Nocardiopsis alba: B005_3075
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Entry
B005_3075 CDS
T02218
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nal
Nocardiopsis alba
Pathway
nal02024
Quorum sensing
nal03060
Protein export
nal03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
B005_3075 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
B005_3075 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B005_3075 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nal02044
]
B005_3075 (ffh)
Enzymes [BR:
nal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
B005_3075 (ffh)
Secretion system [BR:
nal02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
B005_3075 (ffh)
Eukaryotic Sec-SRP protein
B005_3075 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
nSTAND3
Zeta_toxin
MMR_HSR1
CbiA
ArsA_ATPase
AAA
AAA_18
APS_kinase
AAA_30
AAA_33
AAA_16
TsaE
AAA_24
ABC_tran
AAA_25
NPHP3_N
SLFN-g3_helicase
YebG
6PF2K
NACHT
nSTAND_NTPase7
AAA_17
Motif
Other DBs
NCBI-ProteinID:
AFR06444
UniProt:
J7L6L5
LinkDB
All DBs
Position
3201744..3203333
Genome browser
AA seq
529 aa
AA seq
DB search
MFETLSDRLTSVFSSLRGKGRLSEEDINATAREIRLALLEADVALPVVRDFIARIKERAR
GEEVSKALNPAQQVIKIVNEELVEVLGGETRQIRFAKNPPTVIMLAGLQGAGKTTLAGKL
AKWLSADRNTPLLVAADLQRPNAVTQLQVVGERAGTPVFAPEPGNGVGDPVEVARESIEH
ARRNNHNVVIIDTAGRLGVDTEMMRQAADIRDAVRPDEIVFVVDAMIGQDAVNTAQAFLD
GVGYDAVALTKLDGDARGGAALSIRHLTGRPIMFASTGEKLEDFDLFHPDRMASRILDMG
DVLTLIEQAQRTFDEAEVEKMASTMASDEDFTLDDFLQQMMMVRKLGPIGNLLGMMPGMG
QMRDQIDNIDDKSLDRIQAIIQSMTPAERANPKMINGSRRLRIANGSGTQVGDVNGLVTR
FFEAQKMMRKMKNGGGMPGMPGMPGMGGGKKAKKAKKVKKGKQRSGNPMKARQQEAEREA
ERRRRQEEGPQETPQLPPGLGGGQQPTLPPGFGGPNMPDLSNFKFGKDK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgagacgctttccgaccggctgacatcggtcttctcctcgctgcgcggcaagggt
cgcctgtccgaggaggacatcaacgcgaccgcgcgcgagatccgtctcgcgctgctggag
gcggacgtcgcgctgccggtggtccgcgacttcatcgcgcggatcaaggagcgcgcccgc
ggtgaggaggtctccaaggccctcaaccccgcccagcaggtcatcaagatcgtcaacgag
gaactcgtcgaggtcctcggtggcgagacccgccagatccggttcgcgaagaacccgccc
accgtgatcatgctcgcgggtctccagggcgcgggtaagacgaccctggccggcaagctg
gccaagtggctctcggcggaccgcaacacaccgttgctggtcgccgccgacctccagcgg
cccaacgcggtcacccagctccaggtggtcggtgagcgcgcgggcaccccggtgttcgcc
cccgagccgggcaacggtgtcggcgacccggtcgaggtggcccgcgagtcgatcgagcac
gcccgtcgcaacaaccacaacgtcgtcatcatcgacaccgccggtcgtctcggtgtggac
accgagatgatgcggcaggccgcggacatccgtgacgcggtgcggccggacgagatcgtc
ttcgtcgtcgacgcgatgatcggtcaggacgcggtcaacaccgcccaggccttcctcgac
ggcgtcggctacgacgcggtggcgctcaccaagctcgacggcgacgcccgaggcggcgcg
gccctgtcgatcaggcacctcaccggtcgcccgatcatgttcgcctccaccggcgagaag
ctcgaggacttcgacctcttccacccggaccggatggcctcgcgcatcctggacatgggc
gacgttctcaccctcatcgaacaggcgcagcgcacgttcgacgaggccgaggtcgagaag
atggcctcgaccatggcctcggacgaggacttcacgctggacgacttcctccagcagatg
atgatggtccgcaagctcgggcccatcggcaacctgctcggcatgatgccgggcatgggc
cagatgcgcgaccagatcgacaacatcgacgacaagtccctggaccgcatccaggcgatc
atccagtcgatgaccccggccgaacgcgccaaccccaagatgatcaacggttcgcgtcga
ctgcgtatcgcgaacggttccggtacccaggtcggcgacgtcaacggtctggtcacccgt
ttcttcgaggcgcagaagatgatgcgcaagatgaagaacggcggcggcatgccggggatg
cccgggatgccgggcatgggcggcggtaagaaggccaagaaggcgaagaaggtcaagaag
ggcaagcagcgcagcggcaacccgatgaaggcccgtcagcaggaggccgaacgcgaggcc
gagcgccggcggcgtcaggaggaggggccccaggagaccccgcagctccctccgggcctg
ggcggcggtcagcagcccacccttccgcccggtttcggcggccccaacatgccggacctg
tcgaacttcaagttcggcaaggacaagtag
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