Candidatus Nucleicultrix amoebiphila: GQ61_02590
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Entry
GQ61_02590 CDS
T04833
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
naf
Candidatus Nucleicultrix amoebiphila
Pathway
naf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
naf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GQ61_02590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naf03400
]
GQ61_02590
DNA repair and recombination proteins [BR:
naf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GQ61_02590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_2
HHH_5
UVR
HHH
HHH_3
DUF5588
Motif
Other DBs
NCBI-ProteinID:
ARN84393
UniProt:
A0A1W6N3J4
LinkDB
All DBs
Position
525396..527258
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AA seq
620 aa
AA seq
DB search
MPEHISPVTSLNRGLEVISDYVKNLPLKPGVYRMLGKNDTVLYVGKAKSLKKRVQSYTQP
QRLPNRLKRMISETISMEFVITHNEVEALLLEATLIKNLNPRYNVLFKDSKSFAYILITE
GQWPRLGKHRGAKNIPGKYYGPFASTEAVHQTINSLHKIFKLRNCSDSYFAARKRPCLQY
HIKRCTAPCVRYINEEDYNTSVRQAKDFLEGKSQLLQKELSEKMLAASAKRDYEHASFYR
DQIRALTQIQVHQNMNPTFKESTDIIALAEDKGSVAIQIFFFRNSSHFGSRTYFPLHTDE
TSPEDVLTSFLTQFYNDHQPPELVLINYDLEDKNLLQNAFHEKYGHSVTFLKPLKGEKKK
LIERTYENACEALERHLAEASTLKSILEKLTEVFQLPNIPERIEIYDNSHIQGSNAVGAM
VVASRRGFETKLYRKFTIKTAGPSGITPGDDFGMMREVLTRRFSGSLLKKVENTLPDLIL
IDGGKGQLSTAHSVLDELNLDIPILAIAKGPERNAGKETFFKKDSHPITLERHRPILHYL
ERLRDEAHRFAIGTHRKKREKALTLSPLDEISGIGAERKKILLRHFGSTRNIENAGLEDL
KKVNGISAALANKIYDFFHP
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacatatttctccagtaacttctttgaaccgcggtcttgaagttataagcgat
tacgttaaaaacttacctcttaaaccgggtgtctaccgtatgctggggaaaaacgacacg
gttctttatgtggggaaagccaaaagtcttaagaagcgggtgcaaagttatactcaaccc
cagcgtttaccaaatcgtcttaaacgtatgatctcagaaacaatttccatggagtttgtg
ataactcataatgaagttgaagctttgcttctagaagcaacactcatcaaaaatcttaac
cctcgttataatgtcctttttaaggatagtaaatcatttgcctatattttgattacagaa
ggtcaatggcctcgtcttggaaagcatcgtggtgcaaaaaatatcccaggtaaatattat
ggtccatttgcttctactgaagccgttcatcagactatcaatagtctgcacaagatcttt
aaactgagaaattgcagcgatagttattttgctgcacgaaaacgtccttgtttacaatat
cacatcaaacgctgcactgccccttgtgtgcgctatatcaatgaagaggattacaacacg
tctgtacgacaagcaaaagattttctcgaaggcaagagtcagcttctacaaaaggaattg
agtgaaaaaatgttggctgcaagtgctaaacgtgactatgaacatgcaagcttttatcgt
gaccaaattcgtgcgctgacccagatccaagtacaccaaaatatgaatcctacattcaaa
gaaagtacggatatcattgccttagcagaagataaaggtagcgttgctattcaaatcttt
ttctttcgaaatagtagtcattttggcagcagaacatactttcctcttcacaccgatgaa
acctcccccgaagatgttctcaccagtttcttaacccaattttataatgatcatcagcct
ccagagcttgtattaatcaattacgaccttgaagacaaaaatcttttacaaaacgccttt
catgaaaaatacggtcattcagtcaccttcctcaaacctctcaaaggagagaagaaaaag
ttaatagagcgtacctacgaaaacgcttgtgaagctttagagagacatcttgcagaagct
tcaactctcaaatcgatcctggaaaaattgacggaagtatttcagttaccgaatattcct
gaacgcattgaaatatacgataacagccatattcaaggatcaaatgctgtgggagccatg
gtggttgcttcaagaagaggctttgaaacaaaactctaccgaaagtttacaataaaaacc
gctggaccatcagggatcacacctggagatgattttggaatgatgcgagaagtcttaacg
cgacgctttagcggctctcttctcaagaaggttgaaaatactttaccagaccttatcttg
attgatggaggcaaaggacaattaagcacagcccactcggtgctcgatgaattaaacctt
gatattcctattctagctattgctaaaggacctgagcgtaatgcgggaaaggaaactttt
tttaaaaaagattctcatcccattactcttgaacgtcatcgtccaatccttcattatcta
gaacgattgagagatgaagcgcaccgctttgcgattggcacccatcgaaagaaacgtgaa
aaggccctcactttgtcgcctctcgatgaaatttcaggaattggtgctgaacgcaaaaaa
attctcttgcgccattttggatctactcgcaatatagaaaatgcagggcttgaagactta
aaaaaagtgaatggaattagtgcagctcttgcaaataaaatttatgattttttccatcct
tag
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