Niveispirillum cyanobacteriorum: C0V82_17840
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Entry
C0V82_17840 CDS
T05262
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ncb
Niveispirillum cyanobacteriorum
Pathway
ncb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ncb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0V82_17840 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncb03019
]
C0V82_17840 (recQ)
03400 DNA repair and recombination proteins [BR:
ncb03400
]
C0V82_17840 (recQ)
Enzymes [BR:
ncb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0V82_17840 (recQ)
Messenger RNA biogenesis [BR:
ncb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0V82_17840 (recQ)
DNA repair and recombination proteins [BR:
ncb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C0V82_17840 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF6972
Motif
Other DBs
NCBI-ProteinID:
AUN32256
UniProt:
A0A2K9NI44
LinkDB
All DBs
Position
eg_2:438734..440602
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AA seq
622 aa
AA seq
DB search
MPDALAETFALSPLEAAQDALRKVWGYPAFRGMQADIVEHVVAGGDALVLMPTGGGKSLC
YQIPALVRPGVGIVVSPLIALMRDQVDALRQLGVRAAYLNSTLDWREAQEVERACERGDL
DLLYVAPERLVTPRFLELLDRSRIALFALDEAHCVSQWGHDFRPEYLQLSILHEKFPDVP
RVALTATADAQTRTDIAARLGLTDARLFLASFDRPNITYRILPKDQERRQLLDFLRRRPE
DAGVVYCLSRGKVDAIAQYLAEQGVDALPYHAGLDPATRQANQDRFIKGEGVVMVATVAF
GMGIDKPNVRFVVHMDPPRSLEAYYQETGRAGRDGLPAEALMLYGFADVVQMQMMVESSD
SPPAFKRTERQKLEALLGFCETARCRRQTLLTYFDEEYPKPCGKCDTCFQPVETYDGTVV
AQKALSAVYRTGQRFGVGHLVDVLRGVATDKVTEKGHDKLKTFGCGTELGKQEWHSVFRQ
LVANGLLCADPEGHGGLILTETATAVLKSQEVVRLRRDPAAEAKGKGKASWSGGSSSSKP
KTSTADLSPADDTLWHALKALRLELAREQGVPPYVIFHDATLMEMVREKPTDLDELGTLQ
GVGSRKLERYGEYFLDVILTHS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacgcccttgccgagactttcgccctgtcgccgctggaggcggcccaggatgcg
ttgcgcaaggtctggggctatccggcctttcgcggcatgcaggccgacattgtcgagcat
gtcgtggctgggggggatgcccttgtcctgatgccgacgggcgggggcaaatcgctctgc
tatcagatcccggccctggtgcggcccggtgtcgggattgtcgtttcgccccttatcgcc
ctgatgcgcgatcaggtggatgcgttgcgacagttgggcgtgcgcgccgcctacctgaac
tccacgctggactggcgggaagcacaggaggtggagcgggcgtgtgagcgaggtgatctg
gacctgctgtatgtcgcgcccgaacggctggtgacaccgcgcttcctagaactgctggac
cggtcgcgcatcgcactgttcgccctggacgaggcgcattgcgtcagccagtggggccat
gatttccgcccggaatatctccagctctccatactgcacgagaaattcccggatgtgccg
cgcgtggccctgacggcgacggcggacgcacagacgcgtaccgacatcgcggcccgcctg
ggcctgaccgacgcccggctgttcctggccagcttcgaccggcccaacatcacctatcgt
atcctgcccaaggaccaggaacgccggcagctgctggatttcctacgccgccggccagag
gatgcgggcgtggtctattgcctttccagaggcaaagtggacgccatcgcacaatatctg
gccgaacagggggtggacgcgctcccctatcatgccggtttggaccccgccacgcggcag
gccaatcaggaccggttcatcaagggcgagggcgtggtgatggtcgccaccgtcgcgttt
ggcatgggtatcgacaagccgaatgtacgcttcgtggtccatatggaccccccgcgatcc
cttgaggcctattaccaggagacgggtcgcgccgggcgcgacggtcttccggcggaagct
ctgatgctctacggctttgccgacgttgtgcagatgcagatgatggtggaatcatctgac
agcccgcccgctttcaagcgcacggagcggcagaagctggaggcgctgctgggcttctgc
gagaccgcgcgctgccggcggcaaacgctgctgacctatttcgatgaggaatatcccaag
ccctgcggcaagtgcgacacctgtttccagcccgtcgaaacctatgacgggacggtggtg
gcgcagaaggcgctgtcagccgtataccgcaccgggcagcggttcggggtgggccatctg
gtcgatgtgctgcgtggggttgccaccgacaaggtgacagaaaagggccatgacaagctg
aagacctttggctgcggcacggaactgggcaagcaggaatggcatagcgttttccgccaa
ctggtggccaacggcctgctttgtgccgatccggaggggcatggcggcctgatcctgacg
gagacggcgactgccgtcctgaaaagccaggaagtcgtgcgtctgcgccgtgatccggcg
gcggaggccaaggggaagggcaaggcttcctggtcgggcggtagcagttcgtcgaagccg
aagacatccaccgccgacctgtcacccgccgacgatacgctttggcacgcattgaaggcg
ctgcgcctggaactggcgcgggagcagggggttccaccctatgtcatcttccatgacgca
acattgatggaaatggtgcgggagaagccgaccgacctggacgagttgggcaccctgcag
ggcgtaggttcgcgcaagctagagcgttatggcgaatatttcctggatgtgatcctgacg
cattcataa
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