Notothenia coriiceps (black rockcod): 104941112
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Entry
104941112 CDS
T04920
Name
(RefSeq) high affinity choline transporter 1-like isoform X1
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ncc
Notothenia coriiceps (black rockcod)
Pathway
ncc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ncc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104941112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncc02000
]
104941112
Transporters [BR:
ncc02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
104941112
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
104941112
NCBI-ProteinID:
XP_010764460
UniProt:
A0A6I9MSQ9
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All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MTLNVPGLVVMAVFYLLILGIGIWASFRSKKQEKKCTGNGMEITLLAGRNINLLVGIFTL
TATWVGGGFILGIAEAAYNPTLGAVWALMPVPYVLTFFLGGFFFARPMRENRYVTMMDPF
QQKYGNVMSSLLILPALVADVLWVARTLVSLGGTMSVILDLPYLYSIIISSVVAIVYTLM
GGLYSVAYTDVIQLILIFFSLWLCVPFLMTNPHSLDISLTAYNQTFQAPWVGTVELDQAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCFASSGFCLVLGIPSILVGAVAAST
DWNSTAYGLPTPYERNQAGSILPIALQYLTPPYISIIGIGAVAAAVMSSMDSALLSSASL
FSSNIYKNILRKQASDSEMQWVIRISVVVVGLAGTGLTFLDSSVLVFWLVGVDMSYTIMF
PQLVCVLFFKVSNAYGALIGFMMGIILRFMSGEPLIGLPPLIEFPGYRLDAEGKQTQYFP
FRTAIMMLSLFSILLFSWLAAIIINKGLLPEKWDVFKINRKRKPSAGAAEAEKAKQAKEG
VSEAKQLLDNTTSF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgactctcaatgtgccgggtctggtggtgatggcagtattctacctgctgatcttgggt
ataggcatctgggcctcctttcgctccaagaagcaggaaaagaagtgcacaggaaatggc
atggagataacgctactggccgggcgcaacatcaacttgcttgttggcatcttcactctg
actgctacatgggtgggtggaggcttcatcctcggtatagctgaggcggcatacaacccc
acactaggcgcagtgtgggctctgatgcctgtgccttatgtcctgaccttcttcttaggt
gggtttttctttgccaggccaatgagggagaacagatatgtgacaatgatggaccctttc
cagcagaagtatgggaacgttatgagcagtttgctgatccttcccgctctagtggccgat
gttctatgggtggcgcgcacactcgtcagcctgggtggaacaatgagtgtgatcctggac
ctgccctacctctactccatcatcatctcctcagtggtggccatagtctacacactgatg
ggggggctctactctgtggcctacacagatgtaatccagctcatcctcatctttttcagt
ctgtggttgtgtgtccctttcctgatgacaaaccctcactctttggacatctcactgaca
gcctacaaccagaccttccaggctccctgggttggcacggtggaacttgatcaggccgga
aagtggtttgatgacttcatgctgctggctctgggtggtcttgcctaccaggcgttctac
caacgaatcctgtccgcttcatcttacacccaggctcaagtgacctgcttcgcctcttca
ggtttctgcctggtgcttggtatcccttccattctggtgggggctgtggctgcgtctaca
gactggaactcaaccgcctatggattgcccaccccatatgagcgcaaccaggcaggctcc
atcctccccatcgccctgcagtacctcacacccccatacatctccatcattggcattgga
gcagtagctgctgccgtcatgtcttccatggactcagctcttctgtcctccgcatcatta
ttttcctcaaatatctacaagaacatcctcagaaaacaggcgtcggacagtgagatgcag
tgggtgatccgtatctcggtggtggtggtgggtctggccggcactggcctcacctttctg
gacagcagcgtcctggtcttctggctggtgggcgtagatatgtcctacaccatcatgttc
ccacagctggtctgcgtcctcttcttcaaggtgtcaaatgcatatggagccctcattggc
ttcatgatgggaatcatcttaaggttcatgagtggtgagcccctcattggcctccctcct
ctcatcgagttccccggctaccgactggacgctgaaggaaagcaaacccagtacttcccc
tttcgcaccgctatcatgatgttgtcgctattttccatcctgctcttctcctggcttgca
gccatcatcatcaacaaaggtctgctgcccgagaaatgggatgtattcaagatcaatcgc
aagcgaaaaccatcagccggagctgctgaggccgagaaggccaagcaggctaaggaagga
gtctcagaggcaaagcagctactggacaataccaccagtttctga
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