Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112402508
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Entry
112402508 CDS
T08872
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112402508 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112402508 (CLP1)
Enzymes [BR:
nasi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
112402508 (CLP1)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
112402508 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
TniB
ATP_bind_1
MMR_HSR1
AAA_22
AAA_16
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
112402508
NCBI-ProteinID:
XP_024605268
UniProt:
A0A341BTW5
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MVIGGKKKYEARHSSHTKKMGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGM
AEIFGTELTRNKKFTFDAGAKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALE
QMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPG
TMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRA
SVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPK
SGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPL
GMSQEDNQLKLVPVSPGRDMVHHLLSVSSAEGTEENLSETSVAGFIVVTSVDLEHQVFTV
LSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcggaggtaagaagaagtatgaagcaaggcacagcagccacacaaaaaagatg
ggagaggaggccaatgatgacaagaagccaaccactaaatttgaactagagcgagaaaca
gaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctcgctggcatg
gcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggtgcc
aaggtggctgttttcacttggcacggctgttctctacagctcagtggccgcaccgaggtg
gcttatgtctccaaggacacccctatgttgctttatctcaacactcatacagccttggag
cagatgcggaggcaggcggagaaggaagaagagcgagggccccgggtgatggtagtgggc
cccactgacgtgggcaagtccacagtgtgccgtctgctgctcaactatgcagtgcgtttg
ggccgccggcccacttacgtggagttggatgtgggccagggctctgtgtccatccctggt
accatgggggccctctacattgagcggccagcagatgttgaagagggattctctatccag
gcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttataat
aagattacatctcgtttagcagatgtgttcaaccaaaggtgtgaagtgaaccgaagggcc
tctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccaagca
ctggtgcatgcagcctccgcctttgaggtggacgtagttgtggttctggatcaagaacga
ctgtacaatgaactgaaacgggacctacctcactttgtacgcaccgtgctgctccctaaa
tccgggggcgtggttgagcgctccaaggacttccggcgggaatgtagggatgagcgtatc
cgcgagtatttctatggattccggggctgtttctatccccacgccttcaatgtcaaattt
tcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtctgcctttg
ggcatgtctcaggaggacaatcagctcaagctagtgcccgtcagccctggccgagacatg
gtgcaccacctcctgagtgtcagctctgctgagggcacagaggagaacctttcagagacc
agtgtggccggcttcatcgtggtgaccagtgtggacctagagcatcaggtgtttactgtt
ctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccggttc
atggatcttaagtag
DBGET
integrated database retrieval system
