Nocardia arthritidis: F5544_15550
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Entry
F5544_15550 CDS
T06735
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nah
Nocardia arthritidis
Pathway
nah03030
DNA replication
nah03430
Mismatch repair
nah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F5544_15550 (dnaE)
03430 Mismatch repair
F5544_15550 (dnaE)
03440 Homologous recombination
F5544_15550 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nah03032
]
F5544_15550 (dnaE)
03400 DNA repair and recombination proteins [BR:
nah03400
]
F5544_15550 (dnaE)
Enzymes [BR:
nah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F5544_15550 (dnaE)
DNA replication proteins [BR:
nah03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F5544_15550 (dnaE)
DNA repair and recombination proteins [BR:
nah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F5544_15550 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
QIS10992
UniProt:
A0A6G9YCR5
LinkDB
All DBs
Position
3507017..3510568
Genome browser
AA seq
1183 aa
AA seq
DB search
MAASSGSFVHLHNHTEYSMLDGAAKITPLFKEANRLGMTAVGMTDHGNMYGASEFYNSAK
KQGIKPIIGIEAYIAPESRFNTKRVLWGDPSQKGDDVSGSGAYTHMTMVAETATGLRNLF
KLSSLASIEGQLGKWARMDEEIIAQYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKW
QEIFGKENFFLEVMDHGLSIERRVREGLLEIGRKLDIPALATNDCHYVHESEAANHEALL
CVQTGKTLSDPTRFKFDGSGYYLKSAEEMRAIWDAEVPGACDNTVRIGERVQSYDDVWKH
HDRMPIFPVPEGETQATWLRKEVLRGLDRRFPDGPPREYLDRADYELGVIIEMGFPAYFL
VVGDLISHAREVGISVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDI
DIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARVQFGQPGFAIADQIS
KALPPPIMAKDIPLSGIMDPEHERYKEAAEVRELINTNPDVNKIYETARGLEGLIRNAGV
HACAVIMSSEPLMDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDALV
NIKANRGIDLDLDHLPLDDKPTYELLSRGDTLGVFQLDGGAMRDLLRRMQPTGFEDIVAV
LALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEVPLKEILADTFGLIVYQEQIMQIAQ
KVAGYSLGRADILRRAMGKKKAEVLEAEFEGFEKGMLENGFSKPAIKALWDTILPFAGYA
FNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAQYLADCRRLGITVLPPD
VNESEQNFASVGDDIRFGLGAVRNVGANVVSSIIAARKEKSKFTDFSDYLNKIDALACSK
KVTESLIKAGGFDSLGHPRKGLMLVHSDAIDAVMSTKKAEAMGQFDLFGGLDDADDSITS
VFNVKVPDDEWEAKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTQIPAILEGDIKDGT
QVTVGGILAAVNRRINKNGLAWASAQLEDLSGGIEVLFFPQAYSVYGMDVVEDAVVLVKA
RVSVRDDRISLIANDLAVPDLSAIGVAKPLAVTMPTRMCTPDKVSALKRVLTSHPGTSDV
HLRLVGAGEKTHLLKLDDRLRVSPSSALMGDLKALLGPGCLAS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcctcgtccggatcgttcgttcacctgcacaaccacaccgagtactcgatgctc
gacggcgctgcgaagatcacgcccctgttcaaggaggcgaatcggctcggcatgaccgcc
gtcggcatgaccgaccacggcaatatgtacggcgcgtcggagttctacaactcggccaag
aagcagggcatcaaaccgatcatcggcatcgaggcctacatcgcgccggaatcccgcttc
aacaccaaacgcgtcctgtggggcgatccgagccagaagggtgacgacgtctcgggttcg
ggcgcctacacccatatgacgatggtcgccgagaccgcgaccggactgcgcaacctgttc
aagctgtcgagcctggcctccatcgagggtcagctcggcaagtgggcccgcatggacgag
gagatcatcgcccaatacgccgagggcatcatcgcgacgacgggctgcccatcgggtgag
gtgcagacccgcctgcggctggggcacgagcgtgaggcgctggaggccgcggccaagtgg
caggagatcttcggcaaggagaacttcttcctcgaggtgatggatcacgggctgtccatc
gagcgccgggtgcgcgaggggctgctggagatcggccgcaaactcgatattccggcgttg
gccaccaacgactgtcactacgtgcacgaatccgaggcggcgaaccacgaggcgctgctg
tgcgtgcagaccggcaagacgctgtccgatcccacccgcttcaaattcgacggctccggc
tactacctgaagtccgccgaggagatgcgggcgatctgggatgcggaggtgccgggcgcc
tgcgacaacacggtgcgcatcggcgagcgggtgcagtcctacgacgatgtgtggaagcac
cacgaccggatgccgatcttcccggtgccggagggcgagacgcaggccacctggctgcgc
aaggaggttttgcgcgggctggaccggcggttcccggacggcccgccgcgcgaatacctg
gatcgcgccgactacgagctcggcgtcatcatcgaaatgggttttcccgcctacttcctc
gtggtcggtgacctgatcagccatgcgcgcgaggtcggcatcagcgtcggacccggtcgc
ggttcggcggccggttcgctggtcgcctacgccatgggcatcaccaatatcgacccgatt
ccgcacggcctgctgttcgagcgattcctgaacccggaacgcgtctcgatgcccgatatc
gatatcgacttcgacgatcgccgccgcggtgagatggtccgctacgccaccgagaagtgg
ggcagcgaccgagtggcccaggtgatcaccttcggcaccattaaaaccaaggcggcgctg
aaggattcggcgcgcgtccagttcggccagccgggtttcgcgatcgccgaccagatttcc
aaggcgctgccgccgccgatcatggccaaggacattccgctctcgggcatcatggatccc
gagcacgagcggtacaaggaggccgccgaggtccgcgagctcatcaatacgaacccggac
gtcaacaagatctacgagaccgcgcgcggactggagggcctgattcgcaacgccggtgtg
cacgcctgcgcggtgatcatgtcctccgaaccgctgatggacgcgatcccggtgtggaag
cgggcgcaggacggcgcgatcatcaccggctgggactacccgtcgtgtgaggccatcggc
ctgttgaagatggacttcctcggcctgcgcaacctcaccgtcatcggtgacgcgctggtc
aacatcaaggcgaaccgcggcatcgatctggacctggaccacctgccgctggacgataag
ccgacctacgaattgctttcccgcggtgacactctcggcgtcttccagctcgacggtggc
gccatgcgcgatctgctgcggcgcatgcagcccaccggcttcgaggatatcgtcgccgtg
ctcgcgctgtaccgccccggtccgatgggcatgaacgcgcacaacgactacgccgaccgc
aagaacgggcggcaagaggtcaagccgatccatccggagctcgaggtaccgctgaaggag
atcctggccgacaccttcggcttgatcgtgtaccaggagcagatcatgcagatcgcgcag
aaggtggccgggtactcgctcggtcgagccgatattctgcgccgcgccatgggtaagaag
aaggccgaggtcctggaggccgaattcgagggcttcgagaagggcatgctggagaacggt
ttctccaagcccgcgatcaaggcgctgtgggacacgattctcccgttcgccggttacgcg
ttcaacaaatcgcatgccgccggctacggtctggtgtcgttctggaccgcctacctcaag
gccaactatccggccgaatatatggcgggcctgctcacctcggtcggtgacgacaaggac
aaggccgcacagtatctggccgactgccgccgcctcggcatcaccgtgctgccgccggac
gtcaacgaatccgagcagaacttcgcctcggtgggcgacgacatccggttcgggctcggc
gcggtgcgcaatgtcggcgcgaacgtggtgtcctcgatcatcgccgcgcgcaaggagaaa
tcgaagttcaccgacttctccgactatctgaacaagatcgacgcgctggcctgctccaag
aaggtcaccgaatccctcatcaaggcaggcggattcgattcgctcgggcatccccgcaag
gggctgatgctggtgcactccgacgccatcgatgcggtgatgtccaccaagaaggccgag
gcgatgggtcagttcgacctgttcggcgggttggacgacgccgacgactcgatcacctcg
gtgttcaacgtcaaggtgcccgatgacgagtgggaggccaagcacaagctggcgctggaa
cgggagatgctgggcctgtacgtatccgggcatccgctcaacggtgtcgaacacgtactc
gcggcgcagtccgacacccagatcccggccatcctggaaggcgatatcaaggacggcacc
caggtgaccgtcggcggcatcctcgccgcggtgaaccggcgcatcaacaagaacggattg
gcttgggcgtcggcgcaattggaggatctgtccggcggtatcgaggtgctgttcttcccg
caggcctattcggtgtacggcatggacgtggtcgaggatgcggtggtgctggtgaaggcg
cgcgtctcggtgcgcgacgaccgcatctcgctgatcgccaacgaccttgcggtgccggat
ctttcggccatcggcgtggccaagccgctggccgtcaccatgccgacccgcatgtgcacc
cccgacaaggtgagcgccctcaaacgcgtcctgaccagccacccgggcacctccgacgtg
cacctgcgcctcgtcggcgccggtgagaagacccacctgctgaaactcgatgaccgcctg
cgcgtttcgccgtcctccgccctgatgggcgacctcaaggcgctgctcggccccggctgc
ctggccagctag
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