Nicotiana attenuata (coyote tobacco): 109223533
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Entry
109223533 CDS
T05870
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109223533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nau03009
]
109223533
Ribosome biogenesis [BR:
nau03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109223533
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
109223533
NCBI-ProteinID:
XP_019243440
UniProt:
A0A1J6J127
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Position
3:36583484..36589046
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AA seq
319 aa
AA seq
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MFFDGYGYHGTSFEQTYRCYPASFIDKPQIENGDKIIMPPSALDRLASLHIDYPMLFELR
NAATDRVSHCGVLEFIAEEGMIYMPYWMMENLLLQEGDTVRVKNVTLPKGKYVKLQPHTK
DFLDISNPKAILETTLRNFSCLTTGDSIMVAYNNKKYYIDIVESKPSNAISIIETDCEVD
FAPPLDYKEPERPVPSLPSKTPAEGEEAAAEEEPKFNPFTGSARRLDGKPLKQQPPPVST
SGSKDKRPDMANATGQSAAGSSSQSSNRQTQGKLVFGSNANRNPDKQKEPVKEPVKEEPQ
KKEEPKFQAFTGKKYSLRG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgttttttgacgggtatggatatcatggaacatcatttgagcaaacataccgatgctac
ccagcgtcattcattgataagccgcagatagagaatggtgacaaaattataatgcctcct
tctgcccttgatcggctagcatcacttcacattgattacccaatgttgtttgagcttcga
aatgctgctacagaccgtgtttctcactgtggggttctggagtttattgcggaagagggc
atgatatatatgccttactggatgatggagaatttactactacaagaaggtgacacagta
agagtaaaaaatgtaactcttcccaagggaaaatatgtcaagttgcaaccacacacgaag
gatttcttggatatttctaacccgaaggccatcttggagacgacactgagaaatttttct
tgcttaaccactggagatagtattatggtggcttacaacaataaaaagtattacatagac
atagttgagtcgaagccctctaatgcaataagcatcattgagacagactgcgaagtagac
tttgcacctcctcttgattataaagaacctgaaagaccagttccatctcttccaagcaag
actccagctgaaggtgaagaggctgccgcagaggaggagccgaaattcaacccttttact
ggttcagcaagacgattggatgggaaacctctgaaacagcaacctccacctgtttccaca
tctgggtctaaagacaagcgacctgatatggcaaatgctactggacagtcagctgccggt
tcaagctctcaaagctccaatcgtcagacacaggggaagcttgtctttgggtcaaatgca
aaccggaatccagataaacaaaaggaacccgtgaaggaacccgtgaaggaggaacctcaa
aagaaagaagagccaaagtttcaagctttcactgggaagaagtactccttgaggggttaa
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