KEGG   Sciurus carolinensis (gray squirrel): 124977255
Entry
124977255         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-protein ligase E3A-like
  KO
K10587  ubiquitin-protein ligase E3 A [EC:2.3.2.26]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04120  Ubiquitin mediated proteolysis
ncar05165  Human papillomavirus infection
ncar05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124977255
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    124977255
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124977255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124977255
Enzymes [BR:ncar01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     124977255
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  HECT type E3
   124977255
SSDB
Motif
Pfam: HECT AZUL AIF-MLS
Other DBs
NCBI-GeneID: 124977255
NCBI-ProteinID: XP_047396650
EnsemblRapid: ENSSCRG00010020886
LinkDB
Position
2:complement(73621192..73719747)
AA seq 874 aa
MATACKRSPGEPQSDDIEASRMKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLR
MDNNAAAIKALELYKINAKLCDPHPSKKGASSAYLENSKGAPNNSXDKMNKKEGKGARID
FKDVTYLTEEIVYEILELCREREDYSPLIRVIGRVFSSAEALVQSFRKIKQHTKEELKSL
QGKDEDKDEDEKEKAACSAAAMEEDSEASSSRIGDSSQGDNNLQKLGPDDVSVDIDAIRR
VYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEY
LEMALPLFCKAMSKLPLAAQGKLIRLWSKYSADQIRRMMETFQQLITYKVISNEFNSRNL
VNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKK
GPRVDPLETELGVKTLDCRKPLISFEEFINEPLNDVLEMDKDYTFFKVETENKFSFMTCP
FILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLE
MIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWF
NPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQS
LKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYI
LNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYT
RDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSH
TCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggccacagcttgtaaaagatcaccaggagaacctcagtctgacgacattgaagctagc
cgaatgaagcgagcagctgcaaagcatctaatagaacgctactaccaccagttaactgag
ggctgtggaaatgaggcctgcacgaatgagttttgtgcttcctgtccaacttttctccgt
atggataacaatgcagcagctattaaagccctcgagctttataagattaatgcaaaactc
tgtgatcctcatccctccaagaaaggagcaagctcagcttaccttgagaactcgaaaggt
gcccctaacaactctngagataaaatgaacaagaaggaaggaaaaggagcaagaattgat
tttaaagatgtgacttatctaaccgaagaaatagtgtatgaaattcttgaattatgtaga
gagagagaggattattcccctttaattcgtgtcattggaagagttttctctagtgctgag
gcattggtacagagctttcgaaaaatcaaacaacacactaaggaagaactgaaatctctt
caaggaaaggatgaagataaggatgaagatgaaaaagaaaaagctgcatgctctgctgct
gctatggaagaagattcagaagcatcttcctcaaggataggcgatagctcacagggagac
aataatttacaaaaattaggcccagatgatgtgtctgtggatattgatgctattagaagg
gtctataccagattgctctctaatgaaaaaatagaaactgcctttctcaatgcacttgta
tatttgtcacctaacgtagaatgtgacttgacgtatcataacgtatactcccgagatcct
aattatctgaatttgttcattattgtaatggagaatagaaatctccacagtcctgaatat
ctggaaatggccttgccattattttgcaaagcaatgagcaagctaccccttgcagcccaa
gggaaactgataagactgtggtctaaatatagtgcagatcagattcggagaatgatggaa
acatttcagcaacttattacttacaaagtcataagcaatgaatttaacagtcgaaatcta
gtgaatgatgatgatgccattgttgctgcttcaaagtgcttgaaaatggtttactatgca
aatgtagtgggaggggaagtggacacaaatcataatgaggaagatgatgaagagcccatc
cctgagtccagtgaattgacacttcaggagcttttgggagaggaaagaagaaataagaaa
ggtcctcgagtggacccattggaaactgaacttggtgttaaaactctggattgtcgaaaa
ccacttatctcttttgaagagttcattaatgaaccactgaatgatgttctggaaatggat
aaagattatacctttttcaaagtagaaacagaaaacaagttttcttttatgacatgtccc
tttatattgaatgctgtcacaaagaatttgggattatattatgacaatagaatccgcatg
tacagtgaacgaagaatcactgttctctacagcctagttcaagggcagcagttgaatcca
tatttgagactgaaagtcagacgcgaccatatcatagatgatgcacttgttcggctagag
atgattgctatggaaaatcctgcagacttgaagaaacaattgtatgtggaatttgaagga
gaacaaggagttgatgagggtggtgtttccaaagaattttttcagctggttgtggaggag
atcttcaatccagatattggtatgttcacatatgatgaatctacaaaattattttggttt
aatccgtcctcttttgaaactgagggtcagtttactctgattggcatagtcctgggtctg
gctatttacaataactgtatactggatgtgcattttcccatggttgtctacaggaagctg
atggggaaaaaaggaacttttcgtgacttgggagactctcacccagttctatatcagagt
ttaaaagacttactagaatatgaagggaatgtggaagatgatatgatgatcactttccag
atatcacagacagatctttttggtaacccaatgatgtatgatctaaaggaaaatggtgat
aaaattcccattacaaatgaaaacaggaaggaatttgtcaatctctattctgactacatt
ctcaacaaatcagtagaaaaacagttcaaggcttttcgaagaggttttcatatggtgacc
aatgaatctcccttaaagtacttattcagaccagaagaaattgaattgctcatatgtgga
agccggaatctagacttccaagcactagaagaaactacagaatatgatggtggctatacc
cgggactctgttctgattagggagttctgggaaatcgttcattcatttacagatgaacag
aaaagactcttcttgcagtttacaacgggcacggacagagcacctgtgggaggactagga
aaattaaagatgattatagccaaaaatggcccagacacagaaaggttacctacatctcat
acttgctttaatgtccttttacttccggaatattcaagcaaagaaaaacttaaagagaga
ttgttgaaggccatcacgtatgccaaaggatttggcatgctgtaa

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