Neisseria animaloris: NCTC12227_01781
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Entry
NCTC12227_01781 CDS
T06907
Name
(GenBank) rna polymerase sigma-54 factor rpon
KO
K03092
RNA polymerase sigma-54 factor
Organism
nani
Neisseria animaloris
Pathway
nani02020
Two-component system
nani02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nani00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC12227_01781
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC12227_01781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nani03021
]
NCTC12227_01781
Transcription machinery [BR:
nani03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC12227_01781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
Phage_terminase
HTH_Tnp_ISL3
HTH_23
Motif
Other DBs
NCBI-ProteinID:
VEJ22009
UniProt:
A0A1X3CHI4
LinkDB
All DBs
Position
1:1909180..1910532
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AA seq
450 aa
AA seq
DB search
MSQNFGLKLKQTQQLNQHLQQSLRILQMSGLELEREVDDWLQDNPLLERPEPADDAGDTE
FSQISASLPRSNQIGGDDAEDVWATIAGEDDFNAFLHKQVCEHPLSEEEAARIHILIDFL
DDQGYFTDSLGEVIDHTPLEWMLNENDLQEALDLLQTFDPAGVGASNLTESLMLQLLRLP
ASPERQLAAKIVQQSLDSLSRSRQQNLAKARKMFPDSDIDTIQTALDLISKLNPYPAYGF
ASAEPTAYVQPDVWVKETKTGWTVIGNDNAWPKVQLNREYCDLLKEAGEVSPEWKEKLSE
ARQKIDSLELRKSTVIRLAEYIVEKQEDFFVFGEIGLTPMLLKDAAAELGVAESTVSRAV
NHKYLSCPRGVFALRYFFTQAVCAEDGEGVSQNAVKAVITQLVESEDKFKPHSDEMLSKL
LKQQGIDIARRTVAKYRESLNIPSATQRRL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaattttggactaaaactcaaacaaacccagcagctgaaccaacaccttcag
cagtcgttgcgtatactgcaaatgtccgggctggaacttgagcgcgaagtagacgactgg
ttgcaagacaaccctctgctggagcgccccgagcccgccgatgatgcgggagataccgaa
ttttctcaaatttccgcctctctgccgaggagcaaccaaatcggcggagatgatgccgaa
gacgtatgggccaccatcgccggcgaagacgacttcaatgcttttctgcacaaacaagtt
tgcgaacatcccctaagcgaagaagaagctgcacggatacatatcctcattgattttctc
gacgaccaaggttatttcaccgacagcttgggtgaggtaatcgaccacaccccgctggaa
tggatgctcaacgaaaacgatttgcaggaagcactcgatctgctgcaaaccttcgatccc
gcaggtgtaggggcctcaaatttaaccgagtctctgatgctgcaactcttacgcttgccc
gcctctcctgaacgccaactggctgccaaaatcgttcaacagtcgctggacagcctaagc
agaagccgccagcaaaatctggccaaagcccgcaaaatgtttcctgattccgatatcgat
accattcagacggccttagacctgatatcgaaactcaatccctacccggcctatggattt
gcttccgccgagccgacagcctatgtacagcccgatgtatgggtgaaagaaaccaaaacc
ggctggacggtcatcggcaacgacaacgcatggccgaaagtacagctcaatcgtgaatat
tgcgacctgttgaaagaagctggagaagtcagcccggagtggaaagaaaaattaagcgaa
gcgaggcagaaaatcgacagcttggaactacgtaaaagtacggtaatccgtttggcagag
tacattgttgaaaagcaggaagattttttcgtattcggcgaaatcggcctgacacccatg
ctgctgaaagatgccgctgccgaactcggggtagctgaaagcaccgtatcccgtgccgtc
aaccataaatatttgtcttgcccgcgcggagtgtttgcgttacgctatttcttcacacag
gccgtttgtgctgaagacggcgagggggtgagccaaaatgcggtcaaagccgtaatcact
cagttggtcgagtcggaagacaaattcaaaccgcattctgatgaaatgttgagtaaactt
ttgaaacagcaaggcatcgatatcgcccgccgcaccgtagccaaatatcgagaatcattg
aacattccgtctgccacacaacgcagactatga
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