Methanolobus zinderi: HWN40_00830
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Entry
HWN40_00830 CDS
T06665
Symbol
prf1
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mzi
Methanolobus zinderi
Pathway
mzi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HWN40_00830 (prf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzi03019
]
HWN40_00830 (prf1)
03012 Translation factors [BR:
mzi03012
]
HWN40_00830 (prf1)
Messenger RNA biogenesis [BR:
mzi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
HWN40_00830 (prf1)
Translation factors [BR:
mzi03012
]
Eukaryotic type
Release factors
HWN40_00830 (prf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
TBPIP
Zn_ribbon_LysW
Zn_ribbon_TFIIB
OxoDH_E1alpha_N
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QLC48920
UniProt:
A0A7D5EEY4
LinkDB
All DBs
Position
complement(163611..164858)
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AA seq
415 aa
AA seq
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MSEQSAHSKYEFKKHLEELRSKKGRGTELISLYIPTTKQLSDVTSQLKTEHGQASNIKSK
VTKDNVQGALDSLLSRLRYVEEVPENGIVFFTGAVDIGANKTNMETTIIEPPQPIVTYRY
HCDSSFFLEPLEEMLRDVKTFGLLVLDRREATVGLLVGKHIESYRHLTSAVPGKQRKGGQ
SAHRFQQLRLIAIHDFYKRIGDAASDVFLTVDHKDFEGVLIGGPSPTKEEFESGEFLHHE
LQRKILGLFDTAYTDESGLSELVNAASDRLADIDLMVEKKLMQRFMEELVSDSGKAAYGE
AQVRQNLSIGAVEILLISEDLRAERLTFQCSNGDYENKISRNFRPGEEPDFSEQCPECGT
NLEIVERVDVVDELSELADQMGTEVEFISTDFDEGSQLLNAFGGIVAVLRFNTGV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaatctgctcattctaaatatgaatttaagaaacatctggaggaactgcgc
tcaaagaagggtcgcggtaccgaactgatatcactttatatccctactacaaagcaacta
tccgatgttacctctcagctcaagacagagcacggccaggcctcgaacatcaaatccaag
gtcacaaaagataatgtacagggtgcgcttgattccctgctttcgagactgaggtacgtt
gaggaagtacccgagaacggtattgtgttcttcaccggtgcggttgacataggggcaaat
aaaacaaacatggaaaccaccataatagaacctcctcagcccattgttacctataggtat
cactgtgattcctcgttcttccttgaaccgcttgaggaaatgctgagggacgttaagaca
ttcggtctgcttgtactcgacaggagagaggccacggtgggtctgctggtgggaaaacat
atagaatcatacaggcatctcacatccgcagtacccggcaaacagaggaagggtggtcag
agtgctcacaggttccagcagctaaggcttatcgccatccatgatttctacaaacgtatt
ggtgatgctgcaagtgacgtattcctgacagtggatcataaggactttgaaggtgttctc
ataggcggtccctcgcctacaaaggaagagttcgaatcaggagaattcctgcaccacgag
ctgcagagaaagatcctggggcttttcgatactgcctatactgatgaatcagggctctca
gagcttgtgaacgctgccagtgacaggctcgccgatatcgatctcatggtcgagaaaaaa
ctgatgcagcgtttcatggaagaacttgtgtctgattccggtaaagctgcctatggtgaa
gcacaggtaagacagaacctgagtatcggagctgttgagatattgctcatatccgaggat
ctcagagccgagcgcctgactttccagtgttccaatggcgattatgaaaataagataagc
aggaatttcagacccggcgaagaacctgacttctcggagcagtgtcctgaatgtggcacc
aaccttgagatagtcgaaagggttgacgtggtggatgagctgtcagaacttgcggaccag
atgggaactgaggtggaattcatatccacggactttgacgagggttcccagttgctcaac
gcttttggtggaattgttgctgtactgaggttcaatactggtgtctga
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