KEGG   Nicotiana attenuata (coyote tobacco): 109231280
Entry
109231280         CDS       T05870                                 
Name
(RefSeq) DNA excision repair protein ERCC-1
  KO
K10849  DNA excision repair protein ERCC-1
Organism
nau  Nicotiana attenuata (coyote tobacco)
Pathway
nau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    109231280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nau03400]
    109231280
DNA repair and recombination proteins [BR:nau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     109231280
SSDB
Motif
Pfam: Rad10 HHH_5 HHH_2 HHH HRDC
Other DBs
NCBI-GeneID: 109231280
NCBI-ProteinID: XP_019252439
UniProt: A0A1J6IX52
LinkDB
Position
8:complement(38012732..38016025)
AA seq 387 aa
MEGEDREGGAEKKKSFVIQIPSYEEVMESSQPKTTPSSLFNPTPSFTQAFKFVKSSEFYS
PPPPPPPTQPSSSSPSPSQTANLRPTNNSDVPTSSSPSSTPSTSANRNAILVSHRQKGNP
LLKHIRNVRWAFADIVCDYLLGQNTCALYLSLRYHLLHPDYLYFRIRELQKNFRLRIVLC
HVDVEDVVKPLLEVTRTSLLHDCTLLCGWSLEECGRYLETVKVYENKPADLIQGQLDADY
LSRLNHALTTVRHVNKTDVVTLGSTFGSLSHVMDASMEDLSRCPGIGERKVKRLYDTFHE
PFKREVPNRQCVPETSVANESQPGSSSTREDEKEVGDTSNCEKKESELTVKSALSAAFAK
YSHKVARKKNKSQVEEEGKCSANEEAS
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggaaggcgaagatcgggaaggaggagcagagaagaagaagagctttgtgatacagata
ccttcttacgaagaagtaatggagagttctcagcccaaaacgacgccgtcttctctcttc
aaccctaccccttctttcactcaagccttcaaattcgtcaaaagctccgaattctactcg
cctcccccacctcctcctccgactcagccttcttcttcatccccttccccctcccaaacc
gccaatctcagaccaactaataattcagatgttccgacatcttcatcaccatcgtccacg
ccctcaacttcagctaatcgaaatgctatacttgtgagccatagacagaagggcaatccc
ttgctaaaacatatcaggaatgtgaggtgggcttttgcagatattgtttgtgactactta
ttgggacagaacacttgtgctctttatttaagcctccggtatcatctgcttcatccagac
tacttgtatttccggataagggaattgcagaagaactttaggctccgcatagttttgtgc
catgttgatgttgaagatgtggtcaagcctttacttgaagttaccagaacttcactcctt
catgattgcacgctgttatgtggttggagtttggaagaatgcggacgctacttggagacg
gtaaaggtttacgaaaacaagcccgccgatctcattcagggccaactggatgcggactac
ctatcacggctgaatcatgctctcacaacagtacgacatgttaacaaaacagatgttgtg
actcttggctcgacatttgggtctctttctcatgttatggatgcatctatggaagatctt
tctcgttgccctggcataggagagcgcaaggtaaaacgcctgtacgacacttttcatgaa
cctttcaagcgagaagtgccaaatcggcaatgtgttccggaaacttcagttgctaatgaa
tctcagcctggctccagcagcacaagggaagatgagaaggaggttggggatacaagcaat
tgcgagaagaaggaatccgaattaactgtcaagtcagcactttctgctgcttttgctaag
tactcacacaaagttgccagaaagaagaataaatcacaagtagaggaagaagggaaatgc
agtgctaatgaagaagcaagctaa

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