Natronoglycomyces albus: JQS30_12300
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Entry
JQS30_12300 CDS
T07203
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nav
Natronoglycomyces albus
Pathway
nav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JQS30_12300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nav03021
]
JQS30_12300
03400 DNA repair and recombination proteins [BR:
nav03400
]
JQS30_12300
Enzymes [BR:
nav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JQS30_12300
Transcription machinery [BR:
nav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JQS30_12300
DNA repair and recombination proteins [BR:
nav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JQS30_12300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QSB04549
UniProt:
A0A895XMB9
LinkDB
All DBs
Position
complement(2858335..2861766)
Genome browser
AA seq
1143 aa
AA seq
DB search
MAASRTGKTSFSKSKHAPRRLSFGRIDEQLEVPDLLALQTSSFDWLIGNDAYRQSAGDDA
KCGLDEILEEISPIEDFSGTMSLSFSNPRFDEVKAPIEECREKDLTYCAPLFVTAEFINH
TTGEIKSQTVFMGDFPMMTPKGTFIINGTERVVVSQLVRSPGVYFDKQPDKTSDRDLTSV
KVIPGRGAWLELDIDKRETVGVRIDRKRRQAVTVLLKAIGWTADQIREKFGWSELMMATL
EKDSINAQDEALLDIYRKLRPGEPPTKDNAQTLLDNLFFNPKRYDLAKVGRYKVNKKFEL
ELPISTGVLTEADLASTIEYMLRLHAGESGYDADDIDHFGNRRLRTVGELIQNQIRVGLS
RMERVVRERMTTQDVEAITPQTLINIRPVVAAIREFFGTSQLSQFMDQVNPIAGLTHRRR
LSALGPGGLARDRAGMDVRDVHPSHYGRMCPIETPEGPNIGLIGTMSTYARVNPFGFIET
PYRKIVDGVATDHVDYLTADEEDRLIIAQANTKLNPDGSLAEDEVLCRRRGGEFELVAQA
EVDYMDVSPRQMNSVATAMVPFLEHDDANRALMGANMQRQAVPLIKTDSPLVGTGMEYRA
AIDAGDVVIAEASGVVEDSSADYITIHQDDGYRRTYLLHKFRRSNAGTCINQIPLVTEGE
RVEAGQQIADGPCTDNGEMALGKNLLVAFMAWEGQNFEDAIILSNRLVEDDVLTSIHIDE
HEVDARDTKLGPEEITRDIPNVGEEMLSDLDERGIIRIGAEVQDGDILVGKVTPKGETEL
TPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIGVRTFNREDGDELSPGVNEMVRVYIA
QKRKISDGDKLAGRHGNKGVISKIVPAEDMPFLSDGTPVDIILNPLGVPGRMNIGQVLEV
HLGWAAKAGWKVENFDEQWQQALKDIDADTSEPGTKVATPIFDGSNPDEVQGLLESTLPN
RDGERMVGRSGKAKLFDGRTGEPFPSPISVGYMYILKLNHMVDDKIHARSTGPYSMITQQ
PLGGKAQFGGQRFGEMECWAMQAYGAAYALQELLTIKSDDVVGRVKVYEAVVKGENVPEP
GIPESFKVLLKELQSLCLNVEVLSSDGKSVQLTETDDEVFRAAEELGIDLSRDEPSSVDL
EGA
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttggcagcttcccgcactggcaagaccagcttcagcaaaagcaagcacgcacctcgccgt
ctgtcattcggcaggatcgatgagcaactggaagtcccggacctactggcgctacagacc
agttcgttcgactggctcatcggaaacgacgcttaccggcagtcagccggcgacgacgcc
aaatgtggtctggacgagatcctagaagagatcagcccgattgaagacttctcgggcacg
atgtccctgtccttctccaaccctcgcttcgacgaggtcaaggctcccatcgaggagtgc
cgcgagaaggacctcacttattgcgcgccgttgttcgttacggccgaattcatcaaccac
accacgggcgagatcaagagccagacggtcttcatgggtgatttccccatgatgacgccc
aagggaaccttcattatcaatggaaccgagcgagtcgtggtcagccagctcgtccggtcc
cccggcgtatatttcgacaagcagccggacaagacctccgaccgtgacttgacctcggtc
aaggtcattcccggtcgcggtgcctggctggaactggacatcgacaagcgtgaaactgtc
ggtgtccgcatcgaccgtaagcgtcgccaggccgtcaccgtcctgctcaaagccatcggc
tggaccgccgaccagatccgcgaaaagttcggctggtccgaactcatgatggccacgctg
gaaaaggactccatcaacgcccaagacgaggcgctgctggacatctatcgcaagctgcgc
ccaggtgagccgccgacgaaggacaacgcccagacgctgctggacaacctgttcttcaac
ccgaagcgctacgacttggccaaagtgggtcgttacaaggtcaacaagaagtttgagctt
gaactgcccatctccaccggagtactcaccgaagccgacctggcctcgaccatcgagtac
atgctgcgcctgcacgcgggcgagtccggatacgacgccgacgacatcgaccacttcggt
aaccgtcgtctgcgcaccgttggcgagctgattcaaaaccagatccgggtcggtctttcg
cgtatggagcgcgtcgtgcgcgagcgcatgacgacccaggacgtggaggcgatcactccg
cagacgctgatcaacatccgcccggtcgtggccgcgatccgcgagttcttcggaaccagc
cagctgtcgcagttcatggaccaggtcaacccgatcgccggtctgacccaccgtcggcga
ctctcggcgctgggacccggtggtctggcccgtgaccgcgctggcatggacgtgcgagac
gtgcacccgtctcactatggacgtatgtgcccgatcgagacgccggaaggtccgaacatc
ggactgatcggcaccatgtcgacgtatgcccgcgtgaacccgttcgggtttatcgagacg
ccttaccgcaagatcgttgacggcgtcgcgaccgaccacgtggactatctgaccgccgat
gaagaggaccgcctcatcatcgcccaggcgaacacgaagctcaatcctgacggctcgctg
gccgaggacgaggtgctgtgtcgtcgtcggggtggagagttcgaactggtcgctcaggct
gaggtcgactacatggacgtctcgccgcggcagatgaactccgtggccaccgcgatggtg
ccgttcttggagcacgatgacgccaaccgtgcgctcatgggcgccaacatgcagcgtcag
gccgtgccgttgatcaagacggactcgccgttggtgggaaccggcatggagtaccgtgcc
gccatcgacgccggcgatgtcgttatcgccgaagccagcggtgtcgtcgaggactcctcg
gccgactacatcacgatccaccaggacgacggataccgccgtacctacctgctgcacaag
ttccgccgttccaacgccggtacctgtattaaccagatcccattggtcaccgagggggag
agggtcgaggccggtcagcagatcgccgacggtccttgtaccgacaacggtgaaatggcg
ctgggtaagaacctgttggtggcgttcatggcctgggagggtcagaactttgaagacgcc
atcatcttgtccaaccgtctggtcgaagatgacgtgctcacctcgattcacatcgatgag
cacgaggtcgatgcccgtgacaccaagctggggcccgaggagatcacccgcgatatcccc
aacgtcggcgaggaaatgctgtcggacttggacgagcgcggcatcatccgtatcggtgcc
gaggtccaagacggtgacattttggtcggtaaggtcacgcccaagggtgagaccgaactg
acgccggaggaacgactcctgcgtgcgatcttcggtgagaaggcccgcgaagtgcgcgac
acctctttgaaggtgccgcacggcgagtcgggaacggtcatcggagtgcgcaccttcaac
cgtgaggacggcgatgaactgtcccccggtgtcaacgagatggtgcgcgtctacatcgcc
cagaagcgcaagatctccgatggcgacaagctggccggacgtcacggcaacaagggtgtt
atctccaagatcgtcccagccgaggacatgccgttcctctcggacggcactcccgtcgac
atcatcctcaacccgctgggtgtgcctggccgtatgaacatcggtcaggtactggaagtc
caccttgggtgggccgccaaagccgggtggaaggtcgagaatttcgacgagcagtggcag
caggctcttaaggacattgacgccgacaccagcgaaccgggcaccaaggtcgccacgccg
atcttcgacgggtccaaccccgacgaggtgcagggtctgctggaaagcactctgcccaac
cgcgatggtgagcgcatggtgggacgctctggtaaggccaagttgttcgacggccgtacc
ggggagccgttccccagcccgatcagtgtgggttacatgtacatcttgaagctcaaccac
atggttgacgacaagattcacgcccggtccaccggtccgtactccatgatcacccagcag
ccgctgggcggtaaggctcagttcggtgggcagcgtttcggagaaatggaatgttgggcc
atgcaggcctatggcgcggcttacgcgctacaggagctgttgaccatcaagtccgacgac
gtggtcggccgcgtcaaggtctacgaagcggttgtgaagggcgagaacgttcccgaaccc
ggtatccctgagtcgttcaaggtgctgttgaaggaactgcagtcgctgtgcctcaatgtc
gaggttttgtcctccgacggtaagtcggtacagctgaccgaaaccgacgacgaagtattc
cgtgcagccgaagagctcggcatcgacctgtcgagggatgaaccctccagcgtcgatctc
gaaggagcttaa
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