KEGG   Maylandia zebra (zebra mbuna): 101475082
Entry
101475082         CDS       T02814                                 
Symbol
whrn
Name
(RefSeq) whirlin isoform X1
  KO
K21879  whirlin
Organism
mze  Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:mze00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mze03037]
    101475082 (whrn)
Cilium and associated proteins [BR:mze03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   101475082 (whrn)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 USH1C_N DUF6288 HHD_RTEL1 PAH_ZNF598 DUF1722
Other DBs
NCBI-GeneID: 101475082
NCBI-ProteinID: XP_012772923
UniProt: A0A3P9CDI6
LinkDB
Position
LG7:33342420..33560869
AA seq 968 aa
MSSTDLERMSLSSSVNSVASSARTLSANVRKLHNALNLLLNDFEREQFIHCLNVYHSKRN
VYDLVQTLNVILNAPSKRQLLPMLRLVIPRSDQLLFEQYTSEGLYLKSDLVASNGHAEPS
PGEFLSASPTPPGHFSPNNPPEFQVALRGSPDSFSTSSDGTAPLVPLLGRNFIHEPPGEL
RQVTMKRHKSNEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKEGLRVGDQIMKVNDKVFDK
VTHAEAVKVLKGSKKLCLSVRSVGRIPGGYVTNHVYTWVDPQGRSVSPPPDLPEHRSATL
RRTDSQRRSNMQLLQEGDEKKVNLVLDDGRSLGLMIRGGAEYALGIYITGVDQGSAAECG
GLKVGDQILEVNGRSFLSIPHDEAVRVLKSSRHLMMTVKDVGRLPHTRTVVGETKWIASS
QIAESSANSSVASFSVDQGASASGKSGFYKGVAGSQVTLSSLVNQSRAMLEEQARHLLTE
AERQTMVYYVEEYRDGHIGVEQLVMALFELLNTHAKFSLLSEVRGLVAPQDLERFDGLVL
RREIQALKARQGAAGASALQPDSLSMVSYPDTLTSSSASFMTNTTLSSARNDSVVESNEE
DPPESLNMLLTDISLDDVQSATAESPPSFKPPPPPGVQRGPSRRDPLNKCPSSESSHSGL
YFTATASKNHGNEPGHAPASPSLHHKRERQRDPSQEYAAIRKREPSALAKKQKTTSAQLS
TVTQHNIGPFPRVQSPSRGTKPAAPSPSPPPPPPLPAPPPPPSLSLKPASKTKSSPTSSP
GSKQQFVTVEVHRPNAEPDVNEVRPLPQARGGTLSQLSDSGQTLSEDSGVDIAESGHVRK
ESSSHSSRTHLPRDTQEGGGGDNPSKPPGLLEPTATLVRVAKTASTLGIAIEGGANTRQP
LPRIVTIQRGGSAHNCGQLKVGQIILEVNGVSLRGREHRDAARLIAEAFKTKDRDYVDFL
VTEFNVAL
NT seq 2907 nt   +upstreamnt  +downstreamnt
atgagcagcaccgacctggagcgcatgtcgctcagctcttcggtaaactctgtggcgtcc
agcgcacggacgctgtcagctaacgtgaggaagctgcacaacgcgctcaatctcctgctc
aacgatttcgaaagggagcagttcatccactgcctgaatgtctaccactccaaacgcaac
gtgtacgacctggtgcagaccctcaatgtcatcctcaacgctcccagcaaacggcaactt
ctgcccatgcttcggctggtgatcccccgctccgatcagctccttttcgagcagtacacc
tcggagggcctttacttaaagtcggatttagttgcaagcaacggacacgccgagccgtcc
ccgggcgaattcctcagcgctagcccgacgcccccggggcatttctctccaaacaacccc
cccgagtttcaagtggcgctgcggggctctccggacagcttcagcaccagtagcgacggg
acagctcccctggtacctcttctcgggaggaactttatccacgagccgcccggtgagctg
cgccaggtcaccatgaagcggcacaagagcaacgagggcctgggcttcagtattcgcggc
ggttcggagcacggagtcgggatctacgtgtccctggtggagcccgggagcttggcggag
aaagagggtctccgggtcggtgaccagatcatgaaagtcaacgacaaagtcttcgataaa
gtcacccatgctgaagcagtgaaggtgctcaagggaagtaaaaagctttgcctctcagtg
cgttcagtcggtcgcattccaggcggctatgtcaccaaccacgtttatacctgggttgac
cctcagggccgaagcgtgtctcctcctcctgacctgcctgagcatcgcagcgccactctg
agaagaactgacagtcagcgccgaagcaacatgcagctactgcaggaaggggatgagaag
aaggtcaacctggttttagatgatggccggtctctgggtctgatgatccgagggggagcg
gaatacgctttgggtatttacatcactggagtggaccaagggtcagcagcagagtgtgga
ggactgaaggttggtgaccagatcttggaggtgaatggccgcagtttcctgagcatcccg
cacgatgaggccgtcagagtcctgaagtcatcacgccatctgatgatgacagtgaaagac
gtaggccgcctgccgcacaccaggacggtggtgggtgagaccaagtggatcgccagctca
cagattgcagagagctctgccaatagcagcgtggcaagcttttctgtggatcaaggagct
tctgcatcaggaaagtctggcttttataagggtgtggcaggctcacaggtaaccctttcc
agtctagtgaatcaatcccgtgccatgctggaggagcaggcacgccacctgctgacagag
gcggagcgacagaccatggtctactacgtggaggagtaccgggacggacacataggagtg
gagcagctggtcatggcgctgtttgagctgctgaacacgcacgcaaagttctccttgctg
tctgaagtacgaggcctggttgcgccacaggacctggagcgttttgatgggctggtcctt
cgacgggaaattcaggcccttaaagctcgacagggggcagctggcgcctcagccctgcag
ccagactccctgtccatggtgtcatatccagacactctgacatcatcttcagccagcttc
atgaccaacaccaccctcagctctgcacggaatgacagcgttgtggagagtaatgaggag
gatcccccagagagcctgaacatgctgctgaccgacatctctctggatgatgttcagtcc
gccacagccgagtcccctccctccttcaagcctccgcccccaccaggggtgcagaggggc
ccaagtagaagagatccgctcaacaagtgcccctcttccgaatcctcacactcaggcttg
tactttacagccacagcctctaagaaccacggcaacgagccaggacacgctcctgcctca
ccctctttacaccacaaacgagaacgccagagggacccgtctcaagaatacgcagctatc
agaaagagagagccctctgcattggccaagaaacagaaaacaacatccgctcagttgtcc
acagtcactcagcacaacattggccctttccccagggtgcagtcgcccagcagaggcact
aaacccgctgccccgtccccttcacctccgcctcctcctccactccctgcccctcctccg
cccccttctctgtcccttaagccagcgtccaagaccaaatcctcccccacctcctctcct
gggtctaaacagcagtttgttacagtggaggttcacaggcccaacgcagaacctgatgtc
aatgaggtgcggccacttccccaagctcgaggtggcaccctgtctcagctgtcagacagt
ggccaaaccctcagtgaggacagcggggtggacatagctgagtcaggacacgtcaggaaa
gaaagtagctcccattcctcacgcacacacctcccccgagacacccaggagggaggcggg
ggggacaacccctccaaaccgccagggcttttggagcctaccgctacactagtgagggtg
gcaaagactgccagcaccctgggtattgccattgaaggtggagccaacactcgccagccg
ctgccacgaattgtgacaatacagaggggtggttcagctcataactgcggccagctgaag
gtgggacagattatactggaggtaaacggggtttccctgaggggccgcgagcacagggac
gcagcgcgcctcatcgccgaggccttcaagaccaaagacagagactacgtagacttcttg
gtgactgagttcaatgtggcactatag

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