Maylandia zebra (zebra mbuna): 101475082
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Entry
101475082 CDS
T02814
Symbol
whrn
Name
(RefSeq) whirlin isoform X1
KO
K21879
whirlin
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mze03037
]
101475082 (whrn)
Cilium and associated proteins [BR:
mze03037
]
Primary cilia and associated proteins
USH complex and associated proteins
101475082 (whrn)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
USH1C_N
DUF6288
HHD_RTEL1
PAH_ZNF598
DUF1722
Motif
Other DBs
NCBI-GeneID:
101475082
NCBI-ProteinID:
XP_012772923
UniProt:
A0A3P9CDI6
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Position
LG7:33342420..33560869
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AA seq
968 aa
AA seq
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MSSTDLERMSLSSSVNSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVASNGHAEPS
PGEFLSASPTPPGHFSPNNPPEFQVALRGSPDSFSTSSDGTAPLVPLLGRNFIHEPPGEL
RQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQIMKVNDKVFDK
VTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPEHRSATL
RRTDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQGSAAECG
GLKVGDQILEVNGRSFLSIPHDEAVRVLKSSRHLMMTVKDVGRLPHTRTVVGETKWIASS
QIAESSANSSVASFSVDQGASASGKSGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTE
AERQTMVYYVEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVAPQDLERFDGLVL
RREIQALKARQGAAGASALQPDSLSMVSYPDTLTSSSASFMTNTTLSSARNDSVVESNEE
DPPESLNMLLTDISLDDVQSATAESPPSFKPPPPPGVQRGPSRRDPLNKCPSSESSHSGL
YFTATASKNHGNEPGHAPASPSLHHKRERQRDPSQEYAAIRKREPSALAKKQKTTSAQLS
TVTQHNIGPFPRVQSPSRGTKPAAPSPSPPPPPPLPAPPPPPSLSLKPASKTKSSPTSSP
GSKQQFVTVEVHRPNAEPDVNEVRPLPQARGGTLSQLSDSGQTLSEDSGVDIAESGHVRK
ESSSHSSRTHLPRDTQEGGGGDNPSKPPGLLEPTATLVRVAKTASTLGIAIEGGANTRQP
LPRIVTIQRGGSAHNCGQLKVGQIILEVNGVSLRGREHRDAARLIAEAFKTKDRDYVDFL
VTEFNVAL
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgacctggagcgcatgtcgctcagctcttcggtaaactctgtggcgtcc
agcgcacggacgctgtcagctaacgtgaggaagctgcacaacgcgctcaatctcctgctc
aacgatttcgaaagggagcagttcatccactgcctgaatgtctaccactccaaacgcaac
gtgtacgacctggtgcagaccctcaatgtcatcctcaacgctcccagcaaacggcaactt
ctgcccatgcttcggctggtgatcccccgctccgatcagctccttttcgagcagtacacc
tcggagggcctttacttaaagtcggatttagttgcaagcaacggacacgccgagccgtcc
ccgggcgaattcctcagcgctagcccgacgcccccggggcatttctctccaaacaacccc
cccgagtttcaagtggcgctgcggggctctccggacagcttcagcaccagtagcgacggg
acagctcccctggtacctcttctcgggaggaactttatccacgagccgcccggtgagctg
cgccaggtcaccatgaagcggcacaagagcaacgagggcctgggcttcagtattcgcggc
ggttcggagcacggagtcgggatctacgtgtccctggtggagcccgggagcttggcggag
aaagagggtctccgggtcggtgaccagatcatgaaagtcaacgacaaagtcttcgataaa
gtcacccatgctgaagcagtgaaggtgctcaagggaagtaaaaagctttgcctctcagtg
cgttcagtcggtcgcattccaggcggctatgtcaccaaccacgtttatacctgggttgac
cctcagggccgaagcgtgtctcctcctcctgacctgcctgagcatcgcagcgccactctg
agaagaactgacagtcagcgccgaagcaacatgcagctactgcaggaaggggatgagaag
aaggtcaacctggttttagatgatggccggtctctgggtctgatgatccgagggggagcg
gaatacgctttgggtatttacatcactggagtggaccaagggtcagcagcagagtgtgga
ggactgaaggttggtgaccagatcttggaggtgaatggccgcagtttcctgagcatcccg
cacgatgaggccgtcagagtcctgaagtcatcacgccatctgatgatgacagtgaaagac
gtaggccgcctgccgcacaccaggacggtggtgggtgagaccaagtggatcgccagctca
cagattgcagagagctctgccaatagcagcgtggcaagcttttctgtggatcaaggagct
tctgcatcaggaaagtctggcttttataagggtgtggcaggctcacaggtaaccctttcc
agtctagtgaatcaatcccgtgccatgctggaggagcaggcacgccacctgctgacagag
gcggagcgacagaccatggtctactacgtggaggagtaccgggacggacacataggagtg
gagcagctggtcatggcgctgtttgagctgctgaacacgcacgcaaagttctccttgctg
tctgaagtacgaggcctggttgcgccacaggacctggagcgttttgatgggctggtcctt
cgacgggaaattcaggcccttaaagctcgacagggggcagctggcgcctcagccctgcag
ccagactccctgtccatggtgtcatatccagacactctgacatcatcttcagccagcttc
atgaccaacaccaccctcagctctgcacggaatgacagcgttgtggagagtaatgaggag
gatcccccagagagcctgaacatgctgctgaccgacatctctctggatgatgttcagtcc
gccacagccgagtcccctccctccttcaagcctccgcccccaccaggggtgcagaggggc
ccaagtagaagagatccgctcaacaagtgcccctcttccgaatcctcacactcaggcttg
tactttacagccacagcctctaagaaccacggcaacgagccaggacacgctcctgcctca
ccctctttacaccacaaacgagaacgccagagggacccgtctcaagaatacgcagctatc
agaaagagagagccctctgcattggccaagaaacagaaaacaacatccgctcagttgtcc
acagtcactcagcacaacattggccctttccccagggtgcagtcgcccagcagaggcact
aaacccgctgccccgtccccttcacctccgcctcctcctccactccctgcccctcctccg
cccccttctctgtcccttaagccagcgtccaagaccaaatcctcccccacctcctctcct
gggtctaaacagcagtttgttacagtggaggttcacaggcccaacgcagaacctgatgtc
aatgaggtgcggccacttccccaagctcgaggtggcaccctgtctcagctgtcagacagt
ggccaaaccctcagtgaggacagcggggtggacatagctgagtcaggacacgtcaggaaa
gaaagtagctcccattcctcacgcacacacctcccccgagacacccaggagggaggcggg
ggggacaacccctccaaaccgccagggcttttggagcctaccgctacactagtgagggtg
gcaaagactgccagcaccctgggtattgccattgaaggtggagccaacactcgccagccg
ctgccacgaattgtgacaatacagaggggtggttcagctcataactgcggccagctgaag
gtgggacagattatactggaggtaaacggggtttccctgaggggccgcgagcacagggac
gcagcgcgcctcatcgccgaggccttcaagaccaaagacagagactacgtagacttcttg
gtgactgagttcaatgtggcactatag
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