Sciurus carolinensis (gray squirrel): 124977255
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Entry
124977255 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-protein ligase E3A-like
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
ncar05165
Human papillomavirus infection
ncar05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124977255
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
124977255
09172 Infectious disease: viral
05165 Human papillomavirus infection
124977255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124977255
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124977255
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
HECT type E3
124977255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
AIF-MLS
Motif
Other DBs
NCBI-GeneID:
124977255
NCBI-ProteinID:
XP_047396650
EnsemblRapid:
ENSSCRG00010020886
LinkDB
All DBs
Position
2:complement(73621192..73719747)
Genome browser
AA seq
874 aa
AA seq
DB search
MATACKRSPGEPQSDDIEASRMKRAAAKHLIERYYHQLTEGCGNEACTNEFCASCPTFLR
MDNNAAAIKALELYKINAKLCDPHPSKKGASSAYLENSKGAPNNSXDKMNKKEGKGARID
FKDVTYLTEEIVYEILELCREREDYSPLIRVIGRVFSSAEALVQSFRKIKQHTKEELKSL
QGKDEDKDEDEKEKAACSAAAMEEDSEASSSRIGDSSQGDNNLQKLGPDDVSVDIDAIRR
VYTRLLSNEKIETAFLNALVYLSPNVECDLTYHNVYSRDPNYLNLFIIVMENRNLHSPEY
LEMALPLFCKAMSKLPLAAQGKLIRLWSKYSADQIRRMMETFQQLITYKVISNEFNSRNL
VNDDDAIVAASKCLKMVYYANVVGGEVDTNHNEEDDEEPIPESSELTLQELLGEERRNKK
GPRVDPLETELGVKTLDCRKPLISFEEFINEPLNDVLEMDKDYTFFKVETENKFSFMTCP
FILNAVTKNLGLYYDNRIRMYSERRITVLYSLVQGQQLNPYLRLKVRRDHIIDDALVRLE
MIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEEIFNPDIGMFTYDESTKLFWF
NPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVVYRKLMGKKGTFRDLGDSHPVLYQS
LKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLKENGDKIPITNENRKEFVNLYSDYI
LNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEETTEYDGGYT
RDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGLGKLKMIIAKNGPDTERLPTSH
TCFNVLLLPEYSSKEKLKERLLKAITYAKGFGML
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggccacagcttgtaaaagatcaccaggagaacctcagtctgacgacattgaagctagc
cgaatgaagcgagcagctgcaaagcatctaatagaacgctactaccaccagttaactgag
ggctgtggaaatgaggcctgcacgaatgagttttgtgcttcctgtccaacttttctccgt
atggataacaatgcagcagctattaaagccctcgagctttataagattaatgcaaaactc
tgtgatcctcatccctccaagaaaggagcaagctcagcttaccttgagaactcgaaaggt
gcccctaacaactctngagataaaatgaacaagaaggaaggaaaaggagcaagaattgat
tttaaagatgtgacttatctaaccgaagaaatagtgtatgaaattcttgaattatgtaga
gagagagaggattattcccctttaattcgtgtcattggaagagttttctctagtgctgag
gcattggtacagagctttcgaaaaatcaaacaacacactaaggaagaactgaaatctctt
caaggaaaggatgaagataaggatgaagatgaaaaagaaaaagctgcatgctctgctgct
gctatggaagaagattcagaagcatcttcctcaaggataggcgatagctcacagggagac
aataatttacaaaaattaggcccagatgatgtgtctgtggatattgatgctattagaagg
gtctataccagattgctctctaatgaaaaaatagaaactgcctttctcaatgcacttgta
tatttgtcacctaacgtagaatgtgacttgacgtatcataacgtatactcccgagatcct
aattatctgaatttgttcattattgtaatggagaatagaaatctccacagtcctgaatat
ctggaaatggccttgccattattttgcaaagcaatgagcaagctaccccttgcagcccaa
gggaaactgataagactgtggtctaaatatagtgcagatcagattcggagaatgatggaa
acatttcagcaacttattacttacaaagtcataagcaatgaatttaacagtcgaaatcta
gtgaatgatgatgatgccattgttgctgcttcaaagtgcttgaaaatggtttactatgca
aatgtagtgggaggggaagtggacacaaatcataatgaggaagatgatgaagagcccatc
cctgagtccagtgaattgacacttcaggagcttttgggagaggaaagaagaaataagaaa
ggtcctcgagtggacccattggaaactgaacttggtgttaaaactctggattgtcgaaaa
ccacttatctcttttgaagagttcattaatgaaccactgaatgatgttctggaaatggat
aaagattatacctttttcaaagtagaaacagaaaacaagttttcttttatgacatgtccc
tttatattgaatgctgtcacaaagaatttgggattatattatgacaatagaatccgcatg
tacagtgaacgaagaatcactgttctctacagcctagttcaagggcagcagttgaatcca
tatttgagactgaaagtcagacgcgaccatatcatagatgatgcacttgttcggctagag
atgattgctatggaaaatcctgcagacttgaagaaacaattgtatgtggaatttgaagga
gaacaaggagttgatgagggtggtgtttccaaagaattttttcagctggttgtggaggag
atcttcaatccagatattggtatgttcacatatgatgaatctacaaaattattttggttt
aatccgtcctcttttgaaactgagggtcagtttactctgattggcatagtcctgggtctg
gctatttacaataactgtatactggatgtgcattttcccatggttgtctacaggaagctg
atggggaaaaaaggaacttttcgtgacttgggagactctcacccagttctatatcagagt
ttaaaagacttactagaatatgaagggaatgtggaagatgatatgatgatcactttccag
atatcacagacagatctttttggtaacccaatgatgtatgatctaaaggaaaatggtgat
aaaattcccattacaaatgaaaacaggaaggaatttgtcaatctctattctgactacatt
ctcaacaaatcagtagaaaaacagttcaaggcttttcgaagaggttttcatatggtgacc
aatgaatctcccttaaagtacttattcagaccagaagaaattgaattgctcatatgtgga
agccggaatctagacttccaagcactagaagaaactacagaatatgatggtggctatacc
cgggactctgttctgattagggagttctgggaaatcgttcattcatttacagatgaacag
aaaagactcttcttgcagtttacaacgggcacggacagagcacctgtgggaggactagga
aaattaaagatgattatagccaaaaatggcccagacacagaaaggttacctacatctcat
acttgctttaatgtccttttacttccggaatattcaagcaaagaaaaacttaaagagaga
ttgttgaaggccatcacgtatgccaaaggatttggcatgctgtaa
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