Sciurus carolinensis (gray squirrel): 124972452
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Entry
124972452 CDS
T08117
Name
(RefSeq) transcription factor E3 isoform X1
KO
K09105
transcription factor E3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04137
Mitophagy - animal
ncar05202
Transcriptional misregulation in cancer
ncar05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124972452
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124972452
09162 Cancer: specific types
05211 Renal cell carcinoma
124972452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124972452
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
124972452
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
DUF3371
HLH
Motif
Other DBs
NCBI-GeneID:
124972452
NCBI-ProteinID:
XP_047392821
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All DBs
Position
X:complement(40446435..40458371)
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AA seq
575 aa
AA seq
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MSHAAEPARDGVEANAEGPRAVFVLLEERRPADSAQLLSLNSLLPESGIVADIELENILD
PDSFYELKSQPLPLRSSLPISLQATPTTPATLSTSSSAGGSRTPAMSSSSSSRVLLRQQL
MRAQAQEQERRERREQAAAAPFPSPAPASPAISVVGVSAGGHTLGRPPPAQVPREVLKVQ
THLENPTRYHLQQARRQQVKQYLSTTLGPKLASQALTPPPGPTSAQPLPAPEAAHATGPT
GSAPNSPMALLTIGSSSEKEIDDVIDEIISLESSYNDEMLSYLPGGTAGLQLPSTLPVSG
NLLDVYSNQGVATPAITVSNSCPAELPNIKREISETEAKALLKERQKKDNHNLIERRRRF
NINDRIKELGTLIPKSNDPEMRWNKGTILKASVDYIRKLQKEQQRSKDLESRQRSLEQAN
RSLQLRIQELELQAQIHGLPVPPTPGLLSLTTTSASDSLKPEQLDIEEEGRPGTATFHVA
GGPAQNASHQQPPAPPSDALLDLHFPSDHLGDLGDPFHLGLEDILMEEEEGVVGGLSGGA
LSPLRAASDPLLSSVSPAVSKASSRRSSFSMEEES
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatgcggccgagccagctcgggacggtgtagaggccaacgcggagggccctcga
gccgtgttcgtgctgttggaggagcgtaggccggccgattcggcccagctgctcagcctg
aactctttgcttccggaatccgggattgttgctgacattgaattagaaaacatccttgat
cctgacagcttctacgagctcaaaagccaacccctacccctacgctccagcctcccaata
tcactgcaagccacaccaaccaccccagctacactctctacatcgtcttctgcagggggc
tccaggacccctgccatgtcgtcatcttcttcatcccgggtcttgctgcggcaacaactc
atgcgggcccaggcacaggagcaggagaggcgtgagcgtcgggaacaggctgcagctgct
cccttccccagtcctgcacctgcctctcctgccatctctgtggttggcgtctctgctggg
ggccacacgttgggccgtccaccccctgctcaggtgcccagggaggtgctcaaggtacag
acccacctggagaacccaacgcgctaccacctgcagcaggcacgccggcagcaggtgaaa
cagtacctgtccactacacttgggcccaagctggcttcccaggccctcaccccaccacca
gggcccaccagtgcccagccgctgcctgcccctgaggctgcccacgccactggtcccaca
ggcagtgctcccaacagccccatggcgctgctcaccatcgggtccagctcagagaaggag
attgatgatgtcattgatgagatcatcagcctggagtccagttacaatgatgagatgctc
agctacctgcctggaggcaccgcagggctgcagctccccagcacgctgcctgtgtcaggg
aatctgcttgatgtgtacagtaatcagggtgtggccacgccagccatcactgtcagcaac
tcctgtccagctgagctgcccaacatcaaacgggagatctctgaaaccgaggcaaaggcc
ctattgaaggaacgccagaagaaagacaatcacaacctgattgagcgtcgcaggcgattc
aacattaacgataggatcaaggagttgggcaccctcattcccaagtccaatgacccggag
atgcgctggaacaagggcaccatcctgaaggcctctgtggattatattcgcaagttgcag
aaggagcaacagcgctccaaagacctggaaagtcgacagcgatccctagagcaagccaac
cgcagcctgcagctccgaattcaggagctagaactgcaggcccagatccatggtctgcca
gtgcctcccaccccagggctgctctccctaaccacgacttcagcctctgacagcctcaag
ccagagcagctggacattgaggaggagggcaggccaggcacagcaacatttcatgtagca
gggggacctgcccagaatgcttcccatcagcagcccccagcaccaccctcagatgctctt
ctggacctgcactttcccagtgaccacctgggggacctgggggaccccttccacctgggg
ctggaggacattctgatggaggaggaggaaggggtggtgggaggactatcggggggtgcc
ctgtccccactgagggctgcctctgaccccctgctttcttcagtatccccggctgtctca
aaggcaagcagccgacgcagcagcttcagcatggaggaagagtcctga
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