Sciurus carolinensis (gray squirrel): 124967255
Help
Entry
124967255 CDS
T08117
Name
(RefSeq) cadherin-5-like
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecule (CAM) interaction
ncar04520
Adherens junction
ncar04670
Leukocyte transendothelial migration
ncar05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124967255
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124967255
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
124967255
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
124967255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124967255
04090 CD molecules [BR:
ncar04090
]
124967255
Cell adhesion molecules [BR:
ncar04515
]
Cadherins
Major cadherins
124967255
CD molecules [BR:
ncar04090
]
Proteins
124967255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
Cadherin_3
Stevor
Motif
Other DBs
NCBI-GeneID:
124967255
NCBI-ProteinID:
XP_047385322
LinkDB
All DBs
Position
16:complement(18721618..18760429)
Genome browser
AA seq
784 aa
AA seq
DB search
MQVLTMLVAALGAYLGLLVAAAVAGSDPTQPDTPGMLPIHQRQKRDWIWNQMHIDEEKNT
SLPHHVGKIKSSVNRKNAKYVLRGESAGKVFRVDAETGDVYAFERLDREKVSEYQLIALI
VDKDTNRNLEPPSSFTVKVHDVNDNWPVFTRRLFNASVPEMSAVGTSVMHVTAVDADDPT
VSDHATVMYQVLKGEENFAIDNSGFIFTTTNNLDREKQARYEIVVEARDAQGLRGESGTT
TVLITLQDVNDNFPIFTQTKYTFTVPEDIRVGSPVGSLFVNDPDEPQNRMTKYSIVQGEY
RDTFTIETDPTRNEGIIKPMKPLDYELIQQYVFTIEATDPTINLRYLSGISGRNKARVII
NITDVDEPPVFQQLYYHFQLWENQKKPLIGSVTAVDPDKARRSIGYSIRRTSDKGQFFRI
TKQGGIYNEKELDRETYPWYNLTVEAKELDSSGIPTGKESIVQVHIEVLDENDNAPMFAQ
PYEPKVCENVAPGKLVVQISAIDKDITPRNVKFRYTLSTEDSNFTLTDNHDNTANVTVKY
GQFDREQAKVHYLPILISDNGKPSLTSTNMLTVAVCKCNEWGEFTFCEEAAAQMGVSIQA
LVAIFLCILTITVITLLIFLRRRLRKQARAHSKSVPEIHEQLVTYDEEGGGEMDTTSYDV
SVLNSVRHGGAKPPQPALDAQPAVYTQVKKPPRLGPGAHGGPGEMATMIEVKKDEADQDG
GGPPYDTLHIYGYEGSESIAESLSSLGTDSSDSDIDYDFLNDWGPRFKMLAELYGSDPRE
ELVY
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgctcacaatgctggtcgctgctttaggggcctaccttggcctgctggtggca
gcagcagtggcaggctctgaccccacccaacctgacactcccggcatgctgccgatccac
cagcgccagaagagagactggatttggaaccagatgcacattgatgaagagaaaaatacc
tcattaccccaccatgtgggcaagatcaagtctagtgtgaaccgcaagaacgccaagtat
gtgctcagaggagaatctgctggcaaggtcttccgggtcgatgcagagacaggggatgtg
tatgcttttgagagactggaccgggagaaagtctccgaataccagctcattgccctcatt
gtagacaaggacaccaacagaaacctggaacctccttccagcttcactgtcaaagttcat
gatgtaaatgacaactggcctgtgttcacacgccggttgttcaacgcatctgtgcctgag
atgtcagctgtgggaacttcggtcatgcatgtgacagcagtggatgcagatgaccccact
gtgtcagaccatgccaccgtcatgtaccaagtcctgaaaggggaagagaattttgccatc
gataattctggattcattttcaccacaaccaacaacttggaccgagagaagcaggccagg
tacgagatcgtggtggaggcacgagatgcccagggcctccggggagaatcaggcaccacc
accgtgctaatcactctgcaagatgtcaacgacaacttccccatcttcactcagaccaag
tacacctttacggtgcctgaagacatccgtgtgggcagccctgtgggttctctgtttgtc
aatgacccagacgagcctcagaacaggatgaccaagtacagcattgtgcagggcgaatac
agggacaccttcaccatcgagacggatcctacccgcaatgagggcatcatcaaacccatg
aagccgctggactacgagctcatccagcagtacgtgttcaccatcgaggccacagacccc
accatcaacctccgatacctgagcggcatctccggcagaaacaaagcccgggtcatcatc
aacatcacggacgtggacgagccccccgtcttccagcagctctactaccacttccagctg
tgggaaaaccagaagaaacctctgatcggctccgtgacggccgtagatcccgacaaggcc
cggcgcagcattggatactccatccgcaggaccagtgacaaaggccaattcttccgcata
accaagcagggaggcatttacaatgagaaagaactggacagagaaacctacccctggtat
aacctgactgtggaggccaaagaactggattctagtgggatccccacaggtaaagaatcc
attgtgcaggtccacattgaagttttagatgagaatgacaacgccccaatgttcgcccag
ccctatgagcccaaagtgtgtgagaatgtggcccctggcaagctggttgtgcagatctct
gcaatagacaaggacataactccacggaatgtcaagttcagatacaccctgagcactgag
gacagcaacttcaccctcacggataatcatgataacacagccaatgtcacagtcaagtat
gggcagtttgaccgggaacaggccaaggtgcactacctgcccatacttatctcggacaat
gggaagccgagcctgaccagcaccaacatgctgaccgtggccgtgtgcaagtgcaatgag
tggggcgagttcaccttctgtgaggaggcagctgcccagatgggcgtcagcatccaggcg
ctggtagccatcttcctctgcatcctcaccatcacagtgatcactctgctcatcttcctg
cggaggcggctccggaagcaggcccgtgcccacagcaagagcgtgccagagatccacgag
cagctggtcacttacgacgaggagggcggcggcgagatggacaccaccagctatgacgtg
tcagtgctgaactcggtgcgccacggcggggccaagcccccgcagcctgcgctggacgcc
cagccggccgtctacacccaggtgaagaagccaccacggctggggcccggggcacacggc
gggcccggagagatggccaccatgatcgaggtgaagaaggacgaggcagaccaggatggc
ggcgggcccccctacgatacgctgcacatctatggctatgagggctccgagtccatcgcg
gagtcgctcagctccctgggcaccgactcctccgactcggatattgattacgacttcctc
aatgactggggccccaggttcaagatgctggcggagctctacggttcggacccccgtgag
gagctggtgtattag
DBGET
integrated database retrieval system
