Sciurus carolinensis (gray squirrel): 124993255
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Entry
124993255 CDS
T08117
Name
(RefSeq) translation initiation factor eIF-2B subunit epsilon
KO
K03240
translation initiation factor eIF-2B subunit epsilon
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124993255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ncar03012
]
124993255
Translation factors [BR:
ncar03012
]
Eukaryotic type
Initiation factors
eIF-2B
124993255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LbH_EIF2B
W2
GMPPB_C
Hexapep
Hexapep_GlmU
LbH_GLGC
DUF4954
Fucose_pyrophosphorylase
Hexapep_2
Motif
Other DBs
NCBI-GeneID:
124993255
NCBI-ProteinID:
XP_047420932
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All DBs
Position
9:54341248..54349891
Genome browser
AA seq
722 aa
AA seq
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MAAAVVAAPGAPASRANKRGGGGPGGGGSGGVARAAEEEPPPPLQAVLVADSFNRRFFPI
SKDQPRVLLPLANVALIDYTLEFLTATGVQETFVFCCWKAAQIKEHLLKSKWCRPTSLNV
VRIITSELYRSLGDVLRDVDAKALVRSDFLLVYGDVISNINITRALEEHRLRRKLEKNVS
VMTMIFKESSPSHPTRCHEDNVVVAMDSATNRILHFQKTQGLRRFSFPLSLFQGSGDGVE
IRYDLLDCHISICSPQVAQLFTDNFDYQTRDDFVRGLLVNEEILGNQIHMHVTTREYGAR
VSNLHMYSAVCADVIRRWVYPLTPEANFTDSTTHSCTHSRHNIYRGPEVSLGHGSILEEN
VLLGSGTVIGSNCSITNSVIGPNCHIGDNVVLDQAYLWQGVRVADGAQIHQSLLCDNAEV
KEQVILKPRCVLTSQVVVGPDITLPEGSVISLHPPDAEEDEDDGQFSDDSGANQEKEKVK
LKGYNPAEVGVAGQGYLWKAADVNMEEEEELRQNLWGLKINMEEESETESERSMDSEELD
SRAGSPQLDDIKVFQNEVLGTLQRGKEENISCDNLVLEINSLKYAYNISLKEVMEVLSHV
VLELPLQQMDSPLDPNRYCVLLLPLLKAWSPVFRNYIKRAADHLEVLAAIEDFFLEHETL
GTSVAKVLMAFYQLEILAEETILTWFSKRDITDKGRQLRKNQQLQRFIQWLKEAEEESSE
DD
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggtggttgcggctcctggtgctccggccagtcgagctaacaagcgcggc
ggcggcgggccaggaggcggtggcagcggcggggtggccagagcggcagaggaggaaccg
ccgccgcccctacaagcggttttggtggccgatagcttcaaccgccgcttcttccctatc
tccaaagaccaacctcgggtcctcttgcccctggccaatgtggcattaattgactacact
ctggaattcctgactgccacaggtgtacaggaaacctttgtcttttgctgctggaaggct
gctcaaatcaaagaacatttactgaaatccaagtggtgccgccctacatccctcaatgtg
gttcgaataattacatcagagctatatcgatcactgggagatgtcctgcgtgatgttgat
gccaaggccttggtgcgctctgacttccttcttgtgtatggagatgtcatctcaaatatc
aatattaccagagccctagaggaacataggttgaggcggaaactagaaaaaaatgtatct
gtgatgacaatgatcttcaaggaatcctcccccagccacccaactcgttgccatgaggac
aatgtggtggtggctatggatagtgccacaaaccgaattctgcatttccagaagacccag
ggcctccggcgtttttcatttcctctgagcctgttccagggcagtggagatggagtagag
attcgatatgatttactggattgtcatatcagcatctgctctcctcaggtggctcaactc
ttcacagacaattttgactaccaaactcgagatgattttgtgcgaggcctgttagtgaat
gaagagatcctagggaaccagatccacatgcacgtaacaactagagaatatggtgctcgg
gtctctaacctacacatgtactcagctgtctgtgctgatgtcatccggcgatgggtctac
cctcttactccagaagccaacttcactgatagcaccacacacagctgcactcattcccga
cacaacatctaccgagggcctgaggtcagcctgggccatggcagcatcctggaggaaaat
gtgcttctgggctctggcactgtcattggcagcaattgctctatcaccaacagtgtcatt
ggccccaactgccacattggtgataacgtggtgctggaccaggcctacctgtggcagggt
gttcgagtagctgatggagcacagatacaccaatctctgctctgtgacaatgctgaggtc
aaggaacaagttatactgaagccacgttgtgtccttacttcccaggtggtagtgggccca
gatataacactaccggagggctcggtgatctctttgcaccctccagatgcagaagaagat
gaggatgatggccagttcagtgatgattctggagccaaccaagaaaaggagaaagtgaag
ctgaaaggttacaatccagcagaagtaggagttgcaggccagggctacctctggaaagct
gcagatgtgaacatggaggaagaggaggaactgaggcagaatctgtggggactcaagatc
aacatggaagaagagagtgaaactgaaagtgaacgaagtatggattctgaggagctggac
agtcgggcaggctcccctcagttggatgacatcaaagtattccagaatgaagtcttggga
acgttacagcgaggcaaagaagagaacatttcttgtgacaatctagtcctggagatcaac
tctctcaaatatgcctacaacataagcctgaaggaggtgatggaggtgttaagccacgtg
gtcctggagctccccctgcagcaaatggattccccacttgacccaaaccgatactgtgtc
ctgctgcttcctctgctcaaggcttggagtcctgtttttaggaactacataaagcgcgca
gctgaccatttggaagtgttggcagccatcgaggacttcttcctggagcatgaaactctt
ggtacttcagtggccaaggtactgatggctttctaccagctggagatcctggctgaggaa
acaatcctgacctggttcagcaaaagggacataactgacaagggccggcagttgcgcaag
aatcagcagctgcagaggtttatccagtggctaaaagaggcagaagaggagtcatctgaa
gatgactga
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