Sciurus carolinensis (gray squirrel): 124966051
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Entry
124966051 CDS
T08117
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04022
cGMP-PKG signaling pathway
ncar04024
cAMP signaling pathway
ncar04740
Olfactory transduction
ncar04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
124966051
04022 cGMP-PKG signaling pathway
124966051
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124966051
04740 Olfactory transduction
124966051
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124966051
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124966051
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
124966051
NCBI-ProteinID:
XP_047383113
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Position
16:26251508..26323889
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AA seq
1251 aa
AA seq
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MLGWVQKVLPQPPGTPQKIKMEEEEEEEEAELESELELEPEPLEEPVDEEPVTAAASSLE
ALQAQVAEFPDVNSPSGWVLTWLRKGMEKVVPQPACSSRAAPTAAGTEAPAQAGAQILGH
CGTGNAGSSDGPSEAPRDQDAKPSPWLLRWLEQNLEKVLPQPPKPPKGWTAEPVDAALDP
EPPEPPLETEPTPQVPESTCVPHPEEEPAPEPQPSFQASALPPPGDSAGLLAWLLHRLEK
ALPQPVLRGKTGEQEPGFPEMCDVQTSKCRIGAEVLLEMAKLPLGFPRLPIPLQESHRTS
APARRRWRRFQLARRRTRPWWRCPAAVSCWIAVCWCGRVWTRAEEAGSRPRRPHSRSFRR
RQRPPAQQSPGSHLCPRPSGSSTMAKPGQDMELNRLVQDQPPDQVAPRPAPPNLAEHLPN
VPSYRPPITRIPVLVTRRTALSNSSFAKETRSSIRRLVPATKDHPEVQVEDTEANSCPLI
VEEKAPEQLPPSPAKSDTLTVPGTAPGAHRKKLPSHEDEEEELKALSPAESPVVAWSDPT
TPQEADGQDRAASTASQNSAIINDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSP
AKKAPEPAPAAKPPEAEQVEEEHYCDMLCCKFKRRPWKKYKFPQSIDPLTNLMYILWLFF
VVLAWNWNCWLIPVRWAFPYQTPDNIHLWLLMDYLCDLIYLLDIVVFQIRLQFVRGGDII
MDKKEMRNNYLKSRRFKMDLLCLLPLDFLYLKFGLNPLLRFPRCLKYMAFFEFNNRLEAI
LSKAYVYRVIRTTTYLLYSLHVNSCLYYWASAYQGIGSTHWVYDGVGNSYIRCYYWAVKT
LITIGGLPDPQTLFEIVFQLLNYFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTVK
YMNFYRIPRSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRLDLAIDVNYDIVSKVAL
FQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTL
KAGSVFGEISLLAIGGGNRRTANVVAHGFTNLFILDKKDLNEILVHYPESQKLLRKKARR
MLRNNNRPKEEKSVLILPPRAGTPKLFNAALAAAGKMGGKGAKGGKLAHLRARLKELAAL
EAAARQQQLLEQAKNAQEATGEAGGAGSAAQDQTSAPSAASAPSAPGQPAPQEPPAPGSP
PLASPKKPEAGGEGAAGPEEHSLRISMSPGPDPGEQTLSVEMPEEKKEAAE
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggtccagaaggtgctgcctcagcccccgggaactcctcagaagatcaag
atggaggaggaagaggaggaggaagaagcagaactggagtcggagctggagctggaacca
gagccactggaagagcccgttgatgaggagccagtgactgcggctgcctcgagtcttgag
gccctccaggctcaggttgccgagtttcctgacgtgaacagtcccagcggttgggtgctg
acttggctcaggaagggcatggagaaggtggtaccacagcccgcctgcagcagcagggca
gcccccaccgctgccggcacagaggccccagctcaggccggagcacagatccttggacac
tgtggtactgggaacgcaggatcttcagatggacccagtgaggctcccagggaccaggac
gccaagcccagcccatggctactccggtggctggagcagaatctggagaaagtgctacct
cagcctcccaaaccccccaagggctggactgccgagcctgtagatgccgccttggaccca
gagcccccagaacccccgctggagacagagcccaccccgcaggtcccagagagcacctgc
gtgccccatcctgaggaggagccggctccagagccccagcccagcttccaggcctccgcc
ctgccaccacctggggactccgccgggttgctggcatggctcctgcacaggctggagaag
gccctgccgcagccggtgctccgtgggaaaactggggagcaggagcctggcttccctgag
atgtgtgacgtgcagaccagtaagtgccgcattggagctgaggtgctgctggagatggcc
aagcttcccctgggcttcccgagactcccgattcccctgcaggagtctcacaggacctca
gcgccagcccgcaggagatggagacggttccagcttgcgaggaggagaacaaggccgtgg
tggagatgcccagccgcagtgtcctgctggatagctgtttgctggtgcgggcgagtgtgg
accagagcagaggaggcgggaagccgcccccgaaggcctcattccaggagcttccggagg
aggcagaggccaccagctcagcagtccccagggtcacacctctgcccgcgaccttccggc
tccagcaccatggcaaagccaggccaggacatggagctgaatcgcctggtccaggaccag
ccacctgaccaggtggcccccaggcctgcacccccaaacctggcagagcacctccctaat
gtgcccagctaccgccccccaatcacccgcatccctgtcctcgtcacccggagaacggcc
ttgtccaattccagcttcgccaaggagaccaggagttccatccgtcgcctagtgcctgcc
acaaaagatcacccagaggtgcaggtggaagacaccgaggcaaacagctgccccctcatc
gtggaggagaaggcccccgagcagctgccaccttcgcctgccaaatccgacaccctcacg
gtccctggcacggccccaggggcccacaggaagaaactgccctctcacgaggatgaggaa
gaagaactcaaggccctgtctccagctgagtccccagtggtggcctggtcagaccccacc
actccacaggaggccgatggccaggaccgggcagcctccacggccagccagaatagcgcc
atcatcaacgatcggctccaggagctggtaaagctcttcaaggagcggacggagaaggtg
aaggagaagctcatcgaccccgatgtcacctccgacgaggagagccccaagccctcccca
gccaagaaagccccagagccagccccagccgcgaagcccccggaagccgagcaggtggag
gaggaacactattgtgacatgctttgctgcaagttcaagcggcgcccctggaagaagtac
aagttcccccagagcatcgatccactgaccaacctcatgtacatcctgtggctgttcttc
gtggtgctggcctggaactggaactgctggctgatccctgtgcgctgggccttcccctac
cagacgccggacaacatccacctctggctgctgatggattacctgtgcgacctcatctac
ctcctggacatcgttgtgttccagatacgcctgcagttcgtccgagggggcgacatcatt
atggacaaaaaggagatgcgaaataactacctgaagtcccgccgatttaagatggacctg
ctctgcctcctgcccttggacttcctctacttgaaattcggcctgaaccccctcctccgc
tttccccgctgtttaaagtacatggccttcttcgagtttaacaaccgcctggaagccatc
ctcagcaaggcctacgtgtacagggtcatcaggaccacgacctacttgctctacagcctg
cacgtgaactcctgcctctactactgggcttcggcctatcagggcatcggctccactcac
tgggtttacgatggcgtgggcaacagttacattcgctgctattactgggccgtgaagacc
ctcatcaccatcggggggctgcccgacccccagacgctctttgaaattgtcttccagctc
ctgaattacttcacgggtgtcttcgctttctctgtgatgattggacagatgagagacgtg
gtcggggcggccacggcaggacagacctactaccgcagctgcatggacagcacggtgaag
tacatgaacttctacaggatccccaggtccgtgcagaaccgcgtcaagacctggtacgag
tacacctggcactcgcaaggcatgctggatgagtcggagctgatggtgcagcttccagac
aagatgcgactggacctcgccatcgatgtgaactacgacatagttagcaaggtggcgctc
ttccagggctgcgaccggcagatgatcttcgacatgctgaagaggctccgctcggtggtg
tacctgcccaacgactacgtgtgcaagaagggggagatcggcagggagatgtacatcatc
caggccgggcaggtgcaggttctgggaggccctgacgggaagtctgtgctggtgaccctg
aaagccggatccgtgtttggagagataagcttgctggccatcgggggcgggaaccggcgc
acggccaacgtggtggcccacgggttcaccaacctcttcattctggacaagaaggacttg
aatgaaattttggtgcattatcctgaatctcagaagctactccggaagaaggccaggcgc
atgctgagaaacaacaacaggcccaaggaggagaagagtgtgctcatcctgcccccgcgg
gcggggaccccgaagctcttcaacgcggccctggctgcggcggggaagatgggaggcaag
ggagccaaagggggcaagctggcccacctccgggcccggctcaaggagctggctgcgctg
gaggctgcggccaggcagcagcagctgctggagcaggccaagaacgcacaagaagccacc
ggagaggcgggcggggcaggctctgcggctcaggaccagacctccgccccctcagccgcc
tctgcgccctcggcccctggccagcctgcgccccaggagcccccggcaccgggctctccg
ccgcttgcttcccccaagaagcccgaggcaggcggggagggagcggccgggcccgaggag
cactcgttgcggatcagcatgagccctgggcccgatccaggcgagcagaccctgtcggtg
gagatgcccgaggagaagaaggaggcggcggagtga
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