Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112401501
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Entry
112401501 CDS
T08872
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04151
PI3K-Akt signaling pathway
nasi04510
Focal adhesion
nasi04512
ECM-receptor interaction
nasi04518
Integrin signaling
nasi04820
Cytoskeleton in muscle cells
nasi04974
Protein digestion and absorption
nasi05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
112401501
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112401501
04518 Integrin signaling
112401501
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112401501
09142 Cell motility
04820 Cytoskeleton in muscle cells
112401501
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
112401501
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
112401501
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nasi04147
]
112401501
00536 Glycosaminoglycan binding proteins [BR:
nasi00536
]
112401501
Exosome [BR:
nasi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112401501
Glycosaminoglycan binding proteins [BR:
nasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
112401501
Hyaluronan
Extracellular matrix or blood plasma proteins
112401501
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
112401501
NCBI-ProteinID:
XP_024603570
UniProt:
A0A341BLE1
LinkDB
All DBs
Position
Unknown
AA seq
2268 aa
AA seq
DB search
MKMLLTLLLMIICSHVSVNQHSGPEYADVVFLVDSSDHVGIKSFPFVKTFINKMITSLPI
EAHKYRVGLAQYSDGLHREFQLSTFKSRGPMLNHLKKNFRFLGGSLRIGKTLQEVHTTYF
SNGRDRRQFPPILVVLASAESEDAVEEASKALRNDGVRIISVGMQGASEETLKAMATGQF
HYSLRTVRDLSTFSQNMTQILKDAAQYKEGAVNDILVEVCQGPSVADVVFLLDMSISGSW
EDFDYLKEFLEESVSALDIKENCMRVGLVAYSNETKVINPLSSGINKSEVLQDIQSLSPQ
AGKAYTGAALRKIRKEVFSVQHGSRKNQGVPQIAVLVTHSPSEDNVTKAAVNLRRQGVTI
FTMGIDGASDAQLEKIASHPAKQYISKLKTFSDLAAHNQTFLKKLRNQITHTVSVISERT
ETLKSGCVDTEEADIYLLIDGSGSTQATDFQEMKTFLSEVVGMFNIAPQKVRVGAVQYAD
RWDLEFEISKYTNKHDVGKAIENIRQLGGNTNTGAALNFTLGLLQKAKRQRENRVPSHLV
VLTNGVSQDSILGPANRLREELIHVYAIGVKEANETQLREIAGEEKRVYYVHDFDALKDI
RNQVVQEICAEEACKEMKADIMFLVDSSGSIGPENFIKMKTFMKNLVSKSQIGGDRVQIG
VVQFSDINKEEFQLNRYMSQGEISDAIDRMAHIGETTLTGSALTFVSQYFSPAKGARPNV
RKFLILITDGEAQDTVKDPAVALRQEGIIIYSVGVFGSNVTQLEEISGRPEMVFYVENFD
ILQHIEDDLVFGICSPHEECKRIEVLDVVFVIDSSGSIDRDEYNIMKDFMIDLVKKADVG
KNHVRFGALKYADDPEVLFYLDNLGTKREVISVLQNDQPMGGNTYTAEALGFSDHMFTEA
RGSRLHKGVPQVLIVITDGESHDADKLNATAKALRDKGILVLAVGIAGANPVELLAMAGS
SDKYFFVETFGGLKGIFSDVSASVCNSSKVDCEIEKVDLVFLMDGSNSIHPDDFKKMKKF
LASVVQDFDVSVNRVRIGAAQFSHTYRPEFPLGTFIGKKEISFQIENIQQIFGYTHIGSA
LRQVGHYFQPDMGSRINTGTPQVLLVLTDGQSQDEVAQAAEELRHRGINIYSVGIGDVDD
QQLVQITGTADKKLTVHNFDELKKVKKRIVRNICTSGGESNCFVDIVVGFDISTQQNGQN
LLEGQSWMETYLQDILRAIRSLSGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSESIL
NSLKDVTVKRPSLLNANLLSSLWGAFQNKSAARGKVVLLFSDGLDDDVEKLEQKSDELRK
EGLNALITVALDGATNSNDLADLLYIEFGKGFEYRTQLTLGMRDLGSRLSKHLVSVAERT
CCCLFCKCIGGDGTVGDPGPAGKKGPPGFKGSEGYLGEEGIAGERGATGPMGEQGTKGCY
GAKGPKGNRGLNGKEGEVGESGIDGLSGEQGENGLPGAKGEKGDEGAQGIPGERGIPGDH
GAKGLCGDPGVPGFDNSIEGPNGLKGEHGRQGRRGWPGPPGTPGSRRKTAVHGQRGHTGP
QGKTGIPGPDGLAGSLGLKGPQGPRGEAGMKGEKGGLGSKGPQGLPGPAGEAGSQGRVGS
QGNKGEPGDVGEKGAVGLWGPRGLPGDDGNPGYGSIGSKGAKGQEGFPGEIGPKGEVGDP
GGPGETGPKGTRGKMVSAGLPGEPGSPGELGPPGRKGVKGAKGLPSFSTCELIQHVQDHS
PGRHGAPRCPVHPTELVFALDQSRGITEPEFTLMKEMMTSLLSGLRVRENHCPAGARVAV
LTYDSHTRLLIRFSDAYRKDRLLREIKALPYEQSTSSRDIGKAMRFVSRNVFKRMLPGAH
ARRIATFFSGGPSADAQTITTAGLEFSALDIIPVVITFGQVPTIERSLVIDDTGRFQVIM
VPHRIDSSPALEGLQRCTFCYDVCKPDASCDQARPPAVQSYMDAAFLLDGSRHMGSAEFE
DIRGFLGALLDHFDITPEPETSVTGDRVALLSHAPPHFLPNTQRSPVRSEFNLTTYKSKR
LMKRHVEESVQQLNGDAFIGHALQWTLNNVFLSTPNLRRNKVIFVISAGETSHLDRETLK
KESLRAKCQGYALFVFSLGPSWNDQELEDLASYPLDHHLVQLGRIHKPDHRYGVKFVKAF
ISSVRRAINKYPPINIKAKCYKLSSADLRQPTRQLRSFLPGPQKATLKEDVLQKAKFFQH
KKYLSRIARGSRDDTVQNFTRNTSHTFKSGKGVIKTAPKQHDKGARRV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgctcactttgctccttatgataatttgttcccatgtttctgtcaaccaa
cattctggccctgagtatgccgatgtggtgtttctggtggacagctctgaccacgtggga
attaaatccttcccgtttgtaaagacattcatcaacaaaatgatcaccagcctccccata
gaggcccacaagtaccgtgtgggcctggcccagtacagcgatgggctccacagagaattc
cagctcagcaccttcaagagcagaggccccatgttgaaccacctcaagaagaacttcagg
ttcctgggtggctccctgaggattggtaagactctccaggaggtacacacaacctacttc
tcaaacgggagggacaggagacagtttcctccgatcctggtggtcctggcttcagccgag
tctgaggatgccgtggaagaggcctccaaggcgctgcgcaacgacggggtgaggatcatc
tccgtgggtatgcagggggcgtccgaggagaccctgaaggccatggccacaggccagttc
cactacagcctccggacggtccgagacctcagcacgttctcccaaaacatgacgcagatt
ctcaaggatgcggctcagtacaaggaaggagcagtcaatgacattcttgtggaagtttgc
caaggcccttctgtggcagatgttgtgttcctgttggatatgtccatcagcggcagctgg
gaggactttgactatcttaaagaattcctggaagaaagtgtatctgctctggacatcaag
gaaaactgcatgagggttggccttgtggcctatagcaatgagacaaaggtgattaaccca
ctgagcagtggcataaacaagtcggaggttctccaggatatacagagcctctctccccag
gctgggaaggcctacactggagctgccttgagaaagatcaggaaggaggtcttcagcgtg
cagcacggcagtcggaagaatcagggggtgccacagatagctgtgctggtgacccacagc
ccgtctgaggacaacgtgaccaaggctgctgtgaacctccggcgccagggcgtgaccatc
ttcaccatgggcatagacggggccagcgacgcccagctggagaagatcgcgtctcaccct
gccaagcagtacatctccaaactgaaaaccttctccgacctggctgcccacaaccagacg
tttctaaagaaactgcggaaccagatcacacacacagtctctgtcatttccgaaaggact
gaaaccctcaaatctggttgtgtggacactgaggaagcagacatctatctgctcatcgat
ggctctgggagcacccaggccacggacttccaggaaatgaagaccttcctgtcggaggtt
gtagggatgttcaacatcgctccccagaaggtgcgagttggggctgtccagtatgctgac
cgctgggacttggaatttgagatcagtaaatacaccaacaagcatgatgtgggaaaggcc
atcgagaacatcaggcagctgggcgggaacacaaacacaggcgcagccttgaacttcacc
ctggggctgctgcagaaagcaaagaggcagcgggaaaacagagtgccaagccaccttgtt
gtcctgaccaacggtgtgtcccaggacagcatcttggggcccgcaaacagactgagagag
gagctcatccacgtctatgccattggggtcaaggaggccaacgagacacagctgcgagaa
atcgcaggcgaggagaagcgggtgtactatgtgcatgactttgatgccttgaaagacata
agaaaccaggttgttcaagaaatctgtgccgaagaagcctgcaaagagatgaaggccgac
atcatgtttctggtggacagttctggcagtataggacctgaaaacttcatcaaaatgaaa
acatttatgaaaaacctggtgagcaaatctcagattgggggagatagggtgcaaatcggt
gtagtccagttcagtgacatcaataaggaggagtttcagctcaacagatatatgtcccag
ggggaaatttcagatgcaatagaccgaatggctcacattggagaaactaccttgaccggt
agcgccctgaccttcgtgtctcagtacttcagccctgccaagggggcccggcccaacgtc
aggaagttcctcattctcatcacggacggtgaggctcaggacacagtcaaggacccagca
gtggcacttcggcaagaaggcataattatctactctgtgggggtgtttggctccaatgtc
acccagcttgaggagatcagtgggaggccggagatggttttttatgttgagaattttgac
attctgcaacacattgaagacgaccttgtttttggaatatgcagcccccatgaagaatgc
aagcgcattgaagttttagatgtcgtgtttgtaattgacagctctggcagcattgaccgt
gatgagtataatatcatgaaggacttcatgattgacttggtgaaaaaagctgatgtgggc
aagaatcacgtccggtttggggctctgaagtatgcagatgacccagaggtgctgttttat
ctggataaccttggcacaaaacgggaggtgatctcggtgcttcaaaatgaccagcccatg
gggggcaacacttacaccgccgaggccctgggcttctcagaccacatgttcactgaagcc
cggggcagccgcctgcacaagggggtcccccaggtcctcatcgtaatcaccgatggggaa
tcccatgatgctgataagctcaatgccacagccaaggccttacgggacaagggcatcctt
gtcctggccgtggggatcgctggtgccaaccccgtggagctgctggccatggcaggatca
agtgacaagtacttctttgtggaaacttttggaggcctgaaggggatattttcagatgtg
tccgccagtgtgtgtaactcttcaaaagtagattgtgaaattgaaaaagtagacctcgtg
ttcctcatggatggttcgaatagcattcatccagatgacttcaagaagatgaagaaattc
ttggcatctgtcgttcaagacttcgatgtcagtgtcaacagagtgcgtataggagctgcc
cagttcagccacacctaccggccggagtttccactgggaactttcatcggcaaaaaggag
atctcctttcagattgaaaacatccagcagatctttggatacacgcacattggctctgct
ctccggcaggtagggcactacttccagccggacatgggcagccggatcaacacaggtacc
ccgcaggtgctgctggtcctcacagatggccagtcccaagacgaagtggctcaggccgct
gaagagctgagacacagagggatcaacatttactccgtgggcatcggggatgtggatgac
cagcagctcgttcagatcaccgggaccgccgataaaaaactgacagttcacaactttgac
gaactgaaaaaggtcaagaagaggatcgttcgcaacatctgtacctcggggggtgagagc
aattgctttgtggacattgtggtgggatttgacatctcaactcagcagaatgggcagaat
ttgcttgaaggtcagtcttggatggaaacttaccttcaagacatcttacgtgccatcagg
tccctcagtggggtaagctgtgaggtgggcacggagactcaggttagtgtggcttttcaa
gtgaccaatgccatggaaaaatattcccccaagtttgagatctacagtgaaagcatactg
aacagcttgaaggatgtaacagttaaaagaccatctcttctcaacgcaaacctcttgagt
tctctgtggggtgcatttcagaataaatcagctgctcggggaaaggtggttctcttattt
tcagatggattggatgatgatgttgaaaaacttgaacaaaaatctgatgaacttagaaaa
gaaggcctgaatgccctcatcacagttgctctggatggagccaccaattccaatgacctg
gctgaccttctctacattgaatttgggaaaggatttgaatacaggacacagctcactctt
gggatgagggatcttgggagccgactgtcaaagcacctggtcagtgttgcagaaaggaca
tgctgctgtttattctgcaagtgcattggaggagatggcacagtgggagaccctggacca
gcagggaaaaagggacccccaggttttaaaggcagtgaaggctacctgggagaggagggc
attgctggggaaagaggagccaccggaccaatgggagagcaaggtactaaaggatgctat
ggtgccaaaggtcctaagggaaacaggggactaaatggaaaggagggagaagttggggaa
agtggaattgatgggttaagtggagaacagggtgaaaatggtcttccaggagcaaaagga
gaaaaaggagatgaaggagcccagggaatcccaggagagagagggattcctggtgaccat
ggagcaaagggcctgtgcggagaccctggagttcctggatttgacaatagcatagaagga
cccaatggcttgaaaggggaacacggaagacagggaagaagaggctggccaggcccccct
ggaaccccaggctccagaagaaaaacagcagttcatggccagaggggacatacaggccca
caggggaaaacaggcatcccaggcccagatggacttgcagggtcactgggacttaagggt
cctcagggcccaagaggagaggctggtatgaaaggagaaaaaggaggcctgggaagtaaa
ggtccccaggggcttccaggaccagcaggagaggcagggagtcaaggccgtgtgggaagc
caaggaaataaaggagaacctggcgatgtgggagaaaagggagccgttggcctttggggt
cctcgaggcttgccgggtgatgatggtaacccaggttatggtagtattggaagtaaagga
gcaaaggggcaagaaggattccctggagaaattggacctaagggtgaggttggggaccct
ggtggtccaggagaaactggacccaagggcactagaggcaagatggtgtctgctgggctt
ccaggagagccgggatcccctggggagctgggacctcctggacgcaagggtgtgaaaggg
gccaaaggattgccttccttctccacatgtgagctcatccagcatgtgcaggaccacagt
cctggcagacatggagccccgcggtgccctgtgcatcccacggagctggtgttcgcgctg
gaccagtcccggggcatcacggagccagagttcacactgatgaaggagatgatgacctcc
ctgttgagcggtctccgggtccgggagaaccactgccctgcgggcgcgcgcgtggccgtg
ctcacctacgattcccacaccaggctcctcatccgcttctccgacgcctacaggaaggac
agactcctcagagaaatcaaggcccttccttacgagcagtccacatccagcagggacatt
ggcaaggccatgaggtttgtctccaggaatgtcttcaagcggatgctcccaggggctcac
gccagaagaatcgccacgttcttcagtggcggcccatctgcggatgcccagaccatcacg
acggccggcctggagttcagcgccctggacatcatcccggtggtgatcacctttggccag
gtgcccaccatcgagcgctcgcttgtgattgacgacactggcagattccaagtcatcatg
gttccacacaggattgactcttcaccagcactagagggactccagcggtgcactttctgc
tacgatgtctgcaagccggatgcttcttgcgaccaagccagaccaccagctgtgcaatct
tacatggacgctgctttccttctggatggctcccggcacatgggaagtgcagaatttgaa
gacataagaggcttcctgggagcactgttagatcactttgacatcaccccagagcctgag
acctctgtcactggagaccgggtggccctattaagccatgctcccccccacttcctaccc
aacactcagaggagtcccgttagaagtgaattcaaccttaccacctacaagagtaaacgc
ctcatgaagaggcacgtggaagaatcagttcagcagctcaatggagatgcttttattggt
catgccttacagtggactctgaacaatgtcttcttgagtacacccaatctgagaagaaat
aaagtcatttttgtgatatctgctggggaaaccagtcacttggatagggaaaccttaaag
aaagaatccttgagagccaagtgccaaggttatgccttatttgtgttttcccttggccct
tcttggaacgaccaggaactggaagatctagccagctaccctttggatcaccacttggtc
cagcttggccgcattcataagcctgaccacagatatggtgtgaagtttgtgaaggccttt
ataagctcagtcaggcgtgcaatcaacaaatatccaccaataaacatcaaagcaaagtgc
tacaaactcagctctgcagatctgcggcagcccacgcgccagttgcgaagcttccttcct
ggaccacagaaagctaccctcaaagaagatgtattacagaaggcaaaattctttcaacat
aaaaaatatctgtcaagaatagcaagaggcagcagagatgatactgttcaaaattttacg
agaaacacatcccatacctttaaaagtgggaaaggagtgataaaaacggctcccaaacaa
catgataaaggtgctcgaagagtttag
DBGET
integrated database retrieval system
