Sciurus carolinensis (gray squirrel): 124958647
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Entry
124958647 CDS
T08117
Name
(RefSeq) excitatory amino acid transporter 2 isoform X1
KO
K05613
solute carrier family 1 (glial high affinity glutamate transporter), member 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04082
Neuroactive ligand signaling
ncar04721
Synaptic vesicle cycle
ncar04724
Glutamatergic synapse
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
124958647
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
124958647
04721 Synaptic vesicle cycle
124958647
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124958647
05016 Huntington disease
124958647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124958647
Transporters [BR:
ncar02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
124958647
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Motif
Pfam:
SDF
BPD_transp_1_N
Motif
Other DBs
NCBI-GeneID:
124958647
NCBI-ProteinID:
XP_047372893
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Position
11:42558233..42704919
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AA seq
571 aa
AA seq
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MDHSANNMPKQVEVRMLDSHLSSEEPKHRSLGLRLCDKLGKNLLLTLTVFGVILGAVCGG
LLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMV
YYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDEVSSLDAFLDLIRNLFPENLVQ
ACFQQIQTVTKKVLVAPQSEEANATNAVISLLNETVTEAPEETKMVIKKGLEFKDGMNVL
GLIGFFIAFGIAMGKMGEQAKLMVEFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAI
KDLEVVARQLGMYMVTVIVGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTAS
SAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVILDGG
QIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNV
VGDSFGAGIVYHLSKSELDTIDSQHRVHEDIEMTKTQSIYDDMKNHRESNSNQCVYAAHN
SVIVDECKVTLATNGKSADCSVEEEPWKREK
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaccacagtgccaacaacatgcccaagcaggtggaagtacggatgcttgacagccac
ctcagctcagaggagccgaagcaccgatccctgggcctgcgcttgtgcgacaagctgggg
aagaatctcctgctcacactgacggtgttcggcgtcatcctgggggccgtgtgcgggggg
ctgctccgcctggcgtctcccatccaccctgatgtggtcatgctgatagcgttcccaggg
gatatcctcatgaggatgctcaaaatgctcattctccctctcatcatctccagtttaatc
acagggttgtcagggctggacgctaaagccagcgggcgcttaggcacgagggccatggtg
tactacatgtccacaaccatcatcgccgcggtgctgggggtcatcctggtcttggccatc
caccctggcaaccccaaactcaagaagcagctggggcccgggaagaagaacgacgaggtg
tccagtctggatgccttcctggatcttattcggaatctcttccctgaaaatctggtccaa
gcctgtttccaacagattcaaacagtgacaaagaaagtgctagtggcccctcagtcagag
gaggcgaatgcaaccaacgcggtcatctccctgttgaacgagactgtgacggaggctccc
gaggagactaagatggttatcaaaaagggcctggagttcaaggatgggatgaatgtctta
ggtctgatagggtttttcattgcctttggcatcgccatggggaagatgggtgagcaggcc
aagctgatggtggagttcttcaacattttgaacgagatcgtaatgaaattagtgatcatg
atcatgtggtactctcccctgggtatcgcctgcctaatctgtgggaagatcattgcaatc
aaggacttagaagtggttgctaggcaactggggatgtacatggtaacagtgatcgtgggc
ctcatcatccacgggggcatctttctccctttgatttactttgtagtgaccaggaaaaac
ccgttctccttttttgctggcattttccaagcttggatcactgccttgggcactgcttcc
agtgctggaactctgcctgtcaccttccgttgcctagaagaaaatctagggattgataag
cgcgtgaccagatttgtcctcccagttggagcaaccattaacatggatggtacagccctt
tatgaagcagtggccgccatctttattgcccaaatgaatggtgtcattctggatggaggc
cagatcgtgactgtgagcctcacagccaccctggcgagtgtgggcgcagccagtatcccc
agcgccgggctggtcaccatgctcctcattctgacagctgtgggcctgccgacagaagac
atcagcctgctggtggctgtggactggctgctggacaggatgagaacttcagtcaatgtc
gtgggtgactcttttggggctgggattgtctatcacctctccaagtctgagctggataca
attgactcccaacaccgagtgcatgaagacattgaaatgaccaagactcaatccatttac
gatgacatgaagaaccacagggaaagcaactctaaccaatgtgtctatgctgcacacaac
tctgtcatagtagatgagtgcaaggtaactctggcaaccaatggaaagtcagctgactgc
agtgttgaggaagagccctggaaacgtgaaaaataa
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