Maylandia zebra (zebra mbuna): 101480347 Help Entry 101480347         CDS       T02814                                  Name (RefSeq) protocadherin-15 isoform X2   KO K16500   protocadherin-15 Organism mze  Maylandia zebra (zebra mbuna) Brite KEGG Orthology (KO) [BR:mze00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:mze03037]     101480347    04515 Cell adhesion molecules [BR:mze04515]     101480347 Cilium and associated proteins [BR:mze03037]  Primary cilia and associated proteins   USH complex and associated proteins    101480347 Cell adhesion molecules [BR:mze04515]  Cadherins   Protocadherins    101480347 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin PCDH15_12th ECD Cadherin_FAT4_N Cadherin_CELSR2_9th Fibulin_C RET_CLD1 Cadherin_2 Motif Other DBs NCBI-GeneID:  101480347 NCBI-ProteinID:  XP_004567573 LinkDB All DBs Position LG8:complement(12031696..12268709) Genome browser AA seq 1810 aa AA seqDB search MVVKMVRMRLTGPLSWGWCKWSSVTGMGVLYLLMLSTCLGQDTEDWQYEECKLSRSGPPA TIVAIDEESPNGTLLVDNMHINGVAEGPDRTISLSLRDNNDRWVILDPSKQALYLNSTGR VLDRDPPSYIHSIVVQVQCTNELIGTVILHEVRIVVRDRNDNAPRFQQPRYYVAVNELTP VGTTIFSGFSGNNGATDIDDGPNGQIEYTIQYNPRDPTANRTFDIPLTLFGSVVLRERLN YEDITRYLVIIQANDRAPNPSDRRTATTTLTVDVLDGDDLGPMFLPCTLVGNTRDCSPIT YKANVLELTEPSKVNPLNVTPPIQAVDQDRNIQPPSDRPGILYSILIGKPESYVEYFRLN RTTAELLLLKPIDREHYHRFDLVIKAEQDNGHPLPAFASLQIEVLDENNQAPYFLQPSYH GYISEASPVGTTIATSASLSVPLAIIALDNDVEETRDPQLQFSLDSYSHVFSVSATGIKR YLTLVQPVDRETQDSYTFTLVASDGVQESTAVTVAITVLDANDNTPTFPNVSYNVNLFID MMPGEAVLQLSAFDSDAGQNGLITYRILAGHQGHFVIGNSSGIITVAPGVQLSVGQSYAL TVEAMDNGPEPHRRSSITTVYIEVLPPNNQSPPRFPRQQYNLEISEAMRTGATLLNLQAV DRERDPITYKIQSGDIQGHFALQQNSGYLVLDKPLDRETLDYYTLVVTASDGHPEGTSTA TVSIVVTDVNDNDPLFDTSLPVNLTVIEEQKHAYVGQVKATDPDLGANGQVHYRLVNHQG LFSINATGTITTAVPLDREVKGHYYLTVEAWDGAENPRRSRLTLRVTVLDIDDNSPIFTQ QTYNVNLPENSPKGTVILQLKATDADLNSNLTYRIRTEGSDQDITQLFHIDSRTGELSVL KVLDFEALSESEPTYTFTVEALDTKGNMPPGLASVTVRIMDMNDFSPVFSQSVYRGMVAP NAVKGTIVTTVMANDSDPAGTPAGLVRYKVDQEAYPYSASIFGVEEQTGRVVTRVNLNEE PNMKFSLVVVAYDHGEPVMKNTTLVEITVLQPSVIPVFTREEYRFLPVSEEAAVGTPVGV ILASAVNQTIVYSIIEGNEGGVFALNETTGVIYTAKPLDYETNASYVLKVEADSMRVVSS NLRAPSKTNTAKVVIDVQDENDHAPEFTRPLYIGGVAEDSKTFTSVLQVQALDKDTGNYS SIIYRLIVPPPASKDTKDTKDGFIIEPYSGVVKTAIMYRNMRRSYFKFEVVATDNYGQGH SSKADIVVSVVNQLDMQVVVSNVPPTYVEKNKEKLLSILERYVQEQIPGAKVVVETIGPH RHGDGMEQEDYTKSDLMIYAIDPLTNRAVSRQELYKFLDGKLLDINKEFQPFLPPGGRIL EIRTPEVVTSVKKAVQTVGYTEGALLALAVIIIICCVPAILIVIITYKQFKERQAECAKT ARIQMALPTGKPGGGTANNLYEELGDNAMRGYGQHETQQLLRPSLLRPEELSMESGIDPG HDYYTQDYYNYDHGYDLPQYGSRRKLISPSGLYDEYGEVVVDDDGSYYYSPQESDGEGSR KRRVKLVFDREYETSSTGEESAPETQRGRLSSTHNSQVNVNGSIYVAQNGSIIRTRRSVN TTGPTQTTTTNNNLKLPSPIFSSRLAKHFKKLDKMAATLEERVPLNSFRTTLDGGCNTLR TFQSSGTVATTTTTSSFSNPDSKTLNVFNTRQSSVSSGSTSTSNAGPESVASKSNLLKVA QEGTEQSQSTAERNESEEGERESKVDGSNDDTDGLVIREPLECPSDRTQSDEEELWMGPW NSLHIPMTKL NT seq 5433 nt NT seq  +upstreamnt  +downstreamnt atggtggtgaagatggttagaatgcgcttaacggggccgctgtcatggggctggtgcaaa tggtcaagtgtaacaggaatgggagtcctgtatctgctgatgctatcaacctgccttggc caagacacggaagactggcaatatgaggaatgcaaactttcccgctcgggtcctcctgct accatagttgccatcgatgaagaaagccccaacggaacattgttggtggacaacatgcac atcaacggcgtggctgaaggtccggatcgaaccatctctctgtccctgagggacaacaac gatcgctgggtcattcttgacccttccaaacaagccctttacctaaatagcacgggacgg gttctggacagagatcccccctcgtacattcactccatcgtggttcaggttcagtgtacc aatgagctgataggcactgtgattttacacgaggtccgcatcgttgttcgagaccgcaac gacaacgcgccccgtttccagcagccgagatactacgtcgccgtgaatgagctgactcca gttggaacgactatcttttctggtttctcaggaaacaatggagcaacagacattgatgac ggtcccaatggacagatagagtacaccatccagtacaatccgagagacccgacagctaac agaacctttgacatcccgctgacactgtttggctctgtagttctcagagaaagactcaac tatgaggatataacaagatacctagtcatcatacaagctaatgatcgagcccctaatcca agtgaccgtcgaacagccaccaccacactaactgtggatgtactggacggtgatgatttg ggtccaatgtttctaccatgtacgcttgtgggaaatacccgtgattgtagtcccatcacg tataaggctaatgtgcttgagctgaccgagccgagtaaggtgaatccgctcaatgtgact ccacccatacaagctgtggaccaggacagaaacatacaacctccctctgacaggccgggg atcctgtattccatccttattggcaaaccagagtcctatgtagaatatttccgcttaaac agaaccacagcagaacttctgctactgaagcccatcgacagagagcactaccacagattt gatctggtgatcaaggcagaacaggacaacggccaccccctgccagctttcgccagcctt caaatcgaagttctggatgaaaacaaccaggcaccctacttcctgcagcctagttaccat ggctacatcagtgaggcatcgccagtgggaaccaccatagcgaccagcgccagcctatct gtaccactggccataatagcactggataatgatgtggaggagacacgggatccgcagctt caattctcactggacagctattctcatgttttctctgtatctgctactggaatcaaaaga tacctcactctggtgcagcctgtcgacagagagacacaagactcctacacattcacgctt gtagcatcagacggtgtccaggagagcactgcagttaccgtggccataacagtgttggat gctaatgacaacactccaacctttcctaacgtttcctataatgtgaacctgtttatcgac atgatgcctggagaagccgtgttacagctgtcagcatttgactccgatgcaggtcaaaac ggtctcatcacgtatcggattttggctggtcaccaaggacactttgtcataggcaacagc agtgggatcatcactgtggcaccaggcgtgcagctaagtgttgggcagagctatgcgttg accgtagaagccatggacaacgggcctgaaccccaccgaaggtcatccattactacggtc tacattgaagttttgccaccaaacaaccagagccctcctcgttttccgcggcaacaatac aacttggagatcagtgaagctatgaggactggggctacacttcttaatctgcaggcagtg gatcgggagagggaccccataacctacaaaatccaaagcggagacatccagggacatttt gcactacaacaaaattcaggctatttggttctggacaaacctctggacagggagactctg gattattacaccctggtggtgacagcctcagacggacacccagaaggaacgtctacagcg acggtgagcattgtggtgactgacgttaatgacaacgacccgctgttcgatacttccctg ccagtgaacctcactgtcattgaggagcagaaacacgcctacgttggacaggttaaggct acagatccagatctgggggcaaacggtcaggtccattatcggctcgtcaaccaccagggg ctgttttccatcaatgccactggaaccattacaactgcagtgccactggacagagaggtt aaaggccattactatctcacggttgaagcctgggatggtgcagagaatccacggcgatcc agattaacacttcgtgtcaccgttctggatatagacgacaacagcccaatattcacccaa caaacttacaatgtcaatctaccggagaacagcccaaagggcactgttatattacaatta aaggcgacagacgctgacctcaactccaaccttacttaccgaatcagaaccgaaggctcg gaccaggacatcactcagctgttccacatcgactccagaacaggcgagctttcagttctc aaggttctggacttcgaggctctgtctgagtcagagcccacatacacgttcactgtagag gccctggacacaaagggaaacatgcctcctggactagcctctgttacagtcagaataatg gacatgaatgacttttctccagtattcagccagtcagtgtaccgaggcatggttgcccct aatgctgtcaagggaaccatcgtaaccacagtgatggccaatgactctgaccctgcgggt actccagcaggtttagtacgttataaggtggaccaggaggcgtatccatactcagccagt atatttggcgtagaagaacagaccggacgtgtggttaccagagtgaacctgaacgaggag ccgaacatgaagttcagcctggtggtggtggcatacgatcatggtgagcctgtaatgaag aatacaactctggtagagatcacagtccttcagccctctgttatccctgtcttcacccgt gaagaatacaggtttctgccagtcagcgaggaggctgctgttggaaccccagtgggagtc atcttagcatctgctgtcaatcaaactatcgtgtactccatcatcgaaggcaacgagggt ggtgtgtttgctttaaatgaaacaacaggagtcatttacactgccaagcccctggactat gagaccaatgccagctatgttttgaaggtagaggcggactccatgagagtggtgtcttca aacctgcgagctccctcaaaaactaacacagctaaagtggtgattgatgtccaggatgaa aatgaccatgcgccagaattcactagacctctctacattggaggagttgcagaagactcc aaaaccttcacctcagtcttgcaagtacaggccctggacaaagacactggtaactacagt tctataatataccgtctgatcgtcccccctccagctagtaaagacactaaagacaccaaa gatggctttatcattgaaccgtacagcggcgttgtgaagactgctatcatgtaccgcaat atgaggaggtcgtattttaagtttgaggtggttgctacagacaactatggtcaaggacac agcagcaaagcagacatagtggtgtcagtcgtgaaccagctggacatgcaggtcgttgta tcaaatgtccctcctacgtacgtggagaaaaacaaagagaagcttctgagcattttggaa cgctatgtccaggaacagataccaggagcaaaggttgtcgtggaaaccatcgggcctcac cgccatggggatgggatggagcaggaagactacaccaagtcagaccttatgatttatgcc atcgacccactgacgaatagagctgtatcaaggcaggagctctacaagtttcttgatggt aaacttttggacatcaataaagagtttcagccctttctccctcctggtggccggattttg gaaatccgaactcctgaagtggttaccagtgtaaagaaagctgtgcagactgtaggctac acagagggggcgctgttggctctggctgtcattatcattatctgttgtgtacccgccata ctgattgtcataatcacctacaaacaattcaaagagcgtcaagcagagtgtgccaaaaca gcccgcatccagatggcactgccaacaggcaaacctgggggaggcactgccaacaacctg tatgaagagctgggtgacaacgccatgcgtggatatggacaacatgagacgcaacaactt ctccgaccttctctgctccgacctgaggaactatcaatggaatctggcatcgatcctggc catgactactacacacaggattattacaactatgaccacgggtacgaccttcctcagtac ggcagccgcaggaagctgatctcgccctctggcctctatgatgaatatggagaagtcgtt gttgacgatgacggcagctactactacagcccacaggagtctgatggagagggcagcaga aaacgtcgggtcaagttggtgtttgaccgagagtacgagaccagctccacgggtgaggaa agcgcgccagaaacccaacgtgggcgcttgtcctccacccacaacagccaagtcaacgtt aacgggagcatctacgtggcccagaatggctccatcatccgcacccgacgctcagtaaac accacagggcccacgcaaaccactactacgaacaacaacctcaaactcccctctcctatc ttcagctcaaggctggcaaagcactttaaaaaactagacaaaatggctgccacactggaa gaaagagttcccctgaacagcttcagaacgacgctggacggcgggtgcaacacactccgc actttccagagctcgggaacggttgccaccacgacaaccacgtcctctttctccaatcct gacagcaaaacgctgaatgtgttcaacacacgacaatccagcgtttcttcagggtcaacc agcaccagcaacgcaggccctgaaagcgtggcgtcgaaatcgaacctgctcaaagtggca caggaaggcacggagcagtcccagagcacagcggagagaaacgagtcggaagaaggcgag agagagtccaaggtagacggcagtaacgacgacacggacggactcgtcatcagagagccg ctggagtgcccgagtgacagaacgcagtcggacgaggaggagttatggatggggccgtgg aacagccttcacatacccatgaccaaactctga

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