Sciurus carolinensis (gray squirrel): 124988637
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Entry
124988637 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124988637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124988637
03036 Chromosome and associated proteins [BR:
ncar03036
]
124988637
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124988637
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
124988637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_2
Prok-RING_1
Chromo
DUF4537
PHD_ash2p_like
ASH2L-like_WH
Zn_ribbon_CLPX_N
C1_1
Motif
Other DBs
NCBI-GeneID:
124988637
NCBI-ProteinID:
XP_047414243
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All DBs
Position
7:complement(121217708..121221879)
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AA seq
576 aa
AA seq
DB search
MAQPPRLSRSGAPSLWDPASPAPTSGPRPRXWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHI
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCXGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGEVGNTFRYP
KGERSSKLLSALNSHKDRFISGREIKKRKCLFGLHARTPPPVEPPAGDGAPTSFPSGQGP
GGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRHQPESQEQRERARLQRALQASVS
PPPPSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDSEPQTELPSLP
RSPLELHIGFPTDTPKSAPHSMTASSSSVPAPSPGLPRRSAPSSPLCRSLSPGTGGGVRG
GVGYLSRGDPVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcccccccggctgagccgctctggtgccccctctctctgggacccagcttcc
cctgctcccacatcaggccccaggcctcgancttgggagggtcaagatgtgctggctaga
tggactgatgggttgctatacttgggcaccatcaagaaggtggacagtgctcgggaggtg
tgtctggtgcagtttgaggatgattcccagtttttggttctttggaaagacattagccct
gctgccctccctggggaggaactcctctgttgtgtctgccgttctgagactgtggtccct
gggaaccggctggtcagctgtgagaagtgtcgccacgcttatcaccaggactgccacatt
cccagggccccagcccctggagaaggagagggcacttcctgggtctgccgccagtgtgtc
tttgcaattgccaccaagcgggggggtgcactgaagaagggtccctatgctcgtgccatg
ctgggtatgaagctgtctctgccgtatggactaaaggggctggattgggacgctggacat
ctgagcaaccgacagcagagctactgttactgtggtggccctggggagtggaacctgaaa
atgctgcagtgccgaagctgcctgcagtggttccatgaggcctgcacccagtgtcttagc
aaacccctcctctacggggacaggttctatgaatttgaatgctgtgtgtgcncggggggc
cctgagaaggtccgcaggctacagcttcgttgggtggatgtggcccatcttgtcctctat
cacctcagtgtttgctgtaagaagaaatactttgattttgatcgtgagatcctccccttc
acttctgagaactgggacagtctgctcctgggggaggtaggaaatactttcagatacccc
aaaggagaacgttcttccaagcttctctctgctcttaacagccacaaggaccgtttcatt
tcaggaagggagattaagaagaggaaatgtttgtttgggcttcatgctcggactcctccc
cctgtggagccccctgctggagatggagcccccaccagcttcccttcagggcagggccct
gggggaggggtctcacgtcccctggggaagcgacggaggccggagccagagcccctgagg
aggaggcagaagggaaaagtggaggagctggggccaccctcagcagtgcgccatcagcca
gagtcccaggagcagagggagcgggctcgtctgcagagggcactgcaggcctcagtgtct
ccaccaccccccagccctaaccagagttaccagggcagcagcggctacaacttccggccc
accgatgcccgctgcctgcccagcagccccatccggatgttcgcttccttccacccttct
gccagcaccgcagggacctctggggacagtgaaccccagacagaattgccttctctccct
aggtcgcccctggaacttcacattggcttccccacagacacccctaaaagtgccccccac
tcgatgactgcctcatcttcctcagtcccagccccctccccaggtcttcctagacgctca
gcaccctcttctcccctgtgccgtagtttgtctcctgggactgggggaggagtccgaggt
ggggttggctacctgtctcgaggggaccctgtccgggtccttgctcggagagtacggcct
gatggctctgtgcagtacttggttgagtggggaggagggggcatcttctga
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