Nicotiana attenuata (coyote tobacco): 109225375
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Entry
109225375 CDS
T05870
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03030
DNA replication
nau03410
Base excision repair
nau03420
Nucleotide excision repair
nau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109225375
03410 Base excision repair
109225375
03420 Nucleotide excision repair
109225375
03430 Mismatch repair
109225375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nau03032
]
109225375
03036 Chromosome and associated proteins [BR:
nau03036
]
109225375
03400 DNA repair and recombination proteins [BR:
nau03400
]
109225375
DNA replication proteins [BR:
nau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109225375
DNA Replication Termination Factors
ELG1-RFC complex
109225375
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
109225375
DNA repair and recombination proteins [BR:
nau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109225375
Check point factors
HRAD17(Rad24)-RFC complex
109225375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
Rad17
RuvB_N
AAA_11
AAA_16
Mg_chelatase
nSTAND3
AAA_14
AAA_assoc_2
AAA_5
AAA_24
SLFN-g3_helicase
ResIII
AAA_2
AAA_18
PhoH
AAA_19
AAA_7
AAA_28
DNA_pol3_delta
AAA_30
DUF3853
AAA_25
RNA_helicase
Parvo_NS1
bpMoxR
TIP49
DUF815
IstB_IS21
ATPase_2
NB-ARC
DUF840
Motif
Other DBs
NCBI-GeneID:
109225375
NCBI-ProteinID:
XP_019245557
LinkDB
All DBs
Position
5:15113411..15119879
Genome browser
AA seq
341 aa
AA seq
DB search
MAPVVQSSQPWVEKYRPRQVKDVAHQDEVVRVLTNTLETSNCPHMLFYGPPGTGKTTTAL
AIAHQLFGPEMYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSSRQGGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMGS
RILHICREEGLSLDSEALSTLSSISQGDLRRAITYLQSAARLFGSSISARDLISVSGVIP
NDVTRAIFSACRSGNFDLANKEVDDVIAEGYPVSQMLSQLYDIVIDADDISDEQKARICK
KFAEADKCLVDGADEYLQLLDVASTTMQALTNMPQDMACES
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagttgtgcaaagctctcagccatgggtcgagaaatatcgaccgaggcaagtg
aaggacgtagcacaccaggatgaggtcgttcgagtcctcaccaacactctcgagacctct
aattgcccgcatatgttgttttatggccctcctggaactgggaaaacgacaactgctctc
gccattgcccatcagcttttcggacccgagatgtataagtcgagggtattggagctaaat
gccagtgatgaccgtggtatcaatgtagtccgcacaaaaattaagaactttgctgctgtt
gctgtaggttctagtcggcaaggtggttatccctgtccaccttttaagatcataatcctt
gatgaagcggattcaatgactgaagatgctcaaaatgccttgcgacgcactatggagaca
tattcaaaagttacaagattcttcttcatttgcaattacatcagcaggatcatagagcca
ctcgcttccagatgtgcgaagtttagattcaagccgcttacagaagaaataatgggcagc
cgaatattgcatatttgtagagaggaaggtcttagtctagattcagaggctctttcgact
ctcagttccatttctcaaggtgatctacgaagggctataacatacttacaaagtgctgct
cggttatttggatcttccatatcggcaagggacctaattagtgtgtcgggggtcatccca
aatgatgttacccgggccatattctcagcttgcagaagtggcaattttgacttggcaaac
aaagaagtggacgatgtcattgcagaaggatatcctgtttctcagatgctgtctcagttg
tatgatatagtaattgatgcggacgacatttctgatgagcagaaagcaagaatatgcaag
aaatttgctgaagcagacaagtgtcttgttgatggagcagatgagtatttgcaacttctg
gatgttgcaagcaccacaatgcaagcacttaccaacatgccacaggacatggcatgtgaa
agttag
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