messenger RNA biogenesis [BR:myum03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     139018658 (NXF1)
   mRNA cycle factors
    Stress granule specific factors
     139018658 (NXF1)
Ribosome biogenesis [BR:myum03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    139018658 (NXF1)
SSDB
Motif
Pfam: LRR_NXF1-5 NXF_NTF2 Tap-RNA_bind TAP_C NTF2 UBA_8 LRR_8 LRR_4
Other DBs
NCBI-GeneID: 139018658
NCBI-ProteinID: XP_070283410
LinkDB
Position
Unknown
AA seq 617 aa
MADGGKSYNEHDDRVSFPQRRKKGRGPFRWKCEGSRRSGRGGAGVRTPRLEDDDRDVAMS
DAQDVPRVRYTPYAARPNRRVDNWHDRDRIHVTVRRDRVPPQRGGAGNSQDGTSKNWFKI
TIPYGRKYDKAWLLSMIQSKCSVPFTPIEFHYENTRAQFFVEDASTASALKAINYKISDQ
ENRRISIIINSSPPPLTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRLDPDLVAQN
IDVVLNRKSCMAATLRIIEENIPELLSLNLSSNKLYRLDDMSSIVQKAPNLKILNLSANE
LKSERELDKIKGLKLEELWLEGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIAF
DVEAPTMLPPCKGSYFGTETLKTLVLHFLQQYYAIYDSGNRQRLLDAYHDGACCSLSIPF
TPQNPARSNLGEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVD
ISAQTNTLLCFSVNGVFKEVDGKSRDSLRAFTRTFVAVPASTSGLCIVNDELFVRNASPD
EIQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQV
FTHLKAKGEIPEVAFMK
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggcggacggagggaagtcctacaacgagcacgatgatcgagttagcttccctcagaga
aggaagaagggccggggtcctttccggtggaagtgtgaggggagccgcaggtctggaaga
gggggtgctggcgtccggacgccccgccttgaggacgatgacagagatgtggccatgagc
gatgcccaagatgttccccgagtacgatacaccccctatgctgcgcgacccaaccggcgg
gttgataattggcatgatcgagaccgcatccatgttactgtgcggagagacagagttcct
ccacagagaggaggggctggcaacagccaggatgggacctcgaagaactggtttaagatt
acaattccttatggcaggaaatatgacaaggcatggctcctaagtatgattcagagcaaa
tgcagtgtccctttcacccccatagagtttcactatgaaaacacacgggcccagtttttt
gttgaggacgccagtactgcctctgcattgaaggctatcaactacaagatttcggatcag
gagaaccgaaggatatccatcatcatcaactcctctcctccgccccttactgtgcagaat
gagctgaagccagagcaagtagagcagctaaagctgatcatgagcaaacgatacgatggc
tctcaacaagcgcttgacctcaagggcctccgtttagacccagatttggtggcccagaac
attgatgttgtcctgaatcgtaaaagctgtatggcggctaccctgcgaatcattgaggag
aatatccctgagctgttgtccttgaacttgagcagtaacaagctgtataggctggatgac
atgtccagcattgtgcagaaagcgcccaacctaaagatcctaaacctctctgcgaatgag
ttgaaatctgagcgggaattggacaagataaaagggttgaagctggaagagctgtggctc
gaaggaaacacgctgtgtgacaccttccgagaccaatcgacctacatcagcgccattcgt
gaacgatttcctaaattactacgtttggacggccatgagttacccccgccaattgccttt
gacgttgaagcccccacgatgttgccaccctgcaaggggagctattttggaacggagacc
ctgaagactctggtcctgcacttcttgcagcagtactatgccatttatgactctggaaac
cgacagcggctcctggacgcctaccatgatggagcctgctgctccctgagcatccctttc
accccccagaaccctgcccgaagcaacttgggcgagtacttcaaggacagcaggaatgtg
aagaagctgaaagacccgaccctgcggttccggctgctgaagcacacacggctcaacgtt
gtggccttcctcaacgagttgcccaagactcagcacgacatcaattccttcgtggtcgac
atcagtgcccaaacgaacacgttactgtgtttttctgtcaatggcgtcttcaaggaagtg
gatggaaagtcccgggattctttgcgagccttcacacggacgttcgtcgctgttccagcc
agcacttccgggctgtgcattgtaaatgacgagttgtttgtgcggaatgccagccctgac
gagatccagagagctttcgccatgcccgcacccacgccctcctccagcccggtgcccacc
ctgtccccagagcagcaggaaatgctgcaggcgttctctacgcagtctggcatgaacctc
gagtggtcccagaagtgcctgcaggacaacaactgggactacaccagatctgcccaagtc
ttcacgcatctcaaggccaagggtgaaatcccggaagtggcgttcatgaagtga

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