Maylandia zebra (zebra mbuna): 101464383
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Entry
101464383 CDS
T02814
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
101464383
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101464383
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101464383
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101464383
NCBI-ProteinID:
XP_014265038
LinkDB
All DBs
Position
LG7:complement(14346..39388)
Genome browser
AA seq
1345 aa
AA seq
DB search
MFNWVVKVVPQPPDAGTDDAAKTPDAPTKNKAAAVKTAALKDADEVSEEGQAQTGVLGWF
SNGFVSTLPQPAGSPRLSRANSEAKSGEDGDRSGVITWVTQGLTKVLPQPDDKYRETEKD
SKDEEHTEVYDIATMPDFDPLPHIPVVEMVSDDEDTESLAPHFPPNVVTWIKQIVPQPVI
LPPGAVPVEPSTKSSCTSLDKMLHVVCSTVLSPPPESLSGISLDTESKASGVVNWFVSGL
GLKMPQPVSPSKDEATTVPELIQKASAKLKPDMVLEDVESDNEGQHKCADAPKAQAPSAS
LVPPSPAPQQQQEVTQPSQSLSVESQKCSAAPPEPQPSESATKVSLEDAETQTGRWTPFI
ENIKKEAEGVALATMEERLLQERVEMTRMAEEVARQTAEMAVRQMASEGQSIKLSLGSQE
LLEEPEAELPVPLEEESEVEISKAPEKNQEEQKAETEEPTVNEPEPQEEASTSPPPSSEP
VEISEPKPEQALEAETKSPEAPPEAEPITEQPQKNEDVGQTANADKAPEKEEEATGDDCG
ESSNISLRPAVNVEDVDSDHERAGGAKGGGGGGGEEQIPQILTPQDPKLTTLTVPVTPSG
RQSKGDKDSGRNRRSVWTKIRRLHSESEDDDEEASIPVRAWPSQSSLHSTDDVLKERPAS
SASQTSTVVNERLQELVRMFKERTEKAKEKLIDPDSSDEDSIITSPPQPPAPQPAPGAQP
PDENETQAGPSGGGGVESGTEEEQPGRCCKVKTPRWIRACVRFRFPASIDPFTNLMYVLW
MFLVSLAWNWNVWFIPVRWAFPYQTPDNIHYWLLTDYLCDLIYILDIAVFQPRLQFVRGG
DIVCDQKEMRKNYMKTKRFKFDVASLVPLELFYFKTGINPLLRLPRLLKIKSFFEFNDRL
EAILTKAYIYRVIRTTTYLLYCLHFNACLYYWISDFIGLGLTEWVYDGEGNSYIRCYYFA
VKTLITIGGLPDPTTLSEIIFQLINYFIGVFAFSIMIGQMRDVVGAATASQTYYRSCMDS
TIKYMSSYRIPRDVQNRVKTWYNYTWQSQGMLDEQELLNQLPDKMRLDIAIDVSYSIVSK
VPLFQGCDRQMIFDMLKSLRSVVYLPGDYVCKKGEVGREMYIIKAGEVQVVGGPDGKTVF
VTLRAGSVFGEISLLAVGGGNRRTANVIAHGFANLFILDKKDLNEILVHYPESKKLLRKK
ARKMLNKGKKPEPKEEAKEPPLVPAAPVRAETPKLLKAALEMTERSSGLKGALAKVKEKT
NKSSISLQPSISSPLPPPSPASSLEPDREVDTPSPMSAGSPTFRSASRCRYSAMPQSPSE
CHSDTVTKEPISDDEGNGKRKEKKS
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggttccccagcctcctgatgctgggacagacgatgct
gccaagacccctgatgctccaaccaaaaataaagcggctgcagtgaagacagctgcactg
aaagatgcagacgaggtttcagaggaaggccaagcgcagactggagtattgggctggttt
tctaatgggttcgtcagcacgctcccacagcctgcgggcagcccccgactcagcagagcc
aactctgaagccaagtccggagaagatggagacaggtctggagtgatcacctgggtcact
cagggtctgaccaaagtgctgcctcagcctgacgacaagtacagagagactgagaaggac
tcgaaggacgaggagcacacggaggtgtacgacatagccacgatgccagatttcgatcca
cttccccacatccctgtggtggagatggtgtcagacgacgaggacacagagagtttggcc
cctcactttcctcccaatgtggtgacctggataaagcagatagttcctcagccggtcata
ctgccccctggtgctgtgcccgtggaaccgtcaaccaagtcctcctgcacctctctggat
aaaatgcttcatgttgtctgctccacagttctgtctccgccgcctgaatcgctcagtgga
atctcactggatactgaaagcaaggcctctggtgtggtgaactggtttgtgtcagggctg
ggtctgaagatgccgcagcctgtttctccatccaaggatgaagctactacggtacctgaa
ctcattcagaaagcatcagccaaactcaaaccagacatggtgctggaagacgtggagtcg
gacaacgagggccagcacaaatgtgcagatgctcccaaagctcaagctccgtccgcatcc
ctggttccaccatcacctgcaccccagcagcaacaggaagtgacacaaccctcacagtcg
ctttcagtggagtcacagaaatgcagcgccgcccctccggagccacaaccgtcagagagt
gccacaaaagtatctctggaagatgcagagacccagacaggccgctggacgccgtttatt
gaaaacatcaagaaggaggccgaaggggtggcgttggctaccatggaggagcgtctgctt
caggagagggtggagatgacccggatggctgaagaggttgccaggcagacagctgagatg
gccgttagacagatggccagtgagggacagtccatcaagctctcgctggggagtcaagag
ctcctggaggagcctgaagccgagctgccggtgccgctagaagaggagagcgaggtggag
atcagcaaagccccagagaagaaccaggaggagcagaaagctgagactgaggagcccacc
gtcaacgagccagagccgcaggaagaagcctcgacctcaccgcctccgagcagtgagcca
gtggagatttctgagcctaagccagaacaagcactagaagcagaaaccaagagcccagaa
gctcctccagaagctgagcccatcactgagcagccgcagaaaaacgaagacgtcggtcaa
actgctaacgctgacaaggctcctgaaaaagaggaggaagctactggggatgactgcggt
gagagctccaacatcagccttcgcccagctgttaatgtagaggatgttgactctgatcat
gagagggcaggaggagcaaaaggaggaggaggaggaggaggggaagaacaaatcccccaa
atcctcaccccacaggacccaaagcttacaaccctcactgttcctgtgaccccttcaggt
cgtcaaagtaaaggagataaagatagtggaaggaatcgcaggagcgtctggacaaagatc
aggaggcttcattctgaaagcgaggatgacgatgaagaggcaagcatccccgtgagagcc
tggcccagccagtccagcctgcacagcacagatgacgttctgaaagaacgtccagcatct
tctgccagtcagaccagcacggtggtcaacgagaggcttcaggagctcgtcaggatgttt
aaggagagaacggagaaggccaaggagaaactcatcgacccagacagctcggatgaagac
agcattatcacctctcctcctcagcctccagctcctcagcctgctcctggagctcagccg
ccagatgagaacgagacgcaagcaggtccgtccggaggaggaggagtagagagcggaacg
gaggaggagcagcctggccgttgctgcaaggtgaaaacacctcggtggatacgagcctgt
gtgcgattccgcttccccgccagcatcgaccctttcaccaacctgatgtacgtgctctgg
atgtttttggtgtctctggcctggaactggaacgtgtggttcatcccggtgcgctgggcc
ttcccctaccaaaccccggacaacattcactactggctgttaaccgactacctgtgtgac
ctcatttacatcctggacatcgctgtttttcagccgcgcctgcagtttgtgcgtggaggg
gacatagtgtgtgaccaaaaggagatgagaaagaattacatgaaaaccaaacgttttaag
tttgatgtggccagccttgttccccttgagctcttctattttaaaactggcatcaaccct
ctgctccgcttaccacggctgctgaagatcaagtccttctttgagttcaatgatcgtcta
gaggccatcttgaccaaagcctatatctacagggtgattcgtaccaccacctatcttctt
tactgtctgcactttaatgcctgtctctactactggatctctgacttcataggactggga
ctgactgagtgggtgtacgatggcgagggtaacagttacattcgctgttactacttcgca
gtgaagaccctgattaccattgggggtctgccagatcccaccaccctgtctgagatcatc
ttccaactcatcaactactttatcggagtctttgctttctcaatcatgattggacagatg
cgcgatgttgtcggtgcagctacagcaagtcaaacctactaccgcagctgcatggacagc
actattaaatacatgtcctcctaccgcatcccgagagacgtccagaaccgggtcaaaacc
tggtataactatacctggcaatcacaaggcatgctggacgagcaggagctgctgaatcag
ctgccagataaaatgcgtctggacatagcgatagatgtcagctactccattgtgagcaaa
gtccctctttttcagggttgtgacagacagatgattttcgacatgctaaaaagcctgcgc
tctgtcgtctacctcccgggggattatgtctgcaaaaagggcgaggtgggtcgggagatg
tatatcataaaggctggagaggtgcaggtggttggaggcccagatgggaagactgtattt
gtcactcttagagcaggatcagtctttggagaaatcagcttgcttgcagtcggcggtggt
aacaggcgcacagccaatgtgattgctcatggctttgccaatctattcatcctggacaaa
aaagacctgaatgagatcctggtccactatccagagtccaagaaactgctgcgcaagaaa
gccaggaagatgcttaacaaaggaaagaaacctgaacctaaagaagaggctaaggaaccc
cctctggtaccagcagctcctgtcagggcagagacgcccaaactgttgaaagcagctctt
gagatgacggagagatcgtcgggacttaaaggcgctttggcaaaagtcaaagagaagacg
aacaagtccagcatctccttacagccgtccatctcctcccccctcccacctccatccccc
gcctccagcttggaacctgacagggaagtggacacgccatcacccatgtctgccggctct
ccgacatttcgctctgcttcccggtgtcggtactctgcgatgcctcagtcaccctctgag
tgccacagcgacacagtcacgaaggagccaatcagtgatgatgaaggaaacgggaagagg
aaagaaaaaaagtcgtga
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