Nicotiana attenuata (coyote tobacco): 109231136
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Entry
109231136 CDS
T05870
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nau03036
]
109231136
Chromosome and associated proteins [BR:
nau03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
109231136
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
Motif
Other DBs
NCBI-GeneID:
109231136
NCBI-ProteinID:
XP_019252245
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All DBs
Position
1:100504678..100526891
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AA seq
877 aa
AA seq
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MNYEQRLIAASKFVYAGDSADDSLPVNTVDLGVKATLKPHQIEGVSWLIRRYRLGVNVIL
GDEMGLGKTLQAISLLSYLKFFLKTPGPFLVLCPLSVTDGWMSEMANFAPKLRVLSYIGE
KEHRRNLRKKMYEHVNKKVLCDAEPLSFDVLLTTYDILLLDEDFLSQVPWSYAIIDEAQR
LKNPSSVLHNVLKERFLMPRKLLMTGTPIQNNLTELWALLHFCMPSVFGTLDQFLYAFKE
AGDPSCRDADKAKEQFKILKYVIGAFMLRRTKSQLIELGTLVLPPLTEITVMAPLAALQK
KVYMSILRKELTQLLALASGAPSTRSLQNIVIQLRKACSHPYLFAGIEPEPYEEGEHLVQ
ASGKLLIVDHLLQKLHAHGHRVLLFAQMTQTLDILQDYLELRKYSYERLDGSIRAEERFA
AIRSFSQQSAKRSSKLEADQNGAFVFLISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQA
LQRAHRIGQTNHVLSINLVTEQTVEEVIMRRAQRKLQLSQNIVGDDVLDQEGKEMAGAEA
GDLQSVILGLHMLDPAEITNEESDEFDRTELTAMAETIIAFRNEERSAKDEFEVKPVDRL
SEFNVVTKRGPESIKLDPRLDEASYLAWVEKFKEASQANHGPIFELGNRRRLPEEKHVKT
EAAKRKEEEEKLSKWEALGYHSLSVRYPVSAPDTDISSDSGVVHFVYGDCTYPSKVSPSE
PTIIFSCVDTSGSWGHGGMFDALARLSSSVPAAYERASEFHDLHLGDLHLIEITEDLTSG
SGSPHAPQWVALAVVQSYNPRRKVPRGSISIPDLEHCLSKASYSAAQKSASIHMPRIGYQ
DGSDRSEWYTIERLLRKHAALYGINIFVYYFRRSAQS
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgaattacgagcagagactaatcgccgcatcgaagttcgtctacgccggcgactcagcc
gacgattctctgccggtcaacactgttgacttgggagttaaagcgactcttaaacctcac
caaattgaaggagtctcatggcttattcgaagataccgtctaggcgtcaacgtcattctc
ggggacgagatggggttagggaagactttgcaagctatatcattgctgagctatctgaaa
ttcttcctaaagactcctggaccattcttggtgctctgtcctcttagtgtgacggatggt
tggatgtctgaaatggccaatttcgccccaaaattaagagtactatcctatattggagaa
aaggagcaccggcgcaatctacgtaagaaaatgtatgagcatgtgaacaagaaggtgttg
tgtgatgcagaaccactgtcttttgatgtgctgttgactacatacgacatattattactt
gatgaagattttctatcccaggttccatggagttatgcaataattgacgaagcacaaagg
ctcaaaaatccatctagtgtactgcataatgtgctcaaagagcgttttcttatgcctagg
aaattgctgatgaccggcacacctatacaaaacaaccttacagagctttgggctctgttg
catttttgtatgccttcagtttttggaacactggatcagtttctctatgcattcaaggaa
gctggcgatccttcatgccgtgatgcagacaaagctaaggaacaattcaaaattttgaaa
tatgtaataggggcatttatgctccgaagaactaaatctcagcttattgagttggggact
cttgtgctgccacctcttactgagattactgtgatggcaccattggcggccctgcaaaag
aaggtatatatgtccatattaaggaaggagctaacgcagctgctagcacttgcttctgga
gcacccagtactcggtcgttacagaatattgtaattcaactacgaaaagcatgtagtcat
ccttacctttttgctggtatagaacctgaaccatatgaagagggagaacacctggttcag
gctagcgggaaattgctcattgtggatcatcttcttcaaaagcttcatgctcatggacat
agagtccttctgtttgctcagatgactcaaacactggatatattgcaggattatctggaa
ttgaggaaatattcttacgagcgtcttgacggttcaattcgtgcagaagagcgcttcgct
gcaataaggagcttcagtcaacagtcagccaagcgaagctcaaagttggaagctgatcaa
aatggagcatttgttttcttgatttcaacaagagctggtggagttggattgaatcttgtg
gctgctgatactgtcatattttatgagcaagactggaatccccaggtagacaggcaggcc
ttgcagcgtgctcaccgaattggtcaaacaaaccatgtgttatctataaatttagtcacg
gagcagacggtcgaggaggtcattatgcgtagagcacaacggaagttacagcttagccag
aatattgtaggagatgatgtcttggatcaggaagggaaagagatggcaggagctgaagct
ggtgacttgcaatctgttatacttggattgcatatgctagatcctgcagagataaccaat
gaggaatcagatgaatttgataggactgagttgactgcaatggcagaaacaattattgca
tttcgcaatgaagaacgttctgccaaagatgagtttgaggtaaagccagttgacaggtta
agcgagttcaatgttgtcacaaaaagaggtccagaatctattaagcttgatcctcgtctt
gatgaagcttcatatctcgcgtgggttgagaaattcaaggaagcatcacaggccaaccat
ggtccgatttttgagctgggcaatagaagaaggttgcctgaagaaaagcatgtaaaaact
gaagctgcaaagagaaaggaagaggaggagaagttgtcaaagtgggaagctcttggatac
cactcattatctgtcagatatcctgtatcagctcctgatactgatatctcctcagattcc
ggcgttgttcattttgtttatggggactgcacttatccttctaaagtgtctccatcagag
ccgaccattatattcagctgcgttgatacatccggaagctggggtcatgggggtatgttt
gatgcattggcgagattatcatctagtgtacccgctgcatatgagcgagcttctgaattt
catgatcttcatctaggtgatctccatcttatagagattacagaggatctcactagtggc
agtggttcacctcatgctcctcaatgggtagctttggctgttgtgcagtcctacaatcct
aggcgcaaagtcccacgtggcagtatctccatccctgacttggagcattgtctatcaaaa
gcatcatattcagctgctcaaaagtctgcatcaatccacatgccaagaattggttatcag
gatggttctgacaggtcagaatggtatacaattgaacgtctgctgcggaagcatgctgct
ctctacggcataaatatctttgtgtattatttccggcgttcagcacagagctaa
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