Nocardioidaceae bacterium TYQ2: KLP28_16150
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Entry
KLP28_16150 CDS
T08881
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nbt
Nocardioidaceae bacterium TYQ2
Brite
KEGG Orthology (KO) [BR:
nbt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nbt03051
]
KLP28_16150 (pafA)
Enzymes [BR:
nbt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KLP28_16150 (pafA)
Proteasome [BR:
nbt03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KLP28_16150 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Selenoprotein_S
Motif
Other DBs
NCBI-ProteinID:
QWC85036
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All DBs
Position
3364977..3366338
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AA seq
453 aa
AA seq
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MDRRIFGIENEYGVTCTFRGQRRLSPDEVARYLFRKVVSWGRSSNVFLGNGSRLYLDVGS
HPEYATPECDDIGELVAHDKAGERILEGLVADAEKRLADEGVNGDVYLFKNNTDSAGNSY
GCHENYLVSREGEFSRLADVLIPFLVTRQIICGAGKVVQTPRGATYAVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTMLKVATCDLVLRMIEEGVVM
RDLTLENPIRAIREIASDMTGRRTVRLANGREASALDLQREYHAKAAAFADRRGLEDPVV
RRALELWDRTLTALETDDLGLVEREIDWVIKWRLIDRYRHQHDLQLSNPRIAQLDLAYHD
INRRRGLYYLLEKRGAVARTATDLQIFRAKTVPPQTTRARLRGDFIKRAQERRRDFTVDW
VHLKLNDQAQRTVLCKDPFRATDERVARLVESM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcatcttcgggatcgagaacgagtacggcgtgacctgcaccttccgtggt
cagcggcgcctgagtcccgacgaggtcgcgcgctacctcttccgcaaggtcgtgtcgtgg
ggccgcagctccaacgtgttcctcggcaacgggtcgcgcctctacctcgacgtcggctcg
caccccgagtacgcgacgccggagtgcgacgacatcggcgagctcgtggcccacgacaag
gccggcgagcgcatcctggagggcctggtggccgacgccgagaagcgtctggccgacgag
ggcgtcaacggtgacgtctacctgttcaagaacaacaccgactccgccggcaactcctac
ggctgccacgagaactacctcgtcagccgcgagggggagttctcccgactggccgacgtg
ctcatcccgttcctcgtgacccggcagatcatctgcggcgccggcaaggtcgtgcagacc
ccgcgcggggcgacgtacgcggtgtctcagcgcgccgagcacatctgggagggggtgtcc
tcggcgaccacgcgctcgcgcccgatcatcaacacccgcgacgaaccgcacgccgacgcc
gagcgctaccgccgcctccacgtcatcgtcggcgactccaacatgtcggagaccaccacg
atgctcaaggtcgcgacctgcgacctggtgctgcggatgatcgaggagggcgtcgtgatg
cgcgacctcaccctggagaacccgatccgggccatccgggagatcgcctcggacatgacc
ggccgtcgcaccgtgcggctcgccaacggacgcgaggcgagcgccctggacctgcagcgc
gagtaccacgccaaggccgccgccttcgccgaccgccgtggcctcgaggacccggtcgta
cgccgcgccctggagctgtgggaccgcaccctcaccgccctggagaccgacgacctcggc
ctcgtcgagcgcgagatcgactgggtgatcaagtggcggctgatcgaccgctaccgccac
cagcacgacctgcagctgtcgaacccccgcatcgcgcagctcgacctcgcctaccacgac
atcaaccggcgacgcgggttgtactacctgctcgagaagcgcggcgccgtcgcacgcacc
gcgaccgacctgcagatcttccgggccaagacggtgcccccgcagaccacgcgcgcccgg
ctgcgtggcgacttcatcaagcgcgcccaggagcgccgccgcgacttcaccgtcgactgg
gtgcacctgaagctcaacgaccaggctcagcgcaccgtgctgtgcaaggaccccttccgt
gccaccgacgaacgggtcgcacgactcgtggagagcatgtga
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