Maylandia zebra (zebra mbuna): 101467992
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Entry
101467992 CDS
T02814
Symbol
trpc4
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mze04040
]
101467992 (trpc4)
Ion channels [BR:
mze04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101467992 (trpc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
101467992
NCBI-ProteinID:
XP_004550159
UniProt:
A0A3P9DF06
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Position
LG10:15931748..15965480
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AA seq
968 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYKDDISLLEEEGANDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFATCVFIGLLFPVFALCYLIAPKSRYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVITEQNRQDRQGPPPTAVEWMILPWVLGFIWAE
IKQMWDGGFQDYVHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYDTKASDEKGKCKGIRCVHQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGANMFGAYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGTLP
APFNIIPSPKSFWYLMCWIKKQVWRTSSKRPDTIGTLGRRAAENLRINHQYQEVLRNLVK
RYVAAMIRDAKTEEGLTEDNFKELKQDISSFRYEVMGMMKTGKSALNVAKASGSSVESSL
AYPNSSLKVSACPQSTQMKSKFNRFKIATSILKLGSSTAAPRPPEASNGLPNGFMSLVSD
ESSGEMSSQRRSNSKDVSDFGLFQKHQRGNKEASSSAAESSREMYSLSEEAGECGDSDLE
EHIAGEKSERKLLETKKKEEVEEIKEESNSKKCLDQCEERETEERDKDLTCTDSVADECM
SGSYKDDA
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactaccggcggactgacagctcctcataccgggaccgaatcccgttg
agaattgtgcgggccgagtcggagctgtcacctttagagaaagcctaccttggagccgtc
gagaaaggggactatgcgagtgtcaagcaagcgcttgaggaggctgagatctacttcaag
atcaacatcaattgcatcgaccctctcggccgcacagctctgctgatcgccattgagaac
gagaacctggaaatcatcgaactcttgctgagcttcaacgtgtatgtcggtgacgccctg
ctgcatgcaattcgcaaggaagtggtgggagctgtggagctgctgctaaatcacaagaag
ccgagtggtggcatgcaggttccaccgatcctactggacaagcagttctctgacttcacc
cctgacatcactcctatcattcttgctgcacacaccaacaactatgaaattatcaagctt
ctggtgcagaaaggtgtgtctatgccacagccacatgaggtgcgctgcaactgtgtggag
tgtgtgtctagttcggatgtggacagcctgcggcactcgcgctcacgactcaacatctac
aaagcactgtcgagtccctcactaattgcgctctccagcgaagaccccttcctaaccgca
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaatgagtttaaatctgag
tatgaagagctgtcccagcagtgtaagcagtttgcaaaagacctcctggaccaaacaagg
agctccagagagctggagatgatcctcaactataaagatgatatcagcttattggaagag
gagggcgctaatgatctggcaagactcaagctagctatcaaataccaccaaaaagagttt
gtagctcagcccaactgtcagcagcttttggcatcacgctggtatgatgagttccctggc
tggaggcggcgtcactgggcgggaaagtttgccacctgtgtcttcataggtctcctcttc
cctgtgtttgctctctgctacctcatcgctcccaagagtcgctatggcctcttcatccgc
aagcccttcatcaagttcatctgccacacggcgtcctacctgacctttctgttcctgctg
ctcctcgcctcccagcacattgttatcacggagcagaacaggcaggacaggcagggccct
ccacccaccgctgtggagtggatgatcctgccctgggtactgggattcatctgggcagag
atcaagcaaatgtgggatggtggttttcaagactatgttcatgactggtggaacctgatg
gactttgtcatgaactctctgtacttggccactatctccctgaagattgtagcctatact
aagtacagcggaagtaaacccagaaaccagtgggaaatgtggcacccgacactagttgct
gaagcagtgtttgccattgcaaacattttcagttccctgcgcctcatttcactgttcacg
gccaactctcacctggggccactgcagatttctctggggcgaatgttgctcgacatcctg
aagttcctcttcatctactgcctggttctgctcgccttcgctaatggcctgaaccagctg
tacttttactatgacactaaggcttcagatgagaaaggaaagtgtaagggcatccgatgt
gtgcatcagaataacgctttctccacattatttgagaccctgcagtctcttttctggtct
atctttggtttgatcagcctgtatgtgaccaatgtggatgctgaccaccagttcactgaa
tttgtcggtgccaacatgttcggggcctacaacatcatttcattggtggtcctcctcaac
atgctcatagctatgatgaacaactcctaccagcacattgctgaccatgcagacattgag
tggaaatttgcaaggacaaaactgtggatgagttattttgaagaagggggtactctgcca
gctcctttcaacatcatccccagccccaaatcattctggtacctcatgtgctggatcaag
aagcaggtgtggaggacaagctccaagcgccctgacaccattggtacccttgggaggcga
gctgcagagaacctgaggataaaccatcagtaccaggaggtactgaggaacctggtgaaa
cgttatgtggctgccatgattcgagatgccaagacagaggaaggcttgactgaagacaac
ttcaaggagctgaaacaagatatctccagtttccgttatgaggtgatgggaatgatgaag
acaggaaagtcagctttaaatgtggcaaaggccagtggcagctcagtggaatccagcctt
gcgtaccctaattcctcactcaaggtctctgcttgcccacagagcacccagatgaaaagc
aaatttaatcgattcaaaatcgctacatccatcctcaagctgggcagttcaacagctgca
cccaggccacctgaagcctccaatggtctacctaatggattcatgtccctggtctctgat
gagagctctggtgaaatgtcaagccagaggagaagcaactccaaagatgtatctgacttt
ggtttgtttcagaaacaccaaaggggcaacaaagaagcctcatcaagcgcagcagaaagc
tcgagggagatgtactctttgtcagaagaagcaggggagtgtggggactcagacttagag
gaacatatcgctggagaaaagagtgagaggaaactcctggaaacaaaaaagaaggaagaa
gtcgaggaaattaaggaggagtcgaacagcaaaaaatgcttggaccagtgtgaagaaaga
gaaaccgaggaaagagacaaggatttaacctgtactgactcagtagctgatgaatgtatg
tctggctcatacaaagacgatgcctaa
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