Neisseria bacilliformis: H3L91_02345
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Entry
H3L91_02345 CDS
T06984
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
nbc
Neisseria bacilliformis
Pathway
nbc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nbc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H3L91_02345 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nbc03021
]
H3L91_02345 (rpoB)
03400 DNA repair and recombination proteins [BR:
nbc03400
]
H3L91_02345 (rpoB)
Enzymes [BR:
nbc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H3L91_02345 (rpoB)
Transcription machinery [BR:
nbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H3L91_02345 (rpoB)
DNA repair and recombination proteins [BR:
nbc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H3L91_02345 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
QMT47994
LinkDB
All DBs
Position
461900..466096
Genome browser
AA seq
1398 aa
AA seq
DB search
MTYSFTEKKRIRKSFAKRENVLEVPFLLATQLDSYAKFLQQEKAYDKREDEGLQAAFNSI
FPIVSHNGYARLEFVHYVLGEPLFDIPECQLRGITYAAPLRARIRLVILDKESSKQDVVK
EVRENEVYMGEIPLMTPSGSFIINGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSAR
IIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALGYTNEQILDTFYDKETFYLLKD
GVRTDLVAGRLKGETAKLDIVDKNGNVLVAAGKRINAKHIRDIEKAGLKHLPVEADALVG
KVLARDVVAEDTGEVLALANDEITEELLAQFDINGVKEIHTLYINDLDQGGYISATLRTD
ETNGQHAARIAIYRMMRPGEPPTDEAVELLFNRLFFNEDSYDLSRVGRMKFNTRTYEQKL
SEEQKNSWYGRLLNETFAGAAEKGGFVLNVEDIVASIATLVELRNGHGEVDDIDHLGNRR
VRSVGELAENQFRSGLSRVERAVKERLNQAESENLMPTDLINAKPVSAAIKEFFGSSQLS
QFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLI
NSLSVYARTNEYGFLETPYRRVVNGKVTDEIEYLSAIEEGRFVIAQANAALDSKGRLTDD
LVTCREKGETIMATVDRVQYMDVATGQAVSVAASLIPFLEHDDANRALMGANMQRQAVPC
LRAEKPMVGTGIERDVAVDSATAIVARRGGVVEYVDANRVVVRVHDDEAVAGEVGVDIYN
LVKFTRSNQSTNINQRPAVKAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNY
EDSILISEKVAADDRYTSIHIEELNVVARDTKLGAEDITRDIPNLSERMQSRLDESGIVY
IGAEVEAGDVLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQ
VFTREGIQRDKRAQSIIDAELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLA
KGSEITAEYLASLPSKHDWFDVRVADENIAKQMELIKSSLQDKREEAESLFEIKKKKMTQ
GDELQPGVQKMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVL
NPLGVPSRMNIGQILEVHLGWAAKGIGERIGRMLDEKRKVREIRKFLDTMYNGNLGGPDR
HKEDLSQLSDAEILTLAQNLRNGATFASPVFDGAHESEIKAFLELAYPSDDPEVQKLGFN
DTKTQITLYDGRSGEPFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQ
FGGQRFGEMEVWALEAYGASYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFN
VLVKEIRSLGLDIDLERY
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgacttattcttttaccgagaaaaagcgtatccgtaaaagttttgccaagcgtgaaaac
gtattggaagtgccttttttgctggccacccagcttgattcttatgccaaatttctgcaa
caggaaaaagcctacgacaaacgcgaagacgaaggtttgcaggcggcattcaattcgatt
tttcctattgtgagtcataacggttatgcgcgtttagaatttgtccactacgttttgggt
gagccgctgtttgatattcccgaatgtcagttgcgcggtattacttatgctgctcctttg
cgtgcgcgtatccgcttggtgattttagataaggaatccagcaagcaggacgtggttaag
gaagtgcgtgaaaacgaggtctatatgggagaaatcccgttgatgacgcccagcggttct
ttcattatcaatggcaccgagcgcgttatcgtttcgcagctccatcgctcgccgggtgtt
ttcttcgagcatgacaggggtaaaacgcactcttcgggaaaactgctgttctccgcccgc
atcattccttaccgtggttcttggttggattttgaatttgatccgaaagatttgctgtat
ttccgcattgaccgccgccgaaaaatgccggtaaccattctgttgaaggcgctgggctat
accaacgaacaaatcttggacactttttacgataaagaaaccttttatctgttgaaggac
ggtgtgcgtaccgatttggtggcaggccgtctgaaaggcgagactgccaagttggacatt
gtcgataaaaacggcaatgttttggtggcagcaggcaagcgcatcaatgccaaacatatc
cgcgatattgaaaaagccggattgaagcacctgcctgttgaggcggatgctttggtcggt
aaagttcttgcacgggatgtggtggcggaagatacaggggaagtattggctcttgccaat
gatgagattaccgaggaattgctggctcagtttgatatcaacggagtgaaagaaatccac
acgttgtacatcaatgatttggaccaaggcggctatatttcggctactttgcgcaccgat
gaaaccaacgggcagcatgctgcacgtattgccatctaccgtatgatgcgcccgggcgag
ccgcctaccgacgaggcagttgagttgctgtttaaccggctgtttttcaacgaagacagc
tatgatttgtcgcgcgtcggacgtatgaaattcaacacccgtacctacgaacagaagttg
agtgaggaacagaaaaactcgtggtatggccgcttgttgaatgaaactttcgccggtgct
gccgaaaagggcggtttcgtgctgaatgtggaggacatcgtggcttccatcgctactttg
gttgaattgcgtaacggacacggcgaagtggacgatatcgaccatttgggcaaccgccgc
gtgcgttcggttggcgaattggcggaaaaccagttccgaagcggcctttcccgtgtcgaa
cgcgcagtgaaagaacgtttgaaccaagccgaatcggaaaacctgatgcctactgatctg
attaacgccaaaccggtttctgcggccattaaggaatttttcggttcaagccagctctcg
cagtttatggatcagaccaatcctttgtcggaaatcacccacaaacgccgtgtctccgcg
ctcggtccgggcggtttgacccgcgaacgcgccggctttgaagtacgcgacgtgcacccg
acccactatggccgcgtttgcccgattgaaacaccggaaggcccgaacatcggcctgatc
aactcgctctcggtttacgcgcgcaccaacgaatacggctttttggaaacgccgtaccgc
cgtgtggtaaacggcaaagtaaccgacgaaatcgaatatctctctgcgattgaagaaggc
cgttttgtgattgcgcaggccaacgccgcattagacagcaaaggccgtctgaccgacgat
ttggtaacctgccgcgaaaaaggcgaaaccatcatggccacggttgaccgcgtgcagtat
atggacgtggcgacaggtcaggcggtatcggttgccgcctccctgattcccttcctcgaa
cacgacgacgccaaccgcgcgctgatgggtgcgaacatgcagcgtcaggccgtgccctgt
ctgcgtgcggaaaaaccgatggtgggtaccggcatcgaacgcgatgtagcggtagacagc
gcgacagccattgttgcccgtcgtggcggcgtggtcgaatatgtcgatgccaaccgcgta
gtggtgcgtgtgcacgacgacgaggctgtggccggcgaagtgggcgtggacatctacaat
ctggtgaaattcacccgctccaaccaatccaccaacatcaaccagcgtccggccgtgaaa
gcgggcgatgtgttgcaacgcggcgacttggtggctgacggcgcatccaccgatttgggc
gaactggctctgggtcagaacatgaccatcgcctttatgccttggaacggttacaactac
gaagactcgattctgatctccgaaaaagtggccgccgacgaccgctacacctccatccat
atcgaagagctgaacgttgtcgcccgcgacaccaaactcggtgccgaagacattacccgc
gacattcccaacctgtccgagcgcatgcaaagccgtttggacgaatccggcatcgtttac
atcggtgcggaagtggaagcaggcgatgtgctggtgggcaaggtaacgcccaaaggcgaa
acccagcttacccccgaagaaaaactgctgcgcgctatcttcggcgaaaaagcctccgat
gtgaaagacacttcgctgcgcatgcccaccggcatgagcggaaccgtgatcgacgtgcag
gtgttcacccgcgaaggcattcagcgcgacaaacgcgcccagtccattatcgatgctgaa
ctcaaacgttaccgccttgatttgaacgaccaactgcgcattttcgacaacgacgcattc
gaccgtatcgaacgcatgattgtcggccaaaaagccaacggcggcccgatgaagctggcc
aaaggcagcgaaattactgccgaatacctggccagcctgccgagcaagcacgactggttc
gacgtgcgcgtggccgatgaaaacatcgccaagcagatggaactgatcaaaagcagcctg
caagacaagcgcgaagaagccgaaagcctgtttgaaatcaagaaaaagaaaatgacccag
ggcgacgagttgcagccgggcgtgcagaaaatggtcaaagtcttcatcgccatcaaacgc
cgtttgcaggcgggcgacaaaatggccggccgccacggcaacaaaggcgtggtatcgcgc
atcctgccggtggaagacatgccctacatggcggacggacgtcccgtggacatcgtgctc
aacccgctgggcgtaccctcgcgcatgaacatcggccagattctcgaagtacatttgggc
tgggcggccaaaggcataggcgagcgcatcgggcgcatgctcgatgagaaacgcaaggtc
agggaaatccgcaaattcctcgacaccatgtacaacggtaacctcggcggtcccgaccgg
cacaaggaagacctgtcgcagctttccgacgcggaaatcctcactctggcgcaaaacctg
cgcaacggcgcaacctttgcctcgccggtgttcgacggcgcgcacgagagcgaaatcaaa
gccttcctcgaactggcctaccccagcgacgaccccgaagtgcagaaactcggtttcaac
gacaccaaaacccagattacgctctacgacggccgctcgggcgagcctttcgaccgcaaa
gtaaccgtcggcgtgatgcactatctgaaactgcaccatttggtagatgaaaaaatgcac
gcccgctccaccggcccctactcgctcgttacccagcagcccctgggcggcaaagcccaa
ttcggcggccagcgtttcggcgaaatggaggtttgggcgttggaggcttacggcgcgtcc
tacaccttgcaggaaatgctcaccgtgaaatccgacgacgtgaacggccgcaccaaaatg
tacgaaaacatcgtcaaaggcgaacacaaaatcgatgccggtatgcccgaatccttcaac
gtactggtcaaagaaatccgttcgctgggcttggacatcgacttggaacgttactga
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