Necator americanus (New World hookworm): NECAME_15083 Help Entry NECAME_15083      CDS       T04867                                  Name (RefSeq) CCR4-Not complex component, Not1   KO K12604   CCR4-NOT transcription complex subunit 1 Organism nai  Necator americanus (New World hookworm) Pathway nai03018   RNA degradation Brite KEGG Orthology (KO) [BR:nai00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     NECAME_15083  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:nai03019]     NECAME_15083 Messenger RNA biogenesis [BR:nai03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      NECAME_15083   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      NECAME_15083 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind DUF3819 ARM_Cnot1 NOT1_connector Motif Other DBs NCBI-GeneID:  25355110 NCBI-ProteinID:  XP_013292001 UniProt:  W2SJH4 LinkDB All DBs Position Unknown AA seq 1308 aa AA seqDB search MTTKKDEVLALIDEHGEPFIRWFAQYVVMKRVSIEQNFLPLYNQFIQAINHPLLDTHIKR ETFRNIRILLRSDKRQAASNYSDRQLLKNLGMWLGSITIARNKPILIHELDLKALLMEAY YKGQQELLFVVPFIAKNSFFVWQNTVIDILFSATCAWIRSILKVLAELHNEPDLKINLKF EIEVLCKELSVDLESLPVEGILKDTDRLVRVTQQLSDLKTLQQPDQANSSPVPGQMRLAP DSPSTPNPESDGSSAIVEGGAGAVIIPPLHFAYHDINVTSYEGLIPHIKVQLSLPLFQLH PQMKHHVRPALTQAIKELIGPVAERALKIAMIVTETLVRKDFALDPDENNMKKAAFHMMR AMTAGMAMITCRDPLAGTMVSLLQQSFTNSLRTSNTELSKMIEEAARVITQDNIELTTNF IVKTACEKAAAELEKRLDGEAARRLAVRREGAEWHDAAMEKIQAELPPRIAVQVGPTRKE HIAIYEQFSSRICGFKPTISDESSASAMETVNRTMTLPETAKEVEQLTQQLNSIIKEVDI TMQAQPNPTNKAFQGVGAIRDLLSQLASNPRDSMTVVNLITRSVEHLLHAYHVDSTSKAL DVEWARRLRDLFLGVCRVLLTQFTIADLSRRITGSIVNVRMDYKWNVEAIEVLLKHQLVQ THVFDQHLAHVMDGGSNMEATLFAQRFFRLIGFNDAARMPVIKEAFPATYEQLLKMQQMQ ALLRQQAAAAGSTEPNLDSPLGPAAMDAIVAATAGPGVPPAVQPSAEEPGMSDKVEIILR EWIGLCYTPMAQRNPKEALFQMIVMMHEHGVLSGDEKISQFIRMCTEMCVDVALRLLKTD ATAPVSQSNIVRQRCYYTLDAFVKLMALMIKYSDGGSASPSGTSKIALLKKVLHIITSVL HVDHEVRRHEFNAMPYHRILITLFIELTTPDGSNLESIAWSIIEAFGQNALFLLQPRRCP AFAYAWLDFVGHRAVIGALLGGNGFAENVDPMKTSAMYTQLLICHLKFLAPFLRNIHLPK SIAVLYKGTLRVLLVILHDFPELLCEYHYVIIDTIPPNCVQLRNLVLSAYPRNMRLPDPF ALNFKQVDSIPEMAIEPKSNLNMASIIPDSIRLPLDAYLRTRSAVDFLSALPGMLQISEN PGSKYNSTVMNAMVLYVGMKAIESLHERRQRISIHTIAHTAFMDIFQNLAVQLCTEGRYL LFNAIANQLRYPNAHTHYFSCVFLFLFLNSDHDAIQEQITRILFERLVALRPHPWGLLIT FIELIKNPVYNFWKYEFTRCAPEIERLFQNVANTCVTARPADSEASKA NT seq 3927 nt NT seq  +upstreamnt  +downstreamnt atgacaacaaaaaaggatgaggtgctagcactgatagatgaacatggcgagccttttatc cggtggtttgctcagtatgtggtgatgaagcgggtatcgattgagcaaaacttcttgccg ctctataatcaattcatccaagcgataaatcatccgcttctggatacgcatatcaagcgg gagacgttcaggaacatcaggattctgcttcgctcggacaaacggcaagctgcgtccaac tacagtgaccgtcaactactgaaaaaccttggaatgtggctagggtcgatcacaatagca cgaaataaaccgattctgatacatgagttggatctgaaagctttgctgatggaagcgtat tacaaaggccaacaagagctactatttgtcgtaccttttatcgcgaaaaattcttttttc gtgtggcaaaacacagttattgatattttgttcagtgcaacgtgcgcttggatacgctct atattaaaagtcttagccgaactgcacaacgagcccgatttaaagatcaacttgaagttt gaaatagaggtgctgtgcaaggaactgtcggtggatttggagtcgctaccagttgagggt atcctgaaagacacggaccgtcttgtgagggtcacacaacagttatcagatctgaagacg ttacaacagcccgatcaagcgaacagcagtccagttccgggacaaatgagactagcaccg gattccccatccacaccaaacccggaatcggatgggtcatcagctatcgttgaaggaggt gctggggctgtgataataccgccgcttcattttgcatatcacgatatcaatgtgacttct tatgaagggctcatacctcatattaaggttcaactgtcactgccgttgtttcagcttcac cctcaaatgaaacaccatgttcgaccggccctcacgcaagccatcaaagaactcataggt cctgtggctgaaagagcgctgaagatagctatgatcgtcactgaaacccttgtacgcaag gatttcgctctcgatccagatgagaacaacatgaaaaaagcagctttccatatgatgcga gcgatgactgctggaatggcgatgatcacgtgccgcgatcctcttgccggaacgatggtg tcattgttgcagcaatcgttcaccaactcgttgcgtacttcgaacaccgaactgtcaaaa atgatcgaggaagcggcgagagtaatcacgcaagataatatcgagctaacaacgaacttt attgtgaagacagcttgcgaaaaggcagcagcagaactggagaaacgtctcgatggcgaa gcggctcgacggctcgctgttcgacgcgaaggcgccgaatggcatgacgccgctatggag aagatacaggcggagctgcctcctcgaatagctgtgcaagttggcccgacgcggaaagag cacattgctatttacgagcagttcagcagtcggatttgtggctttaaaccaaccatcagt gatgaatcgtcagcatctgctatggaaactgtgaatagaacgatgacattaccagaaaca gcaaaggaggtggagcagctcactcagcaattgaatagcattatcaaggaggtggatata actatgcaagctcaaccgaatcctacgaataaggccttccaaggagtgggtgccatcaga gatctgttgtcacagttagcttcgaacccacgtgattccatgacagttgtgaatctcatc acaagatccgtagaacatcttctccatgcctatcatgttgatagcacgtcgaaagctctt gacgtggaatgggccaggagacttcgggatttgttcctgggagtgtgtcgtgtacttcta acacagttcactatcgctgatttgtcaagacgtatcactggaagcatcgtaaatgtgaga atggattacaagtggaacgtagaggccattgaggtactgctaaaacatcagctagtacag acgcatgtcttcgatcagcatttggcccatgtcatggatggaggttcgaatatggaggcg acgttgttcgcacaaaggttcttccgccttattgggtttaacgatgcagctaggatgcct gtgatcaaggaggctttcccagcaacttacgaacagctccttaaaatgcaacaaatgcaa gcccttctacggcagcaagctgcagccgccggatccacggaaccgaatcttgattctcct ctgggacctgctgcaatggatgccattgtagcggctactgcaggacctggagtaccgccg gcagtgcaaccttcagcagaagaacctggaatgtcggacaaggtcgagatcattctgaga gaatggattggactgtgctacacgccaatggctcaaagaaatccgaaagaagccttgttc caaatgattgtgatgatgcatgaacacggtgtactatctggtgatgagaagatctcccag ttcatccgtatgtgcaccgaaatgtgcgttgatgttgcgttgagactattgaaaactgac gccacagctccagttagtcagtctaacattgtacgtcaacgatgctactacactctcgac gcctttgtgaagctgatggcgctcatgatcaagtattcggatggaggaagcgcttcaccg tcaggaacatcgaaaatagcgctactgaagaaggtcctacacatcatcacaagtgtattg cacgtcgaccatgaagtcagaagacatgaatttaacgccatgccctatcatcgaatactc atcacattattcatcgagctaaccacaccagatgggtcaaatctggaatcgattgcatgg tcgatcatcgaggcttttggacagaacgcactgtttttgctccaaccgcgtcgatgtcca gcatttgcctacgcctggcttgatttcgtaggtcatagagcagtgattggagcgcttttg ggaggcaacggttttgctgaaaatgtagacccaatgaaaacgtcagccatgtacacgcag ttgttaatatgtcatctgaagttcctcgcaccgttcctgaggaatattcatctaccgaag tcgattgcggtgttgtacaagggaacattgagggtgctgctggtaatcctgcatgatttc cctgaacttctgtgcgaatatcactatgtgataatagacacaattccaccgaactgtgtg caactccgaaatcttgtcttgtctgcgtatccacgcaacatgaggcttccagacccgttt gcgttgaatttcaagcaagtggacagtattccggagatggcgatagagcccaaatctaat ctgaatatggcttcgatcataccagattccatccgattacccctggatgcttacctgagg acaagatctgcagttgatttcttgtcagcgctgccaggaatgttgcaaatatccgagaat cccggatcgaagtataacagcacagtgatgaacgcaatggtactatacgttggaatgaaa gccatcgaaagtcttcacgagcgtcgtcaacgtatttccatccatacgattgctcataca gctttcatggatattttccaaaatcttgctgttcagctgtgtactgagggtcgatatctt ttgtttaatgctatcgcgaatcaactacgctaccctaatgcacacactcactactttagc tgtgttttcttgttcttattcctgaattcggaccacgatgcgattcaggaacaaatcact cgaattctgttcgaacgtctggtagcacttcgccctcacccatggggtctgctgatcaca ttcatcgaactaatcaaaaatcctgtgtacaacttctggaagtacgaattcacccggtgc gctcctgaaattgagcgattattccaaaatgtggcgaacacttgtgtcacagcacgtcca gctgattcagaggcgagcaaagcttga

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